Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 MIR6721-201ENST00000617181 87 ntBASIC6.41□□□□□ -1.38
PCDHGA4Q9Y5G9 snoU18.1-201ENST00000629629 71 ntBASIC6.41□□□□□ -1.38
PCDHGA4Q9Y5G9 AC110491.1-201ENST00000562191 2010 ntBASIC6.41□□□□□ -1.38
PCDHGA4Q9Y5G9 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
PCDHGA4Q9Y5G9 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.41□□□□□ -1.38
PCDHGA4Q9Y5G9 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
PCDHGA4Q9Y5G9 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PCDHGA4Q9Y5G9 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.41□□□□□ -1.38
PCDHGA4Q9Y5G9 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
PCDHGA4Q9Y5G9 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
PCDHGA4Q9Y5G9 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC6.4□□□□□ -1.38
PCDHGA4Q9Y5G9 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
PCDHGA4Q9Y5G9 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC6.4□□□□□ -1.38
PCDHGA4Q9Y5G9 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
PCDHGA4Q9Y5G9 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.4□□□□□ -1.38
PCDHGA4Q9Y5G9 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
PCDHGA4Q9Y5G9 LINC01613-201ENST00000561476 2780 ntBASIC6.4□□□□□ -1.38
PCDHGA4Q9Y5G9 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
PCDHGA4Q9Y5G9 MIR133A2-201ENST00000347538 102 ntBASIC6.4□□□□□ -1.38
PCDHGA4Q9Y5G9 Y_RNA.230-201ENST00000364348 109 ntBASIC6.4□□□□□ -1.38
PCDHGA4Q9Y5G9 RNA5SP433-201ENST00000364491 114 ntBASIC6.4□□□□□ -1.38
PCDHGA4Q9Y5G9 RN7SKP124-201ENST00000364730 341 ntBASIC6.4□□□□□ -1.38
PCDHGA4Q9Y5G9 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.4□□□□□ -1.38
PCDHGA4Q9Y5G9 AL592148.1-201ENST00000413568 445 ntBASIC6.4□□□□□ -1.38
PCDHGA4Q9Y5G9 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.4□□□□□ -1.38
PCDHGA4Q9Y5G9 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC6.4□□□□□ -1.38
PCDHGA4Q9Y5G9 AL451062.2-201ENST00000427515 271 ntBASIC6.4□□□□□ -1.38
PCDHGA4Q9Y5G9 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC6.4□□□□□ -1.38
PCDHGA4Q9Y5G9 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC6.4□□□□□ -1.38
PCDHGA4Q9Y5G9 AL390198.2-201ENST00000510553 222 ntBASIC6.4□□□□□ -1.38
PCDHGA4Q9Y5G9 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.4□□□□□ -1.38
PCDHGA4Q9Y5G9 RNU6-1315P-201ENST00000517187 99 ntBASIC6.4□□□□□ -1.38
PCDHGA4Q9Y5G9 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC6.4□□□□□ -1.38
PCDHGA4Q9Y5G9 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC6.4□□□□□ -1.38
PCDHGA4Q9Y5G9 MIR1273C-201ENST00000578669 77 ntBASIC6.4□□□□□ -1.38
PCDHGA4Q9Y5G9 AC023575.1-201ENST00000580510 358 ntBASIC6.4□□□□□ -1.38
PCDHGA4Q9Y5G9 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC6.4□□□□□ -1.38
PCDHGA4Q9Y5G9 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC6.4□□□□□ -1.38
PCDHGA4Q9Y5G9 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.4□□□□□ -1.38
PCDHGA4Q9Y5G9 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
PCDHGA4Q9Y5G9 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
PCDHGA4Q9Y5G9 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
PCDHGA4Q9Y5G9 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
PCDHGA4Q9Y5G9 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
PCDHGA4Q9Y5G9 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
PCDHGA4Q9Y5G9 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
PCDHGA4Q9Y5G9 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHGA4Q9Y5G9 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHGA4Q9Y5G9 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
PCDHGA4Q9Y5G9 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHGA4Q9Y5G9 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHGA4Q9Y5G9 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHGA4Q9Y5G9 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
PCDHGA4Q9Y5G9 RNA5SP435-201ENST00000364044 108 ntBASIC6.39□□□□□ -1.39
PCDHGA4Q9Y5G9 RNU6-275P-201ENST00000364910 107 ntBASIC6.39□□□□□ -1.39
PCDHGA4Q9Y5G9 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHGA4Q9Y5G9 Y_RNA.420-201ENST00000384043 110 ntBASIC6.39□□□□□ -1.39
PCDHGA4Q9Y5G9 RNU6-20P-201ENST00000384106 107 ntBASIC6.39□□□□□ -1.39
PCDHGA4Q9Y5G9 RNU6-17P-201ENST00000384245 107 ntBASIC6.39□□□□□ -1.39
PCDHGA4Q9Y5G9 RNU6-18P-201ENST00000384527 107 ntBASIC6.39□□□□□ -1.39
PCDHGA4Q9Y5G9 AC005522.1-201ENST00000395416 346 ntBASIC6.39□□□□□ -1.39
PCDHGA4Q9Y5G9 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC6.39□□□□□ -1.39
PCDHGA4Q9Y5G9 PPP1R11P2-201ENST00000423543 382 ntBASIC6.39□□□□□ -1.39
PCDHGA4Q9Y5G9 AP000907.1-201ENST00000428428 510 ntBASIC6.39□□□□□ -1.39
PCDHGA4Q9Y5G9 AC090774.1-201ENST00000435925 246 ntBASIC6.39□□□□□ -1.39
PCDHGA4Q9Y5G9 RN7SL362P-201ENST00000494228 267 ntBASIC6.39□□□□□ -1.39
PCDHGA4Q9Y5G9 RAC1P5-201ENST00000512182 576 ntBASIC6.39□□□□□ -1.39
PCDHGA4Q9Y5G9 DEFB131C-201ENST00000528817 165 ntBASIC6.39□□□□□ -1.39
PCDHGA4Q9Y5G9 AC024940.3-201ENST00000538551 316 ntBASIC6.39□□□□□ -1.39
PCDHGA4Q9Y5G9 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC6.39□□□□□ -1.39
PCDHGA4Q9Y5G9 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.39□□□□□ -1.39
PCDHGA4Q9Y5G9 AP003115.1-201ENST00000569849 463 ntBASIC6.39□□□□□ -1.39
PCDHGA4Q9Y5G9 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC6.39□□□□□ -1.39
PCDHGA4Q9Y5G9 KLKP1-201ENST00000595979 403 ntBASIC6.39□□□□□ -1.39
PCDHGA4Q9Y5G9 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.39□□□□□ -1.39
PCDHGA4Q9Y5G9 MIR6862-1-201ENST00000613016 70 ntBASIC6.39□□□□□ -1.39
PCDHGA4Q9Y5G9 MIR6862-2-201ENST00000614755 70 ntBASIC6.39□□□□□ -1.39
PCDHGA4Q9Y5G9 uc_338.31-201ENST00000615595 186 ntBASIC6.39□□□□□ -1.39
PCDHGA4Q9Y5G9 Six3os1_4.1-201ENST00000615706 324 ntBASIC6.39□□□□□ -1.39
PCDHGA4Q9Y5G9 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC6.39□□□□□ -1.39
PCDHGA4Q9Y5G9 AC022400.9-201ENST00000623633 273 ntBASIC6.39□□□□□ -1.39
PCDHGA4Q9Y5G9 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC6.39□□□□□ -1.39
PCDHGA4Q9Y5G9 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC6.39□□□□□ -1.39
PCDHGA4Q9Y5G9 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.39□□□□□ -1.39
PCDHGA4Q9Y5G9 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.39□□□□□ -1.39
PCDHGA4Q9Y5G9 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHGA4Q9Y5G9 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHGA4Q9Y5G9 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHGA4Q9Y5G9 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.39□□□□□ -1.39
PCDHGA4Q9Y5G9 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC6.39□□□□□ -1.39
PCDHGA4Q9Y5G9 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
PCDHGA4Q9Y5G9 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHGA4Q9Y5G9 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHGA4Q9Y5G9 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHGA4Q9Y5G9 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHGA4Q9Y5G9 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHGA4Q9Y5G9 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHGA4Q9Y5G9 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.38□□□□□ -1.39
PCDHGA4Q9Y5G9 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
PCDHGA4Q9Y5G9 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms