Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 AC010300.1-201ENST00000600671 5134 ntBASIC4.41□□□□□ -1.7
PCDHGA3Q9Y5H0 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.41□□□□□ -1.7
PCDHGA3Q9Y5H0 GABPAP-201ENST00000419271 1356 ntBASIC4.4□□□□□ -1.7
PCDHGA3Q9Y5H0 AC016588.2-201ENST00000632484 3021 ntBASIC4.4□□□□□ -1.7
PCDHGA3Q9Y5H0 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.4□□□□□ -1.7
PCDHGA3Q9Y5H0 AL137003.2-201ENST00000606924 2538 ntBASIC4.4□□□□□ -1.7
PCDHGA3Q9Y5H0 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
PCDHGA3Q9Y5H0 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
PCDHGA3Q9Y5H0 AC021146.4-201ENST00000309229 279 ntBASIC4.4□□□□□ -1.71
PCDHGA3Q9Y5H0 Y_RNA.159-201ENST00000363674 87 ntBASIC4.4□□□□□ -1.71
PCDHGA3Q9Y5H0 SNORA23-201ENST00000365128 182 ntBASIC4.4□□□□□ -1.71
PCDHGA3Q9Y5H0 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC4.4□□□□□ -1.71
PCDHGA3Q9Y5H0 RNU6-606P-201ENST00000384721 111 ntBASIC4.4□□□□□ -1.71
PCDHGA3Q9Y5H0 AC097374.1-203ENST00000400783 485 ntBASIC4.4□□□□□ -1.71
PCDHGA3Q9Y5H0 RPS3AP24-201ENST00000407896 734 ntBASIC4.4□□□□□ -1.71
PCDHGA3Q9Y5H0 MTND4LP11-201ENST00000422184 280 ntBASIC4.4□□□□□ -1.71
PCDHGA3Q9Y5H0 MTCO1P39-201ENST00000426148 480 ntBASIC4.4□□□□□ -1.71
PCDHGA3Q9Y5H0 USP9YP7-201ENST00000436723 430 ntBASIC4.4□□□□□ -1.71
PCDHGA3Q9Y5H0 USP9YP32-201ENST00000452432 430 ntBASIC4.4□□□□□ -1.71
PCDHGA3Q9Y5H0 RPS24P6-201ENST00000452670 400 ntBASIC4.4□□□□□ -1.71
PCDHGA3Q9Y5H0 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.4□□□□□ -1.71
PCDHGA3Q9Y5H0 snoU13.24-201ENST00000458998 104 ntBASIC4.4□□□□□ -1.71
PCDHGA3Q9Y5H0 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.4□□□□□ -1.71
PCDHGA3Q9Y5H0 RPL36AP51-201ENST00000487216 318 ntBASIC4.4□□□□□ -1.71
PCDHGA3Q9Y5H0 FCF1P3-201ENST00000496394 590 ntBASIC4.4□□□□□ -1.71
PCDHGA3Q9Y5H0 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.4□□□□□ -1.71
PCDHGA3Q9Y5H0 SCARNA24.1-201ENST00000516465 137 ntBASIC4.4□□□□□ -1.71
PCDHGA3Q9Y5H0 AC104383.1-201ENST00000530297 370 ntBASIC4.4□□□□□ -1.71
PCDHGA3Q9Y5H0 AC109635.4-202ENST00000531666 412 ntBASIC4.4□□□□□ -1.71
PCDHGA3Q9Y5H0 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.4□□□□□ -1.71
PCDHGA3Q9Y5H0 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.4□□□□□ -1.71
PCDHGA3Q9Y5H0 AC125611.2-201ENST00000551907 647 ntBASIC4.4□□□□□ -1.71
PCDHGA3Q9Y5H0 AC234778.2-201ENST00000566241 354 ntBASIC4.4□□□□□ -1.71
PCDHGA3Q9Y5H0 MTCO3P24-201ENST00000572729 782 ntBASIC4.4□□□□□ -1.71
PCDHGA3Q9Y5H0 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
PCDHGA3Q9Y5H0 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.4□□□□□ -1.71
PCDHGA3Q9Y5H0 SLC25A36P1-201ENST00000590111 465 ntBASIC4.4□□□□□ -1.71
PCDHGA3Q9Y5H0 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC4.4□□□□□ -1.71
PCDHGA3Q9Y5H0 AL020997.2-201ENST00000602607 184 ntBASIC4.4□□□□□ -1.71
PCDHGA3Q9Y5H0 AP002360.4-201ENST00000606980 481 ntBASIC4.4□□□□□ -1.71
PCDHGA3Q9Y5H0 AC008536.2-201ENST00000607284 349 ntBASIC4.4□□□□□ -1.71
PCDHGA3Q9Y5H0 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC4.4□□□□□ -1.71
PCDHGA3Q9Y5H0 AL353748.2-201ENST00000622148 471 ntBASIC4.4□□□□□ -1.71
PCDHGA3Q9Y5H0 AL136313.1-201ENST00000624804 202 ntBASIC4.4□□□□□ -1.71
PCDHGA3Q9Y5H0 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC4.4□□□□□ -1.71
PCDHGA3Q9Y5H0 AC055839.1-201ENST00000634467 498 ntBASIC4.4□□□□□ -1.71
PCDHGA3Q9Y5H0 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHGA3Q9Y5H0 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHGA3Q9Y5H0 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.4□□□□□ -1.71
PCDHGA3Q9Y5H0 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.4□□□□□ -1.71
PCDHGA3Q9Y5H0 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.4□□□□□ -1.71
PCDHGA3Q9Y5H0 AC116096.1-201ENST00000566804 2314 ntBASIC4.4□□□□□ -1.71
PCDHGA3Q9Y5H0 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
PCDHGA3Q9Y5H0 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.4□□□□□ -1.71
PCDHGA3Q9Y5H0 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHGA3Q9Y5H0 EXOC5P1-201ENST00000510543 1969 ntBASIC4.4□□□□□ -1.71
PCDHGA3Q9Y5H0 AC092326.2-201ENST00000624772 1561 ntBASIC4.4□□□□□ -1.71
PCDHGA3Q9Y5H0 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHGA3Q9Y5H0 AL157700.1-201ENST00000561973 1432 ntBASIC4.39□□□□□ -1.71
PCDHGA3Q9Y5H0 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.39□□□□□ -1.71
PCDHGA3Q9Y5H0 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
PCDHGA3Q9Y5H0 RNU6-960P-201ENST00000364056 120 ntBASIC4.39□□□□□ -1.71
PCDHGA3Q9Y5H0 RNU6-76P-201ENST00000384060 104 ntBASIC4.39□□□□□ -1.71
PCDHGA3Q9Y5H0 RNU6-629P-201ENST00000384061 103 ntBASIC4.39□□□□□ -1.71
PCDHGA3Q9Y5H0 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHGA3Q9Y5H0 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDHGA3Q9Y5H0 MRPL50P2-201ENST00000416821 482 ntBASIC4.39□□□□□ -1.71
PCDHGA3Q9Y5H0 SSXP9-201ENST00000417503 292 ntBASIC4.39□□□□□ -1.71
PCDHGA3Q9Y5H0 HMGB3P20-201ENST00000417997 600 ntBASIC4.39□□□□□ -1.71
PCDHGA3Q9Y5H0 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDHGA3Q9Y5H0 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDHGA3Q9Y5H0 MTND1P2-201ENST00000430604 821 ntBASIC4.39□□□□□ -1.71
PCDHGA3Q9Y5H0 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDHGA3Q9Y5H0 AC004938.1-201ENST00000438468 308 ntBASIC4.39□□□□□ -1.71
PCDHGA3Q9Y5H0 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.39□□□□□ -1.71
PCDHGA3Q9Y5H0 RN7SL303P-201ENST00000469773 251 ntBASIC4.39□□□□□ -1.71
PCDHGA3Q9Y5H0 AC010285.1-201ENST00000470580 392 ntBASIC4.39□□□□□ -1.71
PCDHGA3Q9Y5H0 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
PCDHGA3Q9Y5H0 AC126389.1-201ENST00000477436 290 ntBASIC4.39□□□□□ -1.71
PCDHGA3Q9Y5H0 AC078817.1-201ENST00000492623 435 ntBASIC4.39□□□□□ -1.71
PCDHGA3Q9Y5H0 RN7SL810P-201ENST00000493031 276 ntBASIC4.39□□□□□ -1.71
PCDHGA3Q9Y5H0 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC4.39□□□□□ -1.71
PCDHGA3Q9Y5H0 AC025445.1-201ENST00000502728 300 ntBASIC4.39□□□□□ -1.71
PCDHGA3Q9Y5H0 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDHGA3Q9Y5H0 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4.39□□□□□ -1.71
PCDHGA3Q9Y5H0 AC090281.1-201ENST00000523019 276 ntBASIC4.39□□□□□ -1.71
PCDHGA3Q9Y5H0 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHGA3Q9Y5H0 RPS3AP4-201ENST00000555161 764 ntBASIC4.39□□□□□ -1.71
PCDHGA3Q9Y5H0 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDHGA3Q9Y5H0 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDHGA3Q9Y5H0 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDHGA3Q9Y5H0 RPL23AP84-201ENST00000571193 464 ntBASIC4.39□□□□□ -1.71
PCDHGA3Q9Y5H0 MIR3939-201ENST00000582614 106 ntBASIC4.39□□□□□ -1.71
PCDHGA3Q9Y5H0 MIR4293-201ENST00000584305 78 ntBASIC4.39□□□□□ -1.71
PCDHGA3Q9Y5H0 AL162413.1-201ENST00000603198 110 ntBASIC4.39□□□□□ -1.71
PCDHGA3Q9Y5H0 AC008638.3-201ENST00000603341 463 ntBASIC4.39□□□□□ -1.71
PCDHGA3Q9Y5H0 AC007621.1-201ENST00000604544 437 ntBASIC4.39□□□□□ -1.71
PCDHGA3Q9Y5H0 AC004067.1-201ENST00000608733 700 ntBASIC4.39□□□□□ -1.71
PCDHGA3Q9Y5H0 AC130324.3-201ENST00000614165 542 ntBASIC4.39□□□□□ -1.71
PCDHGA3Q9Y5H0 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms