Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 MIR3200-201ENST00000580767 85 ntBASIC1.9□□□□□ -2.11
HHLA3Q9XRX5 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC1.9□□□□□ -2.11
HHLA3Q9XRX5 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC1.9□□□□□ -2.11
HHLA3Q9XRX5 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC1.9□□□□□ -2.11
HHLA3Q9XRX5 ZNF92P2-201ENST00000600543 1059 ntBASIC1.9□□□□□ -2.11
HHLA3Q9XRX5 DLEU2_6.1-201ENST00000610536 112 ntBASIC1.9□□□□□ -2.11
HHLA3Q9XRX5 AL138880.2-201ENST00000616214 239 ntBASIC1.9□□□□□ -2.11
HHLA3Q9XRX5 VN1R7P-201ENST00000619242 903 ntBASIC1.9□□□□□ -2.11
HHLA3Q9XRX5 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
HHLA3Q9XRX5 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC1.9□□□□□ -2.11
HHLA3Q9XRX5 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC1.9□□□□□ -2.11
HHLA3Q9XRX5 ZNF663P-202ENST00000641770 1131 ntBASIC1.9□□□□□ -2.11
HHLA3Q9XRX5 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
HHLA3Q9XRX5 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC1.9□□□□□ -2.11
HHLA3Q9XRX5 AC093536.2-201ENST00000565257 1406 ntBASIC1.9□□□□□ -2.11
HHLA3Q9XRX5 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
HHLA3Q9XRX5 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
HHLA3Q9XRX5 MTND4P21-201ENST00000453886 1357 ntBASIC1.89□□□□□ -2.11
HHLA3Q9XRX5 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC1.89□□□□□ -2.11
HHLA3Q9XRX5 TAB3P1-202ENST00000452645 1634 ntBASIC1.89□□□□□ -2.11
HHLA3Q9XRX5 FRG1BP-201ENST00000278882 761 ntBASIC1.89□□□□□ -2.11
HHLA3Q9XRX5 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
HHLA3Q9XRX5 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
HHLA3Q9XRX5 RNU5D-1-201ENST00000363299 116 ntBASIC1.89□□□□□ -2.11
HHLA3Q9XRX5 RNU6-115P-201ENST00000364310 107 ntBASIC1.89□□□□□ -2.11
HHLA3Q9XRX5 RNU1-112P-201ENST00000364401 164 ntBASIC1.89□□□□□ -2.11
HHLA3Q9XRX5 RNU1-100P-201ENST00000365255 165 ntBASIC1.89□□□□□ -2.11
HHLA3Q9XRX5 RNU6-650P-201ENST00000365658 111 ntBASIC1.89□□□□□ -2.11
HHLA3Q9XRX5 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC1.89□□□□□ -2.11
HHLA3Q9XRX5 OR1L1-202ENST00000373686 1083 ntBASIC1.89□□□□□ -2.11
HHLA3Q9XRX5 SNORA51.6-201ENST00000384151 125 ntBASIC1.89□□□□□ -2.11
HHLA3Q9XRX5 SNORD116-23-201ENST00000384645 92 ntBASIC1.89□□□□□ -2.11
HHLA3Q9XRX5 SNORA1.3-201ENST00000384676 136 ntBASIC1.89□□□□□ -2.11
HHLA3Q9XRX5 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
HHLA3Q9XRX5 AL133384.1-201ENST00000412744 351 ntBASIC1.89□□□□□ -2.11
HHLA3Q9XRX5 FCF1P2-201ENST00000415284 583 ntBASIC1.89□□□□□ -2.11
HHLA3Q9XRX5 AL513477.1-202ENST00000417061 214 ntBASIC1.89□□□□□ -2.11
HHLA3Q9XRX5 AC246680.2-201ENST00000422106 389 ntBASIC1.89□□□□□ -2.11
HHLA3Q9XRX5 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC1.89□□□□□ -2.11
HHLA3Q9XRX5 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC1.89□□□□□ -2.11
HHLA3Q9XRX5 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC1.89□□□□□ -2.11
HHLA3Q9XRX5 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC1.89□□□□□ -2.11
HHLA3Q9XRX5 AL512661.1-201ENST00000434586 1253 ntBASIC1.89□□□□□ -2.11
HHLA3Q9XRX5 AC105272.1-201ENST00000438604 198 ntBASIC1.89□□□□□ -2.11
HHLA3Q9XRX5 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC1.89□□□□□ -2.11
HHLA3Q9XRX5 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
HHLA3Q9XRX5 HSFY3P-201ENST00000444242 1191 ntBASIC1.89□□□□□ -2.11
HHLA3Q9XRX5 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.89□□□□□ -2.11
HHLA3Q9XRX5 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC1.89□□□□□ -2.11
HHLA3Q9XRX5 AC135721.1-201ENST00000497954 479 ntBASIC1.89□□□□□ -2.11
HHLA3Q9XRX5 AC084024.2-201ENST00000503480 791 ntBASIC1.89□□□□□ -2.11
HHLA3Q9XRX5 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC1.89□□□□□ -2.11
HHLA3Q9XRX5 AC107222.1-201ENST00000510899 637 ntBASIC1.89□□□□□ -2.11
HHLA3Q9XRX5 SNORA70.16-201ENST00000516390 95 ntBASIC1.89□□□□□ -2.11
HHLA3Q9XRX5 RN7SKP40-201ENST00000517211 242 ntBASIC1.89□□□□□ -2.11
HHLA3Q9XRX5 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC1.89□□□□□ -2.11
HHLA3Q9XRX5 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC1.89□□□□□ -2.11
HHLA3Q9XRX5 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC1.89□□□□□ -2.11
HHLA3Q9XRX5 COX6CP8-201ENST00000522620 226 ntBASIC1.89□□□□□ -2.11
HHLA3Q9XRX5 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC1.89□□□□□ -2.11
HHLA3Q9XRX5 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC1.89□□□□□ -2.11
HHLA3Q9XRX5 MTCO1P40-201ENST00000574371 625 ntBASIC1.89□□□□□ -2.11
HHLA3Q9XRX5 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC1.89□□□□□ -2.11
HHLA3Q9XRX5 LARP7P3-201ENST00000579888 337 ntBASIC1.89□□□□□ -2.11
HHLA3Q9XRX5 MIR4635-201ENST00000583759 79 ntBASIC1.89□□□□□ -2.11
HHLA3Q9XRX5 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC1.89□□□□□ -2.11
HHLA3Q9XRX5 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC1.89□□□□□ -2.11
HHLA3Q9XRX5 AC011890.2-201ENST00000613393 294 ntBASIC1.89□□□□□ -2.11
HHLA3Q9XRX5 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.89□□□□□ -2.11
HHLA3Q9XRX5 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
HHLA3Q9XRX5 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
HHLA3Q9XRX5 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.89□□□□□ -2.11
HHLA3Q9XRX5 RNU6-251P-201ENST00000363235 104 ntBASIC1.88□□□□□ -2.11
HHLA3Q9XRX5 RNA5SP210-201ENST00000391034 120 ntBASIC1.88□□□□□ -2.11
HHLA3Q9XRX5 AL024474.1-201ENST00000404655 591 ntBASIC1.88□□□□□ -2.11
HHLA3Q9XRX5 AL139098.1-201ENST00000407291 389 ntBASIC1.88□□□□□ -2.11
HHLA3Q9XRX5 Z92545.1-201ENST00000411782 234 ntBASIC1.88□□□□□ -2.11
HHLA3Q9XRX5 AL592148.1-201ENST00000413568 445 ntBASIC1.88□□□□□ -2.11
HHLA3Q9XRX5 AL357078.2-201ENST00000416486 427 ntBASIC1.88□□□□□ -2.11
HHLA3Q9XRX5 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.88□□□□□ -2.11
HHLA3Q9XRX5 RPL7P30-201ENST00000420888 709 ntBASIC1.88□□□□□ -2.11
HHLA3Q9XRX5 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC1.88□□□□□ -2.11
HHLA3Q9XRX5 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC1.88□□□□□ -2.11
HHLA3Q9XRX5 RSL24D1P8-201ENST00000434442 492 ntBASIC1.88□□□□□ -2.11
HHLA3Q9XRX5 AC112220.1-201ENST00000434628 355 ntBASIC1.88□□□□□ -2.11
HHLA3Q9XRX5 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC1.88□□□□□ -2.11
HHLA3Q9XRX5 AC107083.1-201ENST00000439643 279 ntBASIC1.88□□□□□ -2.11
HHLA3Q9XRX5 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC1.88□□□□□ -2.11
HHLA3Q9XRX5 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.88□□□□□ -2.11
HHLA3Q9XRX5 AL589880.1-201ENST00000448271 287 ntBASIC1.88□□□□□ -2.11
HHLA3Q9XRX5 AL096803.2-201ENST00000450032 677 ntBASIC1.88□□□□□ -2.11
HHLA3Q9XRX5 SNRPGP6-201ENST00000451124 220 ntBASIC1.88□□□□□ -2.11
HHLA3Q9XRX5 AC234775.1-201ENST00000454247 670 ntBASIC1.88□□□□□ -2.11
HHLA3Q9XRX5 RNU7-140P-201ENST00000459546 60 ntBASIC1.88□□□□□ -2.11
HHLA3Q9XRX5 SETP11-201ENST00000473027 690 ntBASIC1.88□□□□□ -2.11
HHLA3Q9XRX5 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.88□□□□□ -2.11
HHLA3Q9XRX5 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
HHLA3Q9XRX5 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC1.88□□□□□ -2.11
HHLA3Q9XRX5 AC048346.1-201ENST00000510247 144 ntBASIC1.88□□□□□ -2.11
HHLA3Q9XRX5 RAC1P5-201ENST00000512182 576 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms