Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 RPL21P2-201ENST00000440049 481 ntBASIC2.75□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC093155.1-201ENST00000440164 826 ntBASIC2.75□□□□□ -1.97
TMX2-CTNND1H3BSU7 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.75□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC004022.1-201ENST00000447766 1066 ntBASIC2.75□□□□□ -1.97
TMX2-CTNND1H3BSU7 AL162389.1-201ENST00000449233 177 ntBASIC2.75□□□□□ -1.97
TMX2-CTNND1H3BSU7 ZNF886P-201ENST00000450781 723 ntBASIC2.75□□□□□ -1.97
TMX2-CTNND1H3BSU7 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.75□□□□□ -1.97
TMX2-CTNND1H3BSU7 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC2.75□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC2.75□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.75□□□□□ -1.97
TMX2-CTNND1H3BSU7 RN7SKP132-201ENST00000516001 208 ntBASIC2.75□□□□□ -1.97
TMX2-CTNND1H3BSU7 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.75□□□□□ -1.97
TMX2-CTNND1H3BSU7 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC2.75□□□□□ -1.97
TMX2-CTNND1H3BSU7 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC2.75□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.75□□□□□ -1.97
TMX2-CTNND1H3BSU7 MIR3912-201ENST00000577566 105 ntBASIC2.75□□□□□ -1.97
TMX2-CTNND1H3BSU7 SNORD39.3-201ENST00000584451 71 ntBASIC2.75□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC015871.2-201ENST00000603605 948 ntBASIC2.75□□□□□ -1.97
TMX2-CTNND1H3BSU7 HSPE1P14-201ENST00000605812 302 ntBASIC2.75□□□□□ -1.97
TMX2-CTNND1H3BSU7 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC2.75□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC006386.1-201ENST00000619436 415 ntBASIC2.75□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC109454.4-201ENST00000623411 649 ntBASIC2.75□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC006963.1-201ENST00000624003 1052 ntBASIC2.75□□□□□ -1.97
TMX2-CTNND1H3BSU7 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.75□□□□□ -1.97
TMX2-CTNND1H3BSU7 AL359693.1-201ENST00000614959 2407 ntBASIC2.75□□□□□ -1.97
TMX2-CTNND1H3BSU7 AL672167.1-206ENST00000356293 943 ntBASIC2.74□□□□□ -1.97
TMX2-CTNND1H3BSU7 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
TMX2-CTNND1H3BSU7 RNU6-444P-201ENST00000383988 108 ntBASIC2.74□□□□□ -1.97
TMX2-CTNND1H3BSU7 AL360182.1-201ENST00000397433 468 ntBASIC2.74□□□□□ -1.97
TMX2-CTNND1H3BSU7 AL354719.1-201ENST00000406535 843 ntBASIC2.74□□□□□ -1.97
TMX2-CTNND1H3BSU7 AL592310.1-201ENST00000414330 671 ntBASIC2.74□□□□□ -1.97
TMX2-CTNND1H3BSU7 NUP35P2-201ENST00000416748 943 ntBASIC2.74□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC092634.6-201ENST00000418558 192 ntBASIC2.74□□□□□ -1.97
TMX2-CTNND1H3BSU7 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC2.74□□□□□ -1.97
TMX2-CTNND1H3BSU7 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC2.74□□□□□ -1.97
TMX2-CTNND1H3BSU7 RPL36AP6-201ENST00000435770 321 ntBASIC2.74□□□□□ -1.97
TMX2-CTNND1H3BSU7 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
TMX2-CTNND1H3BSU7 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC2.74□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC2.74□□□□□ -1.97
TMX2-CTNND1H3BSU7 Z77249.1-201ENST00000444622 1175 ntBASIC2.74□□□□□ -1.97
TMX2-CTNND1H3BSU7 RPL23AP20-201ENST00000447965 421 ntBASIC2.74□□□□□ -1.97
TMX2-CTNND1H3BSU7 RPL29P29-201ENST00000448725 423 ntBASIC2.74□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC093392.2-201ENST00000450682 337 ntBASIC2.74□□□□□ -1.97
TMX2-CTNND1H3BSU7 SSXP4-201ENST00000451349 245 ntBASIC2.74□□□□□ -1.97
TMX2-CTNND1H3BSU7 SNORD109B-201ENST00000458961 67 ntBASIC2.74□□□□□ -1.97
TMX2-CTNND1H3BSU7 SNORD109A-201ENST00000459128 67 ntBASIC2.74□□□□□ -1.97
TMX2-CTNND1H3BSU7 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.74□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC006445.2-201ENST00000510061 472 ntBASIC2.74□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC005351.1-201ENST00000511152 786 ntBASIC2.74□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC114781.4-201ENST00000513707 639 ntBASIC2.74□□□□□ -1.97
TMX2-CTNND1H3BSU7 RN7SKP234-201ENST00000517173 224 ntBASIC2.74□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC2.74□□□□□ -1.97
TMX2-CTNND1H3BSU7 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC2.74□□□□□ -1.97
TMX2-CTNND1H3BSU7 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC2.74□□□□□ -1.97
TMX2-CTNND1H3BSU7 AP000857.1-201ENST00000532151 543 ntBASIC2.74□□□□□ -1.97
TMX2-CTNND1H3BSU7 LRRC6P1-201ENST00000532188 885 ntBASIC2.74□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.74□□□□□ -1.97
TMX2-CTNND1H3BSU7 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC2.74□□□□□ -1.97
TMX2-CTNND1H3BSU7 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.74□□□□□ -1.97
TMX2-CTNND1H3BSU7 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.74□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC023813.2-201ENST00000564321 469 ntBASIC2.74□□□□□ -1.97
TMX2-CTNND1H3BSU7 MTCYBP28-201ENST00000566728 1132 ntBASIC2.74□□□□□ -1.97
TMX2-CTNND1H3BSU7 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
TMX2-CTNND1H3BSU7 MTCO3P13-201ENST00000577757 781 ntBASIC2.74□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.74□□□□□ -1.97
TMX2-CTNND1H3BSU7 AL391001.1-201ENST00000602747 715 ntBASIC2.74□□□□□ -1.97
TMX2-CTNND1H3BSU7 AP003973.1-201ENST00000604639 691 ntBASIC2.74□□□□□ -1.97
TMX2-CTNND1H3BSU7 AL450336.1-201ENST00000605180 586 ntBASIC2.74□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC034229.4-201ENST00000607861 441 ntBASIC2.74□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC013412.1-201ENST00000610687 192 ntBASIC2.74□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC024257.5-201ENST00000612739 531 ntBASIC2.74□□□□□ -1.97
TMX2-CTNND1H3BSU7 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.74□□□□□ -1.97
TMX2-CTNND1H3BSU7 AC090617.7-201ENST00000623952 126 ntBASIC2.74□□□□□ -1.97
TMX2-CTNND1H3BSU7 OR1S1-201ENST00000624470 978 ntBASIC2.74□□□□□ -1.97
TMX2-CTNND1H3BSU7 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.74□□□□□ -1.97
TMX2-CTNND1H3BSU7 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.74□□□□□ -1.97
TMX2-CTNND1H3BSU7 UGP2-231ENST00000627474 264 ntTSL 5 BASIC2.74□□□□□ -1.97
TMX2-CTNND1H3BSU7 IGHVIII-44-202ENST00000636235 289 ntBASIC2.74□□□□□ -1.97
TMX2-CTNND1H3BSU7 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
TMX2-CTNND1H3BSU7 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.74□□□□□ -1.97
TMX2-CTNND1H3BSU7 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.74□□□□□ -1.97
TMX2-CTNND1H3BSU7 MTND5P28-201ENST00000438005 1594 ntBASIC2.74□□□□□ -1.97
TMX2-CTNND1H3BSU7 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
TMX2-CTNND1H3BSU7 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.74□□□□□ -1.97
TMX2-CTNND1H3BSU7 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.73□□□□□ -1.97
TMX2-CTNND1H3BSU7 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.73□□□□□ -1.97
TMX2-CTNND1H3BSU7 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
TMX2-CTNND1H3BSU7 SNORA18.3-201ENST00000384122 132 ntBASIC2.73□□□□□ -1.97
TMX2-CTNND1H3BSU7 RNU6-906P-201ENST00000384700 70 ntBASIC2.73□□□□□ -1.97
TMX2-CTNND1H3BSU7 MIR887-201ENST00000401258 79 ntBASIC2.73□□□□□ -1.97
TMX2-CTNND1H3BSU7 BTBD10P2-201ENST00000404779 676 ntBASIC2.73□□□□□ -1.97
TMX2-CTNND1H3BSU7 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
TMX2-CTNND1H3BSU7 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.73□□□□□ -1.97
TMX2-CTNND1H3BSU7 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.73□□□□□ -1.97
TMX2-CTNND1H3BSU7 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.73□□□□□ -1.97
TMX2-CTNND1H3BSU7 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
TMX2-CTNND1H3BSU7 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.73□□□□□ -1.97
TMX2-CTNND1H3BSU7 MTCO1P3-201ENST00000429327 192 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms