Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 RPS29P11-201ENST00000496507 171 ntBASIC0.88□□□□□ -2.27
MACF1Q9UPN3 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.88□□□□□ -2.27
MACF1Q9UPN3 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC0.88□□□□□ -2.27
MACF1Q9UPN3 AL591516.1-201ENST00000611326 274 ntBASIC0.88□□□□□ -2.27
MACF1Q9UPN3 MIR8081-201ENST00000611533 95 ntBASIC0.88□□□□□ -2.27
MACF1Q9UPN3 SNORD114-27-201ENST00000363766 70 ntBASIC0.88□□□□□ -2.27
MACF1Q9UPN3 MDM4-202ENST00000367180 547 ntTSL 3 BASIC0.88□□□□□ -2.27
MACF1Q9UPN3 YPEL5P1-201ENST00000419731 367 ntBASIC0.88□□□□□ -2.27
MACF1Q9UPN3 GTF2IP23-201ENST00000423746 351 ntBASIC0.88□□□□□ -2.27
MACF1Q9UPN3 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC0.88□□□□□ -2.27
MACF1Q9UPN3 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
MACF1Q9UPN3 PROS2P-201ENST00000474651 1951 ntBASIC0.88□□□□□ -2.27
MACF1Q9UPN3 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC0.87□□□□□ -2.27
MACF1Q9UPN3 Y_RNA.582-201ENST00000391023 95 ntBASIC0.87□□□□□ -2.27
MACF1Q9UPN3 MED14P1-201ENST00000430517 648 ntBASIC0.87□□□□□ -2.27
MACF1Q9UPN3 AL353813.1-201ENST00000440700 253 ntBASIC0.87□□□□□ -2.27
MACF1Q9UPN3 AC034222.1-201ENST00000494052 532 ntBASIC0.87□□□□□ -2.27
MACF1Q9UPN3 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC0.87□□□□□ -2.27
MACF1Q9UPN3 MIR5007-201ENST00000583098 95 ntBASIC0.87□□□□□ -2.27
MACF1Q9UPN3 AC098848.2-201ENST00000588023 330 ntBASIC0.87□□□□□ -2.27
MACF1Q9UPN3 AC068620.3-201ENST00000602749 560 ntBASIC0.87□□□□□ -2.27
MACF1Q9UPN3 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
MACF1Q9UPN3 AP002907.1-201ENST00000606361 1430 ntBASIC0.87□□□□□ -2.27
MACF1Q9UPN3 RALGAPA1P1-201ENST00000443361 6232 ntBASIC0.87□□□□□ -2.27
MACF1Q9UPN3 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC0.87□□□□□ -2.27
MACF1Q9UPN3 SNORA25.6-201ENST00000364121 118 ntBASIC0.87□□□□□ -2.27
MACF1Q9UPN3 AL136133.1-201ENST00000413694 376 ntBASIC0.87□□□□□ -2.27
MACF1Q9UPN3 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC0.87□□□□□ -2.27
MACF1Q9UPN3 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC0.87□□□□□ -2.27
MACF1Q9UPN3 AC011352.3-201ENST00000505162 593 ntBASIC0.87□□□□□ -2.27
MACF1Q9UPN3 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC0.87□□□□□ -2.27
MACF1Q9UPN3 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
MACF1Q9UPN3 AC090286.3-201ENST00000573133 187 ntBASIC0.87□□□□□ -2.27
MACF1Q9UPN3 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC0.87□□□□□ -2.27
MACF1Q9UPN3 MIR4472-2-201ENST00000582069 67 ntBASIC0.87□□□□□ -2.27
MACF1Q9UPN3 FRG1DP-201ENST00000635586 771 ntBASIC0.87□□□□□ -2.27
MACF1Q9UPN3 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
MACF1Q9UPN3 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
MACF1Q9UPN3 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.87□□□□□ -2.27
MACF1Q9UPN3 RNU6-405P-201ENST00000516637 110 ntBASIC0.87□□□□□ -2.27
MACF1Q9UPN3 RNU6-467P-201ENST00000517027 110 ntBASIC0.87□□□□□ -2.27
MACF1Q9UPN3 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC0.87□□□□□ -2.27
MACF1Q9UPN3 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC0.87□□□□□ -2.27
MACF1Q9UPN3 AC005332.5-201ENST00000591222 2919 ntBASIC0.87□□□□□ -2.27
MACF1Q9UPN3 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
MACF1Q9UPN3 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC0.87□□□□□ -2.27
MACF1Q9UPN3 AL118496.1-201ENST00000440201 1812 ntBASIC0.87□□□□□ -2.27
MACF1Q9UPN3 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
MACF1Q9UPN3 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC0.87□□□□□ -2.27
MACF1Q9UPN3 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC0.87□□□□□ -2.27
MACF1Q9UPN3 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
MACF1Q9UPN3 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC0.87□□□□□ -2.27
MACF1Q9UPN3 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC0.87□□□□□ -2.27
MACF1Q9UPN3 CACYBPP1-201ENST00000438592 684 ntBASIC0.87□□□□□ -2.27
MACF1Q9UPN3 HAUS1P1-201ENST00000505275 832 ntBASIC0.87□□□□□ -2.27
MACF1Q9UPN3 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC0.87□□□□□ -2.27
MACF1Q9UPN3 MIR4421-201ENST00000578133 69 ntBASIC0.87□□□□□ -2.27
MACF1Q9UPN3 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC0.87□□□□□ -2.27
MACF1Q9UPN3 AL079343.1-201ENST00000572358 1771 ntBASIC0.87□□□□□ -2.27
MACF1Q9UPN3 MTND4P12-201ENST00000498999 1377 ntBASIC0.87□□□□□ -2.27
MACF1Q9UPN3 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC0.87□□□□□ -2.27
MACF1Q9UPN3 AC018630.2-201ENST00000534866 2403 ntBASIC0.87□□□□□ -2.27
MACF1Q9UPN3 RNU6-112P-201ENST00000363599 104 ntBASIC0.87□□□□□ -2.27
MACF1Q9UPN3 ATG3P1-201ENST00000419507 911 ntBASIC0.87□□□□□ -2.27
MACF1Q9UPN3 BNIP3P2-201ENST00000441221 577 ntBASIC0.87□□□□□ -2.27
MACF1Q9UPN3 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC0.87□□□□□ -2.27
MACF1Q9UPN3 RNA5SP436-201ENST00000516020 115 ntBASIC0.87□□□□□ -2.27
MACF1Q9UPN3 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC0.87□□□□□ -2.27
MACF1Q9UPN3 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC0.87□□□□□ -2.27
MACF1Q9UPN3 AL391834.1-201ENST00000609609 560 ntBASIC0.87□□□□□ -2.27
MACF1Q9UPN3 AC012640.5-201ENST00000623897 319 ntBASIC0.87□□□□□ -2.27
MACF1Q9UPN3 AC010680.1-201ENST00000590024 3590 ntBASIC0.87□□□□□ -2.27
MACF1Q9UPN3 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC0.87□□□□□ -2.27
MACF1Q9UPN3 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC0.87□□□□□ -2.27
MACF1Q9UPN3 AL138787.1-202ENST00000437804 898 ntBASIC0.87□□□□□ -2.27
MACF1Q9UPN3 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC0.87□□□□□ -2.27
MACF1Q9UPN3 RPL9P9-202ENST00000466501 579 ntBASIC0.87□□□□□ -2.27
MACF1Q9UPN3 XKRY-201ENST00000510392 1100 ntBASIC0.87□□□□□ -2.27
MACF1Q9UPN3 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC0.87□□□□□ -2.27
MACF1Q9UPN3 IGKV2D-23-201ENST00000518179 286 ntBASIC0.87□□□□□ -2.27
MACF1Q9UPN3 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC0.87□□□□□ -2.27
MACF1Q9UPN3 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
MACF1Q9UPN3 RNU6-288P-201ENST00000363690 104 ntBASIC0.86□□□□□ -2.27
MACF1Q9UPN3 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC0.86□□□□□ -2.27
MACF1Q9UPN3 MRPS36P1-201ENST00000421291 307 ntBASIC0.86□□□□□ -2.27
MACF1Q9UPN3 AL358453.1-201ENST00000422522 250 ntBASIC0.86□□□□□ -2.27
MACF1Q9UPN3 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC0.86□□□□□ -2.27
MACF1Q9UPN3 VDAC1P3-201ENST00000434069 851 ntBASIC0.86□□□□□ -2.27
MACF1Q9UPN3 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC0.86□□□□□ -2.27
MACF1Q9UPN3 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC0.86□□□□□ -2.27
MACF1Q9UPN3 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC0.86□□□□□ -2.27
MACF1Q9UPN3 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
MACF1Q9UPN3 SNORA67.5-201ENST00000391036 107 ntBASIC0.86□□□□□ -2.27
MACF1Q9UPN3 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC0.86□□□□□ -2.27
MACF1Q9UPN3 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC0.86□□□□□ -2.27
MACF1Q9UPN3 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC0.86□□□□□ -2.27
MACF1Q9UPN3 SUB1P4-201ENST00000566062 339 ntBASIC0.86□□□□□ -2.27
MACF1Q9UPN3 AC135178.6-201ENST00000605314 398 ntBASIC0.86□□□□□ -2.27
MACF1Q9UPN3 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC0.86□□□□□ -2.27
MACF1Q9UPN3 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms