Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 PDSS1P1-201ENST00000422953 1114 ntBASIC5.31□□□□□ -1.56
DDX41Q9UJV9 AL732292.1-201ENST00000426692 226 ntBASIC5.31□□□□□ -1.56
DDX41Q9UJV9 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC5.31□□□□□ -1.56
DDX41Q9UJV9 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC5.31□□□□□ -1.56
DDX41Q9UJV9 RPL36AP53-201ENST00000432891 316 ntBASIC5.31□□□□□ -1.56
DDX41Q9UJV9 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC5.31□□□□□ -1.56
DDX41Q9UJV9 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.31□□□□□ -1.56
DDX41Q9UJV9 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC5.31□□□□□ -1.56
DDX41Q9UJV9 AL162389.1-201ENST00000449233 177 ntBASIC5.31□□□□□ -1.56
DDX41Q9UJV9 RPS23P7-201ENST00000466210 444 ntBASIC5.31□□□□□ -1.56
DDX41Q9UJV9 AC026979.1-201ENST00000492525 396 ntBASIC5.31□□□□□ -1.56
DDX41Q9UJV9 NIPA2P2-201ENST00000496376 1083 ntBASIC5.31□□□□□ -1.56
DDX41Q9UJV9 EIF4EP3-201ENST00000498782 656 ntBASIC5.31□□□□□ -1.56
DDX41Q9UJV9 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.31□□□□□ -1.56
DDX41Q9UJV9 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC5.31□□□□□ -1.56
DDX41Q9UJV9 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC5.31□□□□□ -1.56
DDX41Q9UJV9 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC5.31□□□□□ -1.56
DDX41Q9UJV9 MYL12AP1-201ENST00000518490 515 ntBASIC5.31□□□□□ -1.56
DDX41Q9UJV9 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC5.31□□□□□ -1.56
DDX41Q9UJV9 RAB11AP2-201ENST00000545905 639 ntBASIC5.31□□□□□ -1.56
DDX41Q9UJV9 DYNLL1P4-201ENST00000549314 266 ntBASIC5.31□□□□□ -1.56
DDX41Q9UJV9 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC5.31□□□□□ -1.56
DDX41Q9UJV9 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC5.31□□□□□ -1.56
DDX41Q9UJV9 MIR4293-201ENST00000584305 78 ntBASIC5.31□□□□□ -1.56
DDX41Q9UJV9 AC005261.5-201ENST00000596280 355 ntBASIC5.31□□□□□ -1.56
DDX41Q9UJV9 AL670379.6-201ENST00000603753 252 ntBASIC5.31□□□□□ -1.56
DDX41Q9UJV9 AL670379.11-201ENST00000604059 253 ntBASIC5.31□□□□□ -1.56
DDX41Q9UJV9 AC008162.1-201ENST00000604718 254 ntBASIC5.31□□□□□ -1.56
DDX41Q9UJV9 AL670379.1-201ENST00000604752 252 ntBASIC5.31□□□□□ -1.56
DDX41Q9UJV9 AL670379.5-201ENST00000605253 252 ntBASIC5.31□□□□□ -1.56
DDX41Q9UJV9 AL670379.12-201ENST00000605291 253 ntBASIC5.31□□□□□ -1.56
DDX41Q9UJV9 AL670379.8-201ENST00000605353 252 ntBASIC5.31□□□□□ -1.56
DDX41Q9UJV9 AL670379.7-201ENST00000605823 252 ntBASIC5.31□□□□□ -1.56
DDX41Q9UJV9 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.31□□□□□ -1.56
DDX41Q9UJV9 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC5.31□□□□□ -1.56
DDX41Q9UJV9 AC100810.6-201ENST00000638068 285 ntBASIC5.31□□□□□ -1.56
DDX41Q9UJV9 AC090337.1-201ENST00000579651 2074 ntBASIC5.31□□□□□ -1.56
DDX41Q9UJV9 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
DDX41Q9UJV9 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.31□□□□□ -1.56
DDX41Q9UJV9 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
DDX41Q9UJV9 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
DDX41Q9UJV9 AL356489.2-201ENST00000566968 3528 ntBASIC5.31□□□□□ -1.56
DDX41Q9UJV9 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
DDX41Q9UJV9 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC5.31□□□□□ -1.56
DDX41Q9UJV9 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.31□□□□□ -1.56
DDX41Q9UJV9 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
DDX41Q9UJV9 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
DDX41Q9UJV9 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
DDX41Q9UJV9 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
DDX41Q9UJV9 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
DDX41Q9UJV9 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
DDX41Q9UJV9 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
DDX41Q9UJV9 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
DDX41Q9UJV9 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
DDX41Q9UJV9 RPL32P3-201ENST00000359025 275 ntBASIC5.3□□□□□ -1.56
DDX41Q9UJV9 RNU6-960P-201ENST00000364056 120 ntBASIC5.3□□□□□ -1.56
DDX41Q9UJV9 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
DDX41Q9UJV9 AL590762.2-201ENST00000395798 571 ntBASIC5.3□□□□□ -1.56
DDX41Q9UJV9 SNORA11-201ENST00000408789 128 ntBASIC5.3□□□□□ -1.56
DDX41Q9UJV9 MTCYBP8-201ENST00000422855 651 ntBASIC5.3□□□□□ -1.56
DDX41Q9UJV9 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.3□□□□□ -1.56
DDX41Q9UJV9 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.3□□□□□ -1.56
DDX41Q9UJV9 MTCO3P45-201ENST00000443036 613 ntBASIC5.3□□□□□ -1.56
DDX41Q9UJV9 TDGF1P1-201ENST00000445734 527 ntBASIC5.3□□□□□ -1.56
DDX41Q9UJV9 H2AFZP5-201ENST00000446960 382 ntBASIC5.3□□□□□ -1.56
DDX41Q9UJV9 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC5.3□□□□□ -1.56
DDX41Q9UJV9 RPS29P15-201ENST00000458329 171 ntBASIC5.3□□□□□ -1.56
DDX41Q9UJV9 AC079804.1-201ENST00000461922 436 ntBASIC5.3□□□□□ -1.56
DDX41Q9UJV9 AC008481.1-201ENST00000463278 396 ntBASIC5.3□□□□□ -1.56
DDX41Q9UJV9 MRPS17P3-201ENST00000465453 385 ntBASIC5.3□□□□□ -1.56
DDX41Q9UJV9 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC5.3□□□□□ -1.56
DDX41Q9UJV9 RNU4ATAC8P-201ENST00000516196 109 ntBASIC5.3□□□□□ -1.56
DDX41Q9UJV9 RNU6-1092P-201ENST00000516955 87 ntBASIC5.3□□□□□ -1.56
DDX41Q9UJV9 RNA5SP503-201ENST00000517047 117 ntBASIC5.3□□□□□ -1.56
DDX41Q9UJV9 OR5AL2P-201ENST00000532185 920 ntBASIC5.3□□□□□ -1.56
DDX41Q9UJV9 BNIP3P6-201ENST00000549284 499 ntBASIC5.3□□□□□ -1.56
DDX41Q9UJV9 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC5.3□□□□□ -1.56
DDX41Q9UJV9 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC5.3□□□□□ -1.56
DDX41Q9UJV9 MIR4277-201ENST00000578298 84 ntBASIC5.3□□□□□ -1.56
DDX41Q9UJV9 MIR4775-201ENST00000581168 75 ntBASIC5.3□□□□□ -1.56
DDX41Q9UJV9 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
DDX41Q9UJV9 AP001029.3-201ENST00000588063 596 ntBASIC5.3□□□□□ -1.56
DDX41Q9UJV9 AF038458.1-201ENST00000588406 262 ntBASIC5.3□□□□□ -1.56
DDX41Q9UJV9 AC013553.2-201ENST00000604244 589 ntBASIC5.3□□□□□ -1.56
DDX41Q9UJV9 AL356218.2-201ENST00000605264 187 ntBASIC5.3□□□□□ -1.56
DDX41Q9UJV9 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC5.3□□□□□ -1.56
DDX41Q9UJV9 AC093913.1-201ENST00000614178 329 ntBASIC5.3□□□□□ -1.56
DDX41Q9UJV9 MIR7154-201ENST00000620673 73 ntBASIC5.3□□□□□ -1.56
DDX41Q9UJV9 AC006065.5-201ENST00000623427 349 ntBASIC5.3□□□□□ -1.56
DDX41Q9UJV9 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC5.3□□□□□ -1.56
DDX41Q9UJV9 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.3□□□□□ -1.56
DDX41Q9UJV9 EOGT-210ENST00000615922 1931 ntBASIC5.3□□□□□ -1.56
DDX41Q9UJV9 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC5.3□□□□□ -1.56
DDX41Q9UJV9 AC107068.1-201ENST00000563286 4218 ntBASIC5.3□□□□□ -1.56
DDX41Q9UJV9 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.3□□□□□ -1.56
DDX41Q9UJV9 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
DDX41Q9UJV9 OR56B2P-202ENST00000641377 2453 ntBASIC5.3□□□□□ -1.56
DDX41Q9UJV9 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
DDX41Q9UJV9 MTND4P14-201ENST00000435799 1354 ntBASIC5.29□□□□□ -1.56
DDX41Q9UJV9 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms