Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 AC023043.3-201ENST00000593113 385 ntBASIC3.31□□□□□ -1.88
SMC3Q9UQE7 AC006539.2-201ENST00000601729 572 ntBASIC3.31□□□□□ -1.88
SMC3Q9UQE7 YPEL5P2-201ENST00000605553 359 ntBASIC3.31□□□□□ -1.88
SMC3Q9UQE7 AL592148.2-201ENST00000612210 372 ntBASIC3.31□□□□□ -1.88
SMC3Q9UQE7 MIR6733-201ENST00000635723 61 ntBASIC3.31□□□□□ -1.88
SMC3Q9UQE7 MAPK10-266ENST00000641066 6555 ntBASIC3.31□□□□□ -1.88
SMC3Q9UQE7 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
SMC3Q9UQE7 AC000403.1-201ENST00000613696 3585 ntBASIC3.3□□□□□ -1.88
SMC3Q9UQE7 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.3□□□□□ -1.88
SMC3Q9UQE7 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.3□□□□□ -1.88
SMC3Q9UQE7 RNA5SP374-201ENST00000362939 125 ntBASIC3.3□□□□□ -1.88
SMC3Q9UQE7 MIR122-201ENST00000385044 85 ntBASIC3.3□□□□□ -1.88
SMC3Q9UQE7 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.3□□□□□ -1.88
SMC3Q9UQE7 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.3□□□□□ -1.88
SMC3Q9UQE7 BOLA3P4-201ENST00000418151 400 ntBASIC3.3□□□□□ -1.88
SMC3Q9UQE7 AL449283.1-202ENST00000418249 604 ntBASIC3.3□□□□□ -1.88
SMC3Q9UQE7 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.3□□□□□ -1.88
SMC3Q9UQE7 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.3□□□□□ -1.88
SMC3Q9UQE7 MUPP-201ENST00000438111 566 ntBASIC3.3□□□□□ -1.88
SMC3Q9UQE7 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.3□□□□□ -1.88
SMC3Q9UQE7 RPL39P40-201ENST00000445481 146 ntBASIC3.3□□□□□ -1.88
SMC3Q9UQE7 AC112492.1-201ENST00000449607 712 ntBASIC3.3□□□□□ -1.88
SMC3Q9UQE7 NIPA2P5-201ENST00000452282 464 ntBASIC3.3□□□□□ -1.88
SMC3Q9UQE7 AC103975.1-201ENST00000482506 483 ntBASIC3.3□□□□□ -1.88
SMC3Q9UQE7 AIG1P1-201ENST00000503376 148 ntBASIC3.3□□□□□ -1.88
SMC3Q9UQE7 SLC25A15P5-201ENST00000508033 253 ntBASIC3.3□□□□□ -1.88
SMC3Q9UQE7 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.3□□□□□ -1.88
SMC3Q9UQE7 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.3□□□□□ -1.88
SMC3Q9UQE7 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC3.3□□□□□ -1.88
SMC3Q9UQE7 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
SMC3Q9UQE7 AP005205.1-201ENST00000563503 508 ntBASIC3.3□□□□□ -1.88
SMC3Q9UQE7 MIR3944-201ENST00000581277 108 ntBASIC3.3□□□□□ -1.88
SMC3Q9UQE7 MIR3605-201ENST00000583214 100 ntBASIC3.3□□□□□ -1.88
SMC3Q9UQE7 AL158050.2-201ENST00000605336 568 ntBASIC3.3□□□□□ -1.88
SMC3Q9UQE7 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
SMC3Q9UQE7 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.3□□□□□ -1.88
SMC3Q9UQE7 AC091925.2-201ENST00000625059 256 ntBASIC3.3□□□□□ -1.88
SMC3Q9UQE7 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.3□□□□□ -1.88
SMC3Q9UQE7 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.3□□□□□ -1.88
SMC3Q9UQE7 AC096644.4-201ENST00000563417 2912 ntBASIC3.3□□□□□ -1.88
SMC3Q9UQE7 AC026241.1-201ENST00000517873 2142 ntBASIC3.29□□□□□ -1.88
SMC3Q9UQE7 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
SMC3Q9UQE7 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SMC3Q9UQE7 GDI2P1-201ENST00000429312 1336 ntBASIC3.29□□□□□ -1.88
SMC3Q9UQE7 RNU6-492P-201ENST00000363035 104 ntBASIC3.29□□□□□ -1.88
SMC3Q9UQE7 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
SMC3Q9UQE7 RNU6-851P-201ENST00000384565 107 ntBASIC3.29□□□□□ -1.88
SMC3Q9UQE7 MIR34B-201ENST00000385076 84 ntBASIC3.29□□□□□ -1.88
SMC3Q9UQE7 AL512633.1-201ENST00000399931 655 ntBASIC3.29□□□□□ -1.88
SMC3Q9UQE7 AL136372.1-201ENST00000403060 228 ntBASIC3.29□□□□□ -1.88
SMC3Q9UQE7 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.29□□□□□ -1.88
SMC3Q9UQE7 USP9YP21-201ENST00000420603 432 ntBASIC3.29□□□□□ -1.88
SMC3Q9UQE7 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.29□□□□□ -1.88
SMC3Q9UQE7 AL645937.1-202ENST00000421799 937 ntBASIC3.29□□□□□ -1.88
SMC3Q9UQE7 AL513043.1-201ENST00000439124 535 ntBASIC3.29□□□□□ -1.88
SMC3Q9UQE7 MTCYBP42-201ENST00000444653 1130 ntBASIC3.29□□□□□ -1.88
SMC3Q9UQE7 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.29□□□□□ -1.88
SMC3Q9UQE7 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SMC3Q9UQE7 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.29□□□□□ -1.88
SMC3Q9UQE7 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.29□□□□□ -1.88
SMC3Q9UQE7 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SMC3Q9UQE7 AC093752.1-206ENST00000511823 336 ntBASIC3.29□□□□□ -1.88
SMC3Q9UQE7 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SMC3Q9UQE7 RNU6-1028P-201ENST00000517164 93 ntBASIC3.29□□□□□ -1.88
SMC3Q9UQE7 AP002404.1-201ENST00000532005 451 ntBASIC3.29□□□□□ -1.88
SMC3Q9UQE7 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.29□□□□□ -1.88
SMC3Q9UQE7 AL133271.1-201ENST00000538229 291 ntBASIC3.29□□□□□ -1.88
SMC3Q9UQE7 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.29□□□□□ -1.88
SMC3Q9UQE7 MED28P6-201ENST00000558776 231 ntBASIC3.29□□□□□ -1.88
SMC3Q9UQE7 H3F3AP1-201ENST00000559984 334 ntBASIC3.29□□□□□ -1.88
SMC3Q9UQE7 MIR4429-201ENST00000580105 73 ntBASIC3.29□□□□□ -1.88
SMC3Q9UQE7 ZNF861P-201ENST00000588126 639 ntBASIC3.29□□□□□ -1.88
SMC3Q9UQE7 AC093673.2-201ENST00000609674 331 ntBASIC3.29□□□□□ -1.88
SMC3Q9UQE7 AL133445.2-201ENST00000611191 527 ntBASIC3.29□□□□□ -1.88
SMC3Q9UQE7 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.29□□□□□ -1.88
SMC3Q9UQE7 AL049777.1-201ENST00000622740 518 ntBASIC3.29□□□□□ -1.88
SMC3Q9UQE7 AL157770.1-201ENST00000623049 439 ntBASIC3.29□□□□□ -1.88
SMC3Q9UQE7 AC004808.1-201ENST00000627671 721 ntBASIC3.29□□□□□ -1.88
SMC3Q9UQE7 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
SMC3Q9UQE7 AL355596.1-201ENST00000565399 3996 ntBASIC3.29□□□□□ -1.88
SMC3Q9UQE7 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.29□□□□□ -1.88
SMC3Q9UQE7 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.29□□□□□ -1.88
SMC3Q9UQE7 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.29□□□□□ -1.88
SMC3Q9UQE7 AL513185.3-201ENST00000433335 1300 ntBASIC3.28□□□□□ -1.88
SMC3Q9UQE7 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SMC3Q9UQE7 VTRNA1-1-201ENST00000363120 99 ntBASIC3.28□□□□□ -1.88
SMC3Q9UQE7 RNU6-1180P-201ENST00000364935 107 ntBASIC3.28□□□□□ -1.88
SMC3Q9UQE7 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.28□□□□□ -1.88
SMC3Q9UQE7 SNORD51-201ENST00000384320 80 ntBASIC3.28□□□□□ -1.88
SMC3Q9UQE7 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.28□□□□□ -1.88
SMC3Q9UQE7 AC092634.6-201ENST00000418558 192 ntBASIC3.28□□□□□ -1.88
SMC3Q9UQE7 KRR1P1-201ENST00000419430 803 ntBASIC3.28□□□□□ -1.88
SMC3Q9UQE7 AL137014.1-201ENST00000420490 1226 ntBASIC3.28□□□□□ -1.88
SMC3Q9UQE7 MTCO3P1-205ENST00000422088 832 ntBASIC3.28□□□□□ -1.88
SMC3Q9UQE7 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.28□□□□□ -1.88
SMC3Q9UQE7 MTCO1P48-201ENST00000448024 1096 ntBASIC3.28□□□□□ -1.88
SMC3Q9UQE7 COX6CP18-201ENST00000448769 222 ntBASIC3.28□□□□□ -1.88
SMC3Q9UQE7 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.28□□□□□ -1.88
SMC3Q9UQE7 BX510359.1-201ENST00000456973 237 ntBASIC3.28□□□□□ -1.88
SMC3Q9UQE7 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms