Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 WARS-244ENST00000627608 123 ntTSL 5 BASIC1.87□□□□□ -2.11
TRAV4A0A0B4J268 CU459211.1-201ENST00000635667 749 ntBASIC1.87□□□□□ -2.11
TRAV4A0A0B4J268 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC1.87□□□□□ -2.11
TRAV4A0A0B4J268 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
TRAV4A0A0B4J268 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
TRAV4A0A0B4J268 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
TRAV4A0A0B4J268 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC1.86□□□□□ -2.11
TRAV4A0A0B4J268 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
TRAV4A0A0B4J268 DEFB108F-201ENST00000344638 222 ntBASIC1.86□□□□□ -2.11
TRAV4A0A0B4J268 RNU6-859P-201ENST00000362728 107 ntBASIC1.86□□□□□ -2.11
TRAV4A0A0B4J268 RNU6-40P-201ENST00000384254 107 ntBASIC1.86□□□□□ -2.11
TRAV4A0A0B4J268 MIR525-201ENST00000384978 85 ntBASIC1.86□□□□□ -2.11
TRAV4A0A0B4J268 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
TRAV4A0A0B4J268 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
TRAV4A0A0B4J268 RNA5SP210-201ENST00000391034 120 ntBASIC1.86□□□□□ -2.11
TRAV4A0A0B4J268 AL592148.1-201ENST00000413568 445 ntBASIC1.86□□□□□ -2.11
TRAV4A0A0B4J268 ZNF92P1Y-201ENST00000415010 1191 ntBASIC1.86□□□□□ -2.11
TRAV4A0A0B4J268 RPLP0P7-201ENST00000416050 667 ntBASIC1.86□□□□□ -2.11
TRAV4A0A0B4J268 AC009237.2-201ENST00000421358 284 ntBASIC1.86□□□□□ -2.11
TRAV4A0A0B4J268 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.86□□□□□ -2.11
TRAV4A0A0B4J268 AL714022.1-201ENST00000439897 151 ntBASIC1.86□□□□□ -2.11
TRAV4A0A0B4J268 AL121871.1-201ENST00000443413 436 ntBASIC1.86□□□□□ -2.11
TRAV4A0A0B4J268 COX6CP12-201ENST00000446748 202 ntBASIC1.86□□□□□ -2.11
TRAV4A0A0B4J268 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC1.86□□□□□ -2.11
TRAV4A0A0B4J268 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC1.86□□□□□ -2.11
TRAV4A0A0B4J268 RNU6-420P-201ENST00000458780 107 ntBASIC1.86□□□□□ -2.11
TRAV4A0A0B4J268 AL049714.1-201ENST00000466686 347 ntBASIC1.86□□□□□ -2.11
TRAV4A0A0B4J268 AC116337.2-201ENST00000477662 156 ntBASIC1.86□□□□□ -2.11
TRAV4A0A0B4J268 AC107222.1-201ENST00000510899 637 ntBASIC1.86□□□□□ -2.11
TRAV4A0A0B4J268 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC1.86□□□□□ -2.11
TRAV4A0A0B4J268 AC096725.1-201ENST00000514266 313 ntBASIC1.86□□□□□ -2.11
TRAV4A0A0B4J268 RNA5SP282-201ENST00000516355 108 ntBASIC1.86□□□□□ -2.11
TRAV4A0A0B4J268 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC1.86□□□□□ -2.11
TRAV4A0A0B4J268 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
TRAV4A0A0B4J268 DEFB108D-201ENST00000527787 222 ntBASIC1.86□□□□□ -2.11
TRAV4A0A0B4J268 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC1.86□□□□□ -2.11
TRAV4A0A0B4J268 AC007115.1-201ENST00000546853 234 ntBASIC1.86□□□□□ -2.11
TRAV4A0A0B4J268 AC123904.3-201ENST00000547218 814 ntBASIC1.86□□□□□ -2.11
TRAV4A0A0B4J268 AMZ2P1-203ENST00000565833 850 ntBASIC1.86□□□□□ -2.11
TRAV4A0A0B4J268 ATP5F1P7-201ENST00000567330 760 ntBASIC1.86□□□□□ -2.11
TRAV4A0A0B4J268 AL356280.1-201ENST00000603614 379 ntBASIC1.86□□□□□ -2.11
TRAV4A0A0B4J268 AL645944.1-201ENST00000603857 493 ntBASIC1.86□□□□□ -2.11
TRAV4A0A0B4J268 AC007619.2-201ENST00000605743 379 ntBASIC1.86□□□□□ -2.11
TRAV4A0A0B4J268 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
TRAV4A0A0B4J268 HMGB1P24-202ENST00000615653 685 ntBASIC1.86□□□□□ -2.11
TRAV4A0A0B4J268 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.86□□□□□ -2.11
TRAV4A0A0B4J268 AL137790.1-201ENST00000634283 177 ntBASIC1.86□□□□□ -2.11
TRAV4A0A0B4J268 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC1.85□□□□□ -2.11
TRAV4A0A0B4J268 AC009902.3-201ENST00000606235 2172 ntBASIC1.85□□□□□ -2.11
TRAV4A0A0B4J268 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
TRAV4A0A0B4J268 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
TRAV4A0A0B4J268 MDM4-202ENST00000367180 547 ntTSL 3 BASIC1.85□□□□□ -2.11
TRAV4A0A0B4J268 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
TRAV4A0A0B4J268 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC1.85□□□□□ -2.11
TRAV4A0A0B4J268 UBE2V1P11-201ENST00000411559 285 ntBASIC1.85□□□□□ -2.11
TRAV4A0A0B4J268 Z75741.2-201ENST00000417272 1167 ntBASIC1.85□□□□□ -2.11
TRAV4A0A0B4J268 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC1.85□□□□□ -2.11
TRAV4A0A0B4J268 AC006946.1-201ENST00000429106 328 ntBASIC1.85□□□□□ -2.11
TRAV4A0A0B4J268 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
TRAV4A0A0B4J268 AC107083.1-201ENST00000439643 279 ntBASIC1.85□□□□□ -2.11
TRAV4A0A0B4J268 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
TRAV4A0A0B4J268 MTCYBP3-201ENST00000445588 1137 ntBASIC1.85□□□□□ -2.11
TRAV4A0A0B4J268 DPPA3P1-201ENST00000448050 469 ntBASIC1.85□□□□□ -2.11
TRAV4A0A0B4J268 CACYBPP2-201ENST00000453625 678 ntBASIC1.85□□□□□ -2.11
TRAV4A0A0B4J268 RNU7-23P-201ENST00000459465 62 ntBASIC1.85□□□□□ -2.11
TRAV4A0A0B4J268 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC1.85□□□□□ -2.11
TRAV4A0A0B4J268 NAA50-206ENST00000493454 964 ntTSL 2 BASIC1.85□□□□□ -2.11
TRAV4A0A0B4J268 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.85□□□□□ -2.11
TRAV4A0A0B4J268 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
TRAV4A0A0B4J268 SETP12-201ENST00000514068 805 ntBASIC1.85□□□□□ -2.11
TRAV4A0A0B4J268 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC1.85□□□□□ -2.11
TRAV4A0A0B4J268 COX6CP8-201ENST00000522620 226 ntBASIC1.85□□□□□ -2.11
TRAV4A0A0B4J268 ATP5F1P5-201ENST00000526403 760 ntBASIC1.85□□□□□ -2.11
TRAV4A0A0B4J268 ZNF705CP-201ENST00000530515 889 ntBASIC1.85□□□□□ -2.11
TRAV4A0A0B4J268 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.85□□□□□ -2.11
TRAV4A0A0B4J268 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC1.85□□□□□ -2.11
TRAV4A0A0B4J268 MIR3921-201ENST00000577308 85 ntBASIC1.85□□□□□ -2.11
TRAV4A0A0B4J268 MIR3616-201ENST00000584070 92 ntBASIC1.85□□□□□ -2.11
TRAV4A0A0B4J268 AC097504.2-201ENST00000608088 454 ntBASIC1.85□□□□□ -2.11
TRAV4A0A0B4J268 AC245884.12-201ENST00000615364 59 ntBASIC1.85□□□□□ -2.11
TRAV4A0A0B4J268 AC009032.1-201ENST00000617574 431 ntBASIC1.85□□□□□ -2.11
TRAV4A0A0B4J268 AC090617.9-201ENST00000623751 147 ntBASIC1.85□□□□□ -2.11
TRAV4A0A0B4J268 AC091925.2-201ENST00000625059 256 ntBASIC1.85□□□□□ -2.11
TRAV4A0A0B4J268 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.85□□□□□ -2.11
TRAV4A0A0B4J268 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.85□□□□□ -2.11
TRAV4A0A0B4J268 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
TRAV4A0A0B4J268 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
TRAV4A0A0B4J268 AL137003.2-201ENST00000606924 2538 ntBASIC1.84□□□□□ -2.11
TRAV4A0A0B4J268 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.84□□□□□ -2.11
TRAV4A0A0B4J268 SNORD62.1-201ENST00000362541 86 ntBASIC1.84□□□□□ -2.11
TRAV4A0A0B4J268 SNORA38-201ENST00000363946 132 ntBASIC1.84□□□□□ -2.11
TRAV4A0A0B4J268 RNU6-7-201ENST00000364784 107 ntBASIC1.84□□□□□ -2.11
TRAV4A0A0B4J268 Y_RNA.333-201ENST00000365274 102 ntBASIC1.84□□□□□ -2.11
TRAV4A0A0B4J268 RNU6-8-201ENST00000365467 107 ntBASIC1.84□□□□□ -2.11
TRAV4A0A0B4J268 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
TRAV4A0A0B4J268 MIR128-1-201ENST00000384921 82 ntBASIC1.84□□□□□ -2.11
TRAV4A0A0B4J268 AL360182.1-201ENST00000397433 468 ntBASIC1.84□□□□□ -2.11
TRAV4A0A0B4J268 MIR1290-201ENST00000408735 78 ntBASIC1.84□□□□□ -2.11
TRAV4A0A0B4J268 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.84□□□□□ -2.11
TRAV4A0A0B4J268 AL513331.1-201ENST00000411908 397 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms