Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 IGHV3-29-201ENST00000604817 344 ntBASIC3.82□□□□□ -1.8
SNX9Q9Y5X1 AC092354.2-201ENST00000607786 514 ntBASIC3.82□□□□□ -1.8
SNX9Q9Y5X1 AC104073.3-201ENST00000610942 955 ntBASIC3.82□□□□□ -1.8
SNX9Q9Y5X1 AL357080.1-201ENST00000617394 239 ntBASIC3.82□□□□□ -1.8
SNX9Q9Y5X1 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.82□□□□□ -1.8
SNX9Q9Y5X1 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SNX9Q9Y5X1 AL365440.1-201ENST00000436135 2167 ntBASIC3.82□□□□□ -1.8
SNX9Q9Y5X1 AF127577.6-201ENST00000623352 2191 ntBASIC3.82□□□□□ -1.8
SNX9Q9Y5X1 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SNX9Q9Y5X1 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.81□□□□□ -1.8
SNX9Q9Y5X1 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SNX9Q9Y5X1 AC073073.2-201ENST00000609827 2578 ntBASIC3.81□□□□□ -1.8
SNX9Q9Y5X1 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SNX9Q9Y5X1 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SNX9Q9Y5X1 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SNX9Q9Y5X1 RNA5SP119-201ENST00000362715 117 ntBASIC3.81□□□□□ -1.8
SNX9Q9Y5X1 RNU5F-6P-201ENST00000362979 116 ntBASIC3.81□□□□□ -1.8
SNX9Q9Y5X1 SNORA51.2-201ENST00000364595 132 ntBASIC3.81□□□□□ -1.8
SNX9Q9Y5X1 RNU6-343P-201ENST00000364709 104 ntBASIC3.81□□□□□ -1.8
SNX9Q9Y5X1 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.81□□□□□ -1.8
SNX9Q9Y5X1 RNU6-1119P-201ENST00000384349 108 ntBASIC3.81□□□□□ -1.8
SNX9Q9Y5X1 RPS7P13-201ENST00000413955 498 ntBASIC3.81□□□□□ -1.8
SNX9Q9Y5X1 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.81□□□□□ -1.8
SNX9Q9Y5X1 LSM1P1-201ENST00000438629 273 ntBASIC3.81□□□□□ -1.8
SNX9Q9Y5X1 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.81□□□□□ -1.8
SNX9Q9Y5X1 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.81□□□□□ -1.8
SNX9Q9Y5X1 ARPC3P5-201ENST00000448802 534 ntBASIC3.81□□□□□ -1.8
SNX9Q9Y5X1 PABPC1P3-201ENST00000469174 459 ntBASIC3.81□□□□□ -1.8
SNX9Q9Y5X1 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.81□□□□□ -1.8
SNX9Q9Y5X1 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.81□□□□□ -1.8
SNX9Q9Y5X1 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.81□□□□□ -1.8
SNX9Q9Y5X1 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.81□□□□□ -1.8
SNX9Q9Y5X1 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.81□□□□□ -1.8
SNX9Q9Y5X1 AC110768.1-201ENST00000509222 400 ntBASIC3.81□□□□□ -1.8
SNX9Q9Y5X1 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.81□□□□□ -1.8
SNX9Q9Y5X1 AC008489.1-201ENST00000524271 483 ntBASIC3.81□□□□□ -1.8
SNX9Q9Y5X1 AC103843.2-201ENST00000530523 682 ntBASIC3.81□□□□□ -1.8
SNX9Q9Y5X1 AC008127.2-201ENST00000549925 1075 ntBASIC3.81□□□□□ -1.8
SNX9Q9Y5X1 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.81□□□□□ -1.8
SNX9Q9Y5X1 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.81□□□□□ -1.8
SNX9Q9Y5X1 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.81□□□□□ -1.8
SNX9Q9Y5X1 AC053481.3-201ENST00000577881 843 ntBASIC3.81□□□□□ -1.8
SNX9Q9Y5X1 MIR548AB-201ENST00000584917 84 ntBASIC3.81□□□□□ -1.8
SNX9Q9Y5X1 AC080078.2-201ENST00000603766 501 ntBASIC3.81□□□□□ -1.8
SNX9Q9Y5X1 BCRP9-201ENST00000605312 388 ntBASIC3.81□□□□□ -1.8
SNX9Q9Y5X1 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SNX9Q9Y5X1 AP003355.3-201ENST00000623465 114 ntBASIC3.81□□□□□ -1.8
SNX9Q9Y5X1 AL392088.2-201ENST00000637607 285 ntBASIC3.81□□□□□ -1.8
SNX9Q9Y5X1 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
SNX9Q9Y5X1 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
SNX9Q9Y5X1 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SNX9Q9Y5X1 AL353746.1-201ENST00000566293 6881 ntBASIC3.81□□□□□ -1.8
SNX9Q9Y5X1 AL022578.1-201ENST00000439330 1433 ntBASIC3.8□□□□□ -1.8
SNX9Q9Y5X1 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.8□□□□□ -1.8
SNX9Q9Y5X1 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SNX9Q9Y5X1 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SNX9Q9Y5X1 AC116096.1-201ENST00000566804 2314 ntBASIC3.8□□□□□ -1.8
SNX9Q9Y5X1 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.8□□□□□ -1.8
SNX9Q9Y5X1 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
SNX9Q9Y5X1 RNU6-192P-201ENST00000391253 100 ntBASIC3.8□□□□□ -1.8
SNX9Q9Y5X1 PTMAP5-201ENST00000393073 333 ntBASIC3.8□□□□□ -1.8
SNX9Q9Y5X1 MTCYBP36-201ENST00000404146 440 ntBASIC3.8□□□□□ -1.8
SNX9Q9Y5X1 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SNX9Q9Y5X1 AL663109.1-201ENST00000411498 844 ntBASIC3.8□□□□□ -1.8
SNX9Q9Y5X1 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.8□□□□□ -1.8
SNX9Q9Y5X1 HMGB1P11-201ENST00000413899 637 ntBASIC3.8□□□□□ -1.8
SNX9Q9Y5X1 AC093578.1-201ENST00000415219 368 ntBASIC3.8□□□□□ -1.8
SNX9Q9Y5X1 CRYBB2P1-203ENST00000415709 538 ntBASIC3.8□□□□□ -1.8
SNX9Q9Y5X1 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.8□□□□□ -1.8
SNX9Q9Y5X1 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.8□□□□□ -1.8
SNX9Q9Y5X1 YME1L1P1-201ENST00000429435 297 ntBASIC3.8□□□□□ -1.8
SNX9Q9Y5X1 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.8□□□□□ -1.8
SNX9Q9Y5X1 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.8□□□□□ -1.8
SNX9Q9Y5X1 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.8□□□□□ -1.8
SNX9Q9Y5X1 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.8□□□□□ -1.8
SNX9Q9Y5X1 ELOCP30-201ENST00000447108 299 ntBASIC3.8□□□□□ -1.8
SNX9Q9Y5X1 TPT1P7-201ENST00000458300 517 ntBASIC3.8□□□□□ -1.8
SNX9Q9Y5X1 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SNX9Q9Y5X1 RNU6-579P-201ENST00000516879 102 ntBASIC3.8□□□□□ -1.8
SNX9Q9Y5X1 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.8□□□□□ -1.8
SNX9Q9Y5X1 CCNG2P1-201ENST00000549521 1000 ntBASIC3.8□□□□□ -1.8
SNX9Q9Y5X1 AC099489.2-201ENST00000574976 260 ntBASIC3.8□□□□□ -1.8
SNX9Q9Y5X1 AC015871.2-201ENST00000603605 948 ntBASIC3.8□□□□□ -1.8
SNX9Q9Y5X1 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.8□□□□□ -1.8
SNX9Q9Y5X1 MIR7851-201ENST00000610611 160 ntBASIC3.8□□□□□ -1.8
SNX9Q9Y5X1 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.8□□□□□ -1.8
SNX9Q9Y5X1 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.8□□□□□ -1.8
SNX9Q9Y5X1 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.8□□□□□ -1.8
SNX9Q9Y5X1 AC244258.1-201ENST00000637553 1071 ntBASIC3.8□□□□□ -1.8
SNX9Q9Y5X1 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
SNX9Q9Y5X1 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.8□□□□□ -1.8
SNX9Q9Y5X1 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
SNX9Q9Y5X1 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SNX9Q9Y5X1 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
SNX9Q9Y5X1 OTUD4P1-201ENST00000237841 3067 ntBASIC3.79□□□□□ -1.8
SNX9Q9Y5X1 MTND5P29-201ENST00000458676 1807 ntBASIC3.79□□□□□ -1.8
SNX9Q9Y5X1 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
SNX9Q9Y5X1 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
SNX9Q9Y5X1 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SNX9Q9Y5X1 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms