Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AP003117.2-201ENST00000606010 545 ntBASIC3.72□□□□□ -1.81
SIX4Q9UIU6 AC105429.2-201ENST00000610567 517 ntBASIC3.72□□□□□ -1.81
SIX4Q9UIU6 Z99129.1-201ENST00000612510 255 ntBASIC3.72□□□□□ -1.81
SIX4Q9UIU6 AC009318.4-201ENST00000620496 486 ntBASIC3.72□□□□□ -1.81
SIX4Q9UIU6 AL359740.1-201ENST00000624340 592 ntBASIC3.72□□□□□ -1.81
SIX4Q9UIU6 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.72□□□□□ -1.81
SIX4Q9UIU6 AC093591.3-201ENST00000634516 308 ntBASIC3.72□□□□□ -1.81
SIX4Q9UIU6 TEX21P-201ENST00000447107 1476 ntBASIC3.72□□□□□ -1.81
SIX4Q9UIU6 ZNF33CP-201ENST00000432492 2030 ntBASIC3.71□□□□□ -1.81
SIX4Q9UIU6 AC006378.2-201ENST00000623178 2476 ntBASIC3.71□□□□□ -1.81
SIX4Q9UIU6 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.81
SIX4Q9UIU6 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
SIX4Q9UIU6 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.81
SIX4Q9UIU6 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.71□□□□□ -1.81
SIX4Q9UIU6 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SIX4Q9UIU6 PRO1804-201ENST00000623780 2050 ntBASIC3.71□□□□□ -1.82
SIX4Q9UIU6 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
SIX4Q9UIU6 Y_RNA.3-201ENST00000362331 103 ntBASIC3.71□□□□□ -1.82
SIX4Q9UIU6 RNU5E-5P-201ENST00000365379 116 ntBASIC3.71□□□□□ -1.82
SIX4Q9UIU6 RPL31P1-201ENST00000398116 372 ntBASIC3.71□□□□□ -1.82
SIX4Q9UIU6 RN7SKP266-201ENST00000410232 287 ntBASIC3.71□□□□□ -1.82
SIX4Q9UIU6 AF274854.1-201ENST00000413236 615 ntBASIC3.71□□□□□ -1.82
SIX4Q9UIU6 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.71□□□□□ -1.82
SIX4Q9UIU6 OFD1P18Y-201ENST00000420889 959 ntBASIC3.71□□□□□ -1.82
SIX4Q9UIU6 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SIX4Q9UIU6 AP000907.1-201ENST00000428428 510 ntBASIC3.71□□□□□ -1.82
SIX4Q9UIU6 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.71□□□□□ -1.82
SIX4Q9UIU6 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.71□□□□□ -1.82
SIX4Q9UIU6 RPL37P21-201ENST00000435890 276 ntBASIC3.71□□□□□ -1.82
SIX4Q9UIU6 RSU1P2-202ENST00000437884 485 ntBASIC3.71□□□□□ -1.82
SIX4Q9UIU6 AL022238.1-201ENST00000442557 355 ntBASIC3.71□□□□□ -1.82
SIX4Q9UIU6 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.71□□□□□ -1.82
SIX4Q9UIU6 AC002381.1-201ENST00000447049 280 ntBASIC3.71□□□□□ -1.82
SIX4Q9UIU6 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.71□□□□□ -1.82
SIX4Q9UIU6 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.71□□□□□ -1.82
SIX4Q9UIU6 OR6K1P-201ENST00000456766 971 ntBASIC3.71□□□□□ -1.82
SIX4Q9UIU6 AC034236.1-201ENST00000469891 373 ntBASIC3.71□□□□□ -1.82
SIX4Q9UIU6 FAM172BP-201ENST00000487497 1089 ntBASIC3.71□□□□□ -1.82
SIX4Q9UIU6 AC106872.3-201ENST00000495104 446 ntBASIC3.71□□□□□ -1.82
SIX4Q9UIU6 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.71□□□□□ -1.82
SIX4Q9UIU6 Vault.1-201ENST00000516474 102 ntBASIC3.71□□□□□ -1.82
SIX4Q9UIU6 RNU6-405P-201ENST00000516637 110 ntBASIC3.71□□□□□ -1.82
SIX4Q9UIU6 DUXAP2-201ENST00000519198 589 ntBASIC3.71□□□□□ -1.82
SIX4Q9UIU6 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC3.71□□□□□ -1.82
SIX4Q9UIU6 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.71□□□□□ -1.82
SIX4Q9UIU6 COX6CP8-201ENST00000522620 226 ntBASIC3.71□□□□□ -1.82
SIX4Q9UIU6 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.71□□□□□ -1.82
SIX4Q9UIU6 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.71□□□□□ -1.82
SIX4Q9UIU6 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.71□□□□□ -1.82
SIX4Q9UIU6 AC092470.1-201ENST00000546187 132 ntBASIC3.71□□□□□ -1.82
SIX4Q9UIU6 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SIX4Q9UIU6 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.71□□□□□ -1.82
SIX4Q9UIU6 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.71□□□□□ -1.82
SIX4Q9UIU6 MIR5697-201ENST00000578045 78 ntBASIC3.71□□□□□ -1.82
SIX4Q9UIU6 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.71□□□□□ -1.82
SIX4Q9UIU6 MIR4307-201ENST00000582802 84 ntBASIC3.71□□□□□ -1.82
SIX4Q9UIU6 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.71□□□□□ -1.82
SIX4Q9UIU6 BBIP1P1-201ENST00000602999 279 ntBASIC3.71□□□□□ -1.82
SIX4Q9UIU6 SEPT7P9-203ENST00000604116 343 ntBASIC3.71□□□□□ -1.82
SIX4Q9UIU6 AL159169.3-201ENST00000608871 561 ntBASIC3.71□□□□□ -1.82
SIX4Q9UIU6 AC069200.1-201ENST00000609511 323 ntBASIC3.71□□□□□ -1.82
SIX4Q9UIU6 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.71□□□□□ -1.82
SIX4Q9UIU6 MIR7975-201ENST00000619350 68 ntBASIC3.71□□□□□ -1.82
SIX4Q9UIU6 CYP3A51P-201ENST00000633513 256 ntBASIC3.71□□□□□ -1.82
SIX4Q9UIU6 CRYM-AS1-204ENST00000637983 556 ntBASIC3.71□□□□□ -1.82
SIX4Q9UIU6 CEP170P1-201ENST00000502249 4587 ntBASIC3.71□□□□□ -1.82
SIX4Q9UIU6 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
SIX4Q9UIU6 AC027287.1-201ENST00000553115 1453 ntBASIC3.71□□□□□ -1.82
SIX4Q9UIU6 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.71□□□□□ -1.82
SIX4Q9UIU6 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.71□□□□□ -1.82
SIX4Q9UIU6 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.7□□□□□ -1.82
SIX4Q9UIU6 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SIX4Q9UIU6 MTCO1P12-201ENST00000414273 1543 ntBASIC3.7□□□□□ -1.82
SIX4Q9UIU6 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SIX4Q9UIU6 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SIX4Q9UIU6 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
SIX4Q9UIU6 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
SIX4Q9UIU6 Y_RNA.41-201ENST00000362646 102 ntBASIC3.7□□□□□ -1.82
SIX4Q9UIU6 RNU1-33P-201ENST00000364249 162 ntBASIC3.7□□□□□ -1.82
SIX4Q9UIU6 RNU6-769P-201ENST00000384407 104 ntBASIC3.7□□□□□ -1.82
SIX4Q9UIU6 RNU6-809P-201ENST00000384461 107 ntBASIC3.7□□□□□ -1.82
SIX4Q9UIU6 AL031679.1-201ENST00000400616 525 ntBASIC3.7□□□□□ -1.82
SIX4Q9UIU6 RN7SKP111-201ENST00000410349 271 ntBASIC3.7□□□□□ -1.82
SIX4Q9UIU6 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SIX4Q9UIU6 BX842559.1-201ENST00000419615 532 ntBASIC3.7□□□□□ -1.82
SIX4Q9UIU6 FNDC3CP-201ENST00000420795 1155 ntBASIC3.7□□□□□ -1.82
SIX4Q9UIU6 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.7□□□□□ -1.82
SIX4Q9UIU6 AL356583.2-201ENST00000426536 280 ntBASIC3.7□□□□□ -1.82
SIX4Q9UIU6 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.7□□□□□ -1.82
SIX4Q9UIU6 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.7□□□□□ -1.82
SIX4Q9UIU6 AC008065.1-201ENST00000428525 348 ntBASIC3.7□□□□□ -1.82
SIX4Q9UIU6 AC097713.2-201ENST00000430199 356 ntBASIC3.7□□□□□ -1.82
SIX4Q9UIU6 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.7□□□□□ -1.82
SIX4Q9UIU6 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.7□□□□□ -1.82
SIX4Q9UIU6 RPL23AP74-201ENST00000437246 471 ntBASIC3.7□□□□□ -1.82
SIX4Q9UIU6 PAXBP1P1-201ENST00000449315 447 ntBASIC3.7□□□□□ -1.82
SIX4Q9UIU6 RPL37P6-202ENST00000464216 403 ntBASIC3.7□□□□□ -1.82
SIX4Q9UIU6 RPS4XP10-201ENST00000465034 731 ntBASIC3.7□□□□□ -1.82
SIX4Q9UIU6 RPL21P103-201ENST00000479921 488 ntBASIC3.7□□□□□ -1.82
SIX4Q9UIU6 AC093663.1-201ENST00000497190 394 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms