Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC243772.1-201ENST00000451620 410 ntBASIC5.31□□□□□ -1.56
SOX1O00570 GSTA11P-201ENST00000452866 669 ntBASIC5.31□□□□□ -1.56
SOX1O00570 RPS27AP1-201ENST00000475545 471 ntBASIC5.31□□□□□ -1.56
SOX1O00570 AC026782.1-201ENST00000512952 449 ntBASIC5.31□□□□□ -1.56
SOX1O00570 RFPL4AP5-201ENST00000514977 504 ntBASIC5.31□□□□□ -1.56
SOX1O00570 RNU6-699P-201ENST00000517081 110 ntBASIC5.31□□□□□ -1.56
SOX1O00570 RNU6-685P-201ENST00000517088 95 ntBASIC5.31□□□□□ -1.56
SOX1O00570 RNU1-54P-201ENST00000517181 120 ntBASIC5.31□□□□□ -1.56
SOX1O00570 Y_RNA.721-201ENST00000517207 102 ntBASIC5.31□□□□□ -1.56
SOX1O00570 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.31□□□□□ -1.56
SOX1O00570 HMGN1P28-201ENST00000521340 364 ntBASIC5.31□□□□□ -1.56
SOX1O00570 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.31□□□□□ -1.56
SOX1O00570 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
SOX1O00570 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC5.31□□□□□ -1.56
SOX1O00570 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.31□□□□□ -1.56
SOX1O00570 AC124068.1-201ENST00000563131 678 ntBASIC5.31□□□□□ -1.56
SOX1O00570 AC008521.1-201ENST00000587471 187 ntBASIC5.31□□□□□ -1.56
SOX1O00570 AC104695.3-201ENST00000604052 296 ntBASIC5.31□□□□□ -1.56
SOX1O00570 AL591034.3-201ENST00000605511 685 ntBASIC5.31□□□□□ -1.56
SOX1O00570 AC069200.1-201ENST00000609511 323 ntBASIC5.31□□□□□ -1.56
SOX1O00570 FAM157A-202ENST00000615155 405 ntBASIC5.31□□□□□ -1.56
SOX1O00570 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.31□□□□□ -1.56
SOX1O00570 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC5.31□□□□□ -1.56
SOX1O00570 AL023881.1-201ENST00000621088 301 ntBASIC5.31□□□□□ -1.56
SOX1O00570 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
SOX1O00570 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
SOX1O00570 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.31□□□□□ -1.56
SOX1O00570 RAD17P1-201ENST00000418130 2042 ntBASIC5.31□□□□□ -1.56
SOX1O00570 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.31□□□□□ -1.56
SOX1O00570 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
SOX1O00570 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.31□□□□□ -1.56
SOX1O00570 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
SOX1O00570 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SOX1O00570 AC005592.1-201ENST00000566527 1640 ntBASIC5.3□□□□□ -1.56
SOX1O00570 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SOX1O00570 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.3□□□□□ -1.56
SOX1O00570 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
SOX1O00570 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SOX1O00570 SAGE4P-201ENST00000442271 3381 ntBASIC5.3□□□□□ -1.56
SOX1O00570 XIAPP3-201ENST00000312918 795 ntBASIC5.3□□□□□ -1.56
SOX1O00570 SNORA63.1-201ENST00000362493 131 ntBASIC5.3□□□□□ -1.56
SOX1O00570 RNU6-1284P-201ENST00000363701 100 ntBASIC5.3□□□□□ -1.56
SOX1O00570 Y_RNA.399-201ENST00000383955 105 ntBASIC5.3□□□□□ -1.56
SOX1O00570 Y_RNA.404-201ENST00000383978 102 ntBASIC5.3□□□□□ -1.56
SOX1O00570 Y_RNA.496-201ENST00000384444 101 ntBASIC5.3□□□□□ -1.56
SOX1O00570 MIR483-201ENST00000385070 76 ntBASIC5.3□□□□□ -1.56
SOX1O00570 RNU6-754P-201ENST00000391166 107 ntBASIC5.3□□□□□ -1.56
SOX1O00570 Y_RNA.645-201ENST00000391229 102 ntBASIC5.3□□□□□ -1.56
SOX1O00570 AL583834.1-201ENST00000406943 343 ntBASIC5.3□□□□□ -1.56
SOX1O00570 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC5.3□□□□□ -1.56
SOX1O00570 RPL23AP69-201ENST00000431134 458 ntBASIC5.3□□□□□ -1.56
SOX1O00570 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.3□□□□□ -1.56
SOX1O00570 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.3□□□□□ -1.56
SOX1O00570 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC5.3□□□□□ -1.56
SOX1O00570 DYNLL1P5-201ENST00000467158 270 ntBASIC5.3□□□□□ -1.56
SOX1O00570 RN7SL303P-201ENST00000469773 251 ntBASIC5.3□□□□□ -1.56
SOX1O00570 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.3□□□□□ -1.56
SOX1O00570 AC087854.1-201ENST00000519706 414 ntBASIC5.3□□□□□ -1.56
SOX1O00570 IGLVIV-53-201ENST00000520107 367 ntBASIC5.3□□□□□ -1.56
SOX1O00570 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.3□□□□□ -1.56
SOX1O00570 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
SOX1O00570 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC5.3□□□□□ -1.56
SOX1O00570 AC090115.3-201ENST00000553218 849 ntBASIC5.3□□□□□ -1.56
SOX1O00570 MIR5692C1-201ENST00000585309 91 ntBASIC5.3□□□□□ -1.56
SOX1O00570 AC005357.1-201ENST00000588399 301 ntBASIC5.3□□□□□ -1.56
SOX1O00570 AC012468.1-201ENST00000604888 430 ntBASIC5.3□□□□□ -1.56
SOX1O00570 ATP1B3P1-201ENST00000605365 821 ntBASIC5.3□□□□□ -1.56
SOX1O00570 AC018889.1-201ENST00000605372 397 ntBASIC5.3□□□□□ -1.56
SOX1O00570 AC018462.2-201ENST00000605375 395 ntBASIC5.3□□□□□ -1.56
SOX1O00570 DLEU2_5.1-201ENST00000615567 84 ntBASIC5.3□□□□□ -1.56
SOX1O00570 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.3□□□□□ -1.56
SOX1O00570 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
SOX1O00570 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
SOX1O00570 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.3□□□□□ -1.56
SOX1O00570 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.3□□□□□ -1.56
SOX1O00570 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SOX1O00570 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC5.3□□□□□ -1.56
SOX1O00570 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.3□□□□□ -1.56
SOX1O00570 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.29□□□□□ -1.56
SOX1O00570 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SOX1O00570 AC032011.1-201ENST00000611703 1549 ntBASIC5.29□□□□□ -1.56
SOX1O00570 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.29□□□□□ -1.56
SOX1O00570 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
SOX1O00570 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
SOX1O00570 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SOX1O00570 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
SOX1O00570 Y_RNA.257-201ENST00000364596 102 ntBASIC5.29□□□□□ -1.56
SOX1O00570 RNU1-115P-201ENST00000365329 160 ntBASIC5.29□□□□□ -1.56
SOX1O00570 Y_RNA.389-201ENST00000383924 113 ntBASIC5.29□□□□□ -1.56
SOX1O00570 RNU6-26P-201ENST00000383985 107 ntBASIC5.29□□□□□ -1.56
SOX1O00570 Y_RNA.428-201ENST00000384078 102 ntBASIC5.29□□□□□ -1.56
SOX1O00570 SNORD56.6-201ENST00000384569 71 ntBASIC5.29□□□□□ -1.56
SOX1O00570 RNU4-70P-201ENST00000384579 139 ntBASIC5.29□□□□□ -1.56
SOX1O00570 SNORD70.1-201ENST00000391007 85 ntBASIC5.29□□□□□ -1.56
SOX1O00570 U3.29-201ENST00000391296 212 ntBASIC5.29□□□□□ -1.56
SOX1O00570 U3.30-201ENST00000391308 210 ntBASIC5.29□□□□□ -1.56
SOX1O00570 PTMAP2-201ENST00000397627 327 ntBASIC5.29□□□□□ -1.56
SOX1O00570 NDUFS5P1-201ENST00000405668 289 ntBASIC5.29□□□□□ -1.56
SOX1O00570 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC5.29□□□□□ -1.56
SOX1O00570 Y_RNA.594-201ENST00000410373 140 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms