Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 RNA5SP148-201ENST00000516527 94 ntBASIC1.81□□□□□ -2.12
COMMD3Q9UBI1 RPL7P20-201ENST00000520308 745 ntBASIC1.81□□□□□ -2.12
COMMD3Q9UBI1 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC1.81□□□□□ -2.12
COMMD3Q9UBI1 AC087272.1-201ENST00000523624 533 ntBASIC1.81□□□□□ -2.12
COMMD3Q9UBI1 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC1.81□□□□□ -2.12
COMMD3Q9UBI1 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC1.81□□□□□ -2.12
COMMD3Q9UBI1 OR1M4P-201ENST00000589199 287 ntBASIC1.81□□□□□ -2.12
COMMD3Q9UBI1 AL442067.2-201ENST00000614033 363 ntBASIC1.81□□□□□ -2.12
COMMD3Q9UBI1 MIR6817-201ENST00000615588 66 ntBASIC1.81□□□□□ -2.12
COMMD3Q9UBI1 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC1.81□□□□□ -2.12
COMMD3Q9UBI1 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.81□□□□□ -2.12
COMMD3Q9UBI1 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
COMMD3Q9UBI1 OR5J1P-201ENST00000313544 939 ntBASIC1.8□□□□□ -2.12
COMMD3Q9UBI1 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
COMMD3Q9UBI1 RNA5SP68-201ENST00000363885 119 ntBASIC1.8□□□□□ -2.12
COMMD3Q9UBI1 AL513475.1-201ENST00000406602 315 ntBASIC1.8□□□□□ -2.12
COMMD3Q9UBI1 TMEM167AP1-201ENST00000423409 219 ntBASIC1.8□□□□□ -2.12
COMMD3Q9UBI1 MRPS33P4-201ENST00000434892 317 ntBASIC1.8□□□□□ -2.12
COMMD3Q9UBI1 TRAPPC13P1-201ENST00000435991 1062 ntBASIC1.8□□□□□ -2.12
COMMD3Q9UBI1 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC1.8□□□□□ -2.12
COMMD3Q9UBI1 NAP1L1P3-201ENST00000462291 880 ntBASIC1.8□□□□□ -2.12
COMMD3Q9UBI1 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC1.8□□□□□ -2.12
COMMD3Q9UBI1 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.8□□□□□ -2.12
COMMD3Q9UBI1 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC1.8□□□□□ -2.12
COMMD3Q9UBI1 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC1.8□□□□□ -2.12
COMMD3Q9UBI1 GTF3AP2-201ENST00000557014 266 ntBASIC1.8□□□□□ -2.12
COMMD3Q9UBI1 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC1.8□□□□□ -2.12
COMMD3Q9UBI1 DPRXP5-201ENST00000604662 539 ntBASIC1.8□□□□□ -2.12
COMMD3Q9UBI1 AC012468.1-201ENST00000604888 430 ntBASIC1.8□□□□□ -2.12
COMMD3Q9UBI1 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC1.8□□□□□ -2.12
COMMD3Q9UBI1 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
COMMD3Q9UBI1 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
COMMD3Q9UBI1 MTND4P8-201ENST00000514997 1362 ntBASIC1.8□□□□□ -2.12
COMMD3Q9UBI1 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
COMMD3Q9UBI1 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC1.8□□□□□ -2.12
COMMD3Q9UBI1 RNU6-1249P-201ENST00000363237 111 ntBASIC1.79□□□□□ -2.12
COMMD3Q9UBI1 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC1.79□□□□□ -2.12
COMMD3Q9UBI1 RNU6-339P-201ENST00000384310 107 ntBASIC1.79□□□□□ -2.12
COMMD3Q9UBI1 DSTNP4-201ENST00000399472 474 ntBASIC1.79□□□□□ -2.12
COMMD3Q9UBI1 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.79□□□□□ -2.12
COMMD3Q9UBI1 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC1.79□□□□□ -2.12
COMMD3Q9UBI1 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.79□□□□□ -2.12
COMMD3Q9UBI1 AL451062.2-201ENST00000427515 271 ntBASIC1.79□□□□□ -2.12
COMMD3Q9UBI1 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.79□□□□□ -2.12
COMMD3Q9UBI1 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC1.79□□□□□ -2.12
COMMD3Q9UBI1 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.79□□□□□ -2.12
COMMD3Q9UBI1 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.79□□□□□ -2.12
COMMD3Q9UBI1 AL135752.1-201ENST00000479477 471 ntBASIC1.79□□□□□ -2.12
COMMD3Q9UBI1 PRELID3BP4-201ENST00000515476 571 ntBASIC1.79□□□□□ -2.12
COMMD3Q9UBI1 SCARNA16.3-201ENST00000516595 184 ntBASIC1.79□□□□□ -2.12
COMMD3Q9UBI1 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC1.79□□□□□ -2.12
COMMD3Q9UBI1 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC1.79□□□□□ -2.12
COMMD3Q9UBI1 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC1.79□□□□□ -2.12
COMMD3Q9UBI1 OR5AQ1P-201ENST00000527596 927 ntBASIC1.79□□□□□ -2.12
COMMD3Q9UBI1 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC1.79□□□□□ -2.12
COMMD3Q9UBI1 MIR4658-201ENST00000584344 65 ntBASIC1.79□□□□□ -2.12
COMMD3Q9UBI1 AL451007.1-201ENST00000595491 289 ntBASIC1.79□□□□□ -2.12
COMMD3Q9UBI1 NRBF2P5-201ENST00000603087 788 ntBASIC1.79□□□□□ -2.12
COMMD3Q9UBI1 AC106900.2-201ENST00000604994 317 ntBASIC1.79□□□□□ -2.12
COMMD3Q9UBI1 UBE2Q2P2-203ENST00000613592 761 ntBASIC1.79□□□□□ -2.12
COMMD3Q9UBI1 AL590099.1-201ENST00000615276 138 ntBASIC1.79□□□□□ -2.12
COMMD3Q9UBI1 AC012640.5-201ENST00000623897 319 ntBASIC1.79□□□□□ -2.12
COMMD3Q9UBI1 AC087359.1-201ENST00000508335 1740 ntBASIC1.79□□□□□ -2.12
COMMD3Q9UBI1 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
COMMD3Q9UBI1 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC1.79□□□□□ -2.12
COMMD3Q9UBI1 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC1.79□□□□□ -2.12
COMMD3Q9UBI1 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
COMMD3Q9UBI1 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC1.78□□□□□ -2.12
COMMD3Q9UBI1 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC1.78□□□□□ -2.12
COMMD3Q9UBI1 AC123912.3-201ENST00000600907 1367 ntBASIC1.78□□□□□ -2.12
COMMD3Q9UBI1 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
COMMD3Q9UBI1 RNU6-461P-201ENST00000364195 107 ntBASIC1.78□□□□□ -2.12
COMMD3Q9UBI1 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
COMMD3Q9UBI1 RNU6-193P-201ENST00000410977 107 ntBASIC1.78□□□□□ -2.12
COMMD3Q9UBI1 RNA5SP489-201ENST00000410986 109 ntBASIC1.78□□□□□ -2.12
COMMD3Q9UBI1 AL030996.1-201ENST00000411430 235 ntBASIC1.78□□□□□ -2.12
COMMD3Q9UBI1 UBE2Q2P12-201ENST00000414573 204 ntBASIC1.78□□□□□ -2.12
COMMD3Q9UBI1 AL512504.1-201ENST00000415494 778 ntBASIC1.78□□□□□ -2.12
COMMD3Q9UBI1 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.78□□□□□ -2.12
COMMD3Q9UBI1 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.78□□□□□ -2.12
COMMD3Q9UBI1 PTP4A1P7-201ENST00000423476 514 ntBASIC1.78□□□□□ -2.12
COMMD3Q9UBI1 AC027124.2-201ENST00000428249 105 ntBASIC1.78□□□□□ -2.12
COMMD3Q9UBI1 OR4K11P-201ENST00000431829 904 ntBASIC1.78□□□□□ -2.12
COMMD3Q9UBI1 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC1.78□□□□□ -2.12
COMMD3Q9UBI1 YWHAZP8-201ENST00000436935 731 ntBASIC1.78□□□□□ -2.12
COMMD3Q9UBI1 Z99127.2-201ENST00000441426 334 ntBASIC1.78□□□□□ -2.12
COMMD3Q9UBI1 GPM6BP3-201ENST00000442797 145 ntBASIC1.78□□□□□ -2.12
COMMD3Q9UBI1 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.78□□□□□ -2.12
COMMD3Q9UBI1 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.78□□□□□ -2.12
COMMD3Q9UBI1 AC233279.1-201ENST00000455300 423 ntBASIC1.78□□□□□ -2.12
COMMD3Q9UBI1 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC1.78□□□□□ -2.12
COMMD3Q9UBI1 AC078857.1-201ENST00000469870 667 ntBASIC1.78□□□□□ -2.12
COMMD3Q9UBI1 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC1.78□□□□□ -2.12
COMMD3Q9UBI1 AC096571.1-202ENST00000506634 735 ntBASIC1.78□□□□□ -2.12
COMMD3Q9UBI1 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.78□□□□□ -2.12
COMMD3Q9UBI1 RNA5SP281-201ENST00000516504 135 ntBASIC1.78□□□□□ -2.12
COMMD3Q9UBI1 SNORA70.24-201ENST00000517233 118 ntBASIC1.78□□□□□ -2.12
COMMD3Q9UBI1 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC1.78□□□□□ -2.12
COMMD3Q9UBI1 PTK2-220ENST00000520151 573 ntTSL 4 BASIC1.78□□□□□ -2.12
COMMD3Q9UBI1 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms