Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AC020593.1-201ENST00000507399 299 ntBASIC3.94□□□□□ -1.78
LRFN1Q9P244 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
LRFN1Q9P244 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.94□□□□□ -1.78
LRFN1Q9P244 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
LRFN1Q9P244 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.94□□□□□ -1.78
LRFN1Q9P244 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.94□□□□□ -1.78
LRFN1Q9P244 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.94□□□□□ -1.78
LRFN1Q9P244 AC123904.3-201ENST00000547218 814 ntBASIC3.94□□□□□ -1.78
LRFN1Q9P244 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.94□□□□□ -1.78
LRFN1Q9P244 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.94□□□□□ -1.78
LRFN1Q9P244 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.94□□□□□ -1.78
LRFN1Q9P244 AC099489.2-201ENST00000574976 260 ntBASIC3.94□□□□□ -1.78
LRFN1Q9P244 MIR4429-201ENST00000580105 73 ntBASIC3.94□□□□□ -1.78
LRFN1Q9P244 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.94□□□□□ -1.78
LRFN1Q9P244 AC079089.3-201ENST00000603094 673 ntBASIC3.94□□□□□ -1.78
LRFN1Q9P244 AC010201.1-201ENST00000605051 540 ntBASIC3.94□□□□□ -1.78
LRFN1Q9P244 AC013476.2-201ENST00000614456 459 ntBASIC3.94□□□□□ -1.78
LRFN1Q9P244 SNHG22-203ENST00000617833 660 ntBASIC3.94□□□□□ -1.78
LRFN1Q9P244 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.94□□□□□ -1.78
LRFN1Q9P244 RMST_9.1-201ENST00000619945 193 ntBASIC3.94□□□□□ -1.78
LRFN1Q9P244 AC034229.5-201ENST00000624258 185 ntBASIC3.94□□□□□ -1.78
LRFN1Q9P244 AL136313.1-201ENST00000624804 202 ntBASIC3.94□□□□□ -1.78
LRFN1Q9P244 MIR492-201ENST00000638676 116 ntBASIC3.94□□□□□ -1.78
LRFN1Q9P244 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
LRFN1Q9P244 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.94□□□□□ -1.78
LRFN1Q9P244 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
LRFN1Q9P244 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
LRFN1Q9P244 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
LRFN1Q9P244 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
LRFN1Q9P244 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.94□□□□□ -1.78
LRFN1Q9P244 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.94□□□□□ -1.78
LRFN1Q9P244 AC008725.1-201ENST00000605123 2263 ntBASIC3.93□□□□□ -1.78
LRFN1Q9P244 MTND4P5-201ENST00000435821 1374 ntBASIC3.93□□□□□ -1.78
LRFN1Q9P244 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
LRFN1Q9P244 RNU6-1284P-201ENST00000363701 100 ntBASIC3.93□□□□□ -1.78
LRFN1Q9P244 RNU4-75P-201ENST00000364621 146 ntBASIC3.93□□□□□ -1.78
LRFN1Q9P244 RNY4P34-201ENST00000364779 95 ntBASIC3.93□□□□□ -1.78
LRFN1Q9P244 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
LRFN1Q9P244 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.93□□□□□ -1.78
LRFN1Q9P244 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.93□□□□□ -1.78
LRFN1Q9P244 TXNP7-201ENST00000406296 293 ntBASIC3.93□□□□□ -1.78
LRFN1Q9P244 MIR1290-201ENST00000408735 78 ntBASIC3.93□□□□□ -1.78
LRFN1Q9P244 RNU6-628P-201ENST00000410675 107 ntBASIC3.93□□□□□ -1.78
LRFN1Q9P244 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.93□□□□□ -1.78
LRFN1Q9P244 MTCO3P41-201ENST00000414801 328 ntBASIC3.93□□□□□ -1.78
LRFN1Q9P244 C1DP2-201ENST00000418167 426 ntBASIC3.93□□□□□ -1.78
LRFN1Q9P244 RPS15AP12-201ENST00000419498 388 ntBASIC3.93□□□□□ -1.78
LRFN1Q9P244 PDSS1P1-201ENST00000422953 1114 ntBASIC3.93□□□□□ -1.78
LRFN1Q9P244 COX6B1P7-201ENST00000430845 235 ntBASIC3.93□□□□□ -1.78
LRFN1Q9P244 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.93□□□□□ -1.78
LRFN1Q9P244 BTF3P10-201ENST00000433415 495 ntBASIC3.93□□□□□ -1.78
LRFN1Q9P244 AC119618.1-201ENST00000434191 222 ntBASIC3.93□□□□□ -1.78
LRFN1Q9P244 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.93□□□□□ -1.78
LRFN1Q9P244 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.93□□□□□ -1.78
LRFN1Q9P244 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
LRFN1Q9P244 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.93□□□□□ -1.78
LRFN1Q9P244 AL662791.1-201ENST00000441992 928 ntBASIC3.93□□□□□ -1.78
LRFN1Q9P244 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.93□□□□□ -1.78
LRFN1Q9P244 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC3.93□□□□□ -1.78
LRFN1Q9P244 RPL23AP81-201ENST00000455252 467 ntBASIC3.93□□□□□ -1.78
LRFN1Q9P244 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
LRFN1Q9P244 AC068305.1-201ENST00000497406 726 ntBASIC3.93□□□□□ -1.78
LRFN1Q9P244 AC025445.1-201ENST00000502728 300 ntBASIC3.93□□□□□ -1.78
LRFN1Q9P244 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
LRFN1Q9P244 HMGB3P15-201ENST00000507326 574 ntBASIC3.93□□□□□ -1.78
LRFN1Q9P244 AL359273.1-201ENST00000510918 627 ntBASIC3.93□□□□□ -1.78
LRFN1Q9P244 RNU6-405P-201ENST00000516637 110 ntBASIC3.93□□□□□ -1.78
LRFN1Q9P244 RNA5SP337-201ENST00000517007 109 ntBASIC3.93□□□□□ -1.78
LRFN1Q9P244 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.93□□□□□ -1.78
LRFN1Q9P244 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.93□□□□□ -1.78
LRFN1Q9P244 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.93□□□□□ -1.78
LRFN1Q9P244 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.93□□□□□ -1.78
LRFN1Q9P244 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.93□□□□□ -1.78
LRFN1Q9P244 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.93□□□□□ -1.78
LRFN1Q9P244 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.93□□□□□ -1.78
LRFN1Q9P244 AGGF1P4-201ENST00000568249 801 ntBASIC3.93□□□□□ -1.78
LRFN1Q9P244 AL121834.1-201ENST00000572284 509 ntBASIC3.93□□□□□ -1.78
LRFN1Q9P244 AF038458.1-201ENST00000588406 262 ntBASIC3.93□□□□□ -1.78
LRFN1Q9P244 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.93□□□□□ -1.78
LRFN1Q9P244 RPL7P50-201ENST00000600588 727 ntBASIC3.93□□□□□ -1.78
LRFN1Q9P244 AL161729.3-201ENST00000603533 673 ntBASIC3.93□□□□□ -1.78
LRFN1Q9P244 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.93□□□□□ -1.78
LRFN1Q9P244 AC103710.2-201ENST00000609912 942 ntBASIC3.93□□□□□ -1.78
LRFN1Q9P244 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.93□□□□□ -1.78
LRFN1Q9P244 AL110115.1-201ENST00000614396 364 ntBASIC3.93□□□□□ -1.78
LRFN1Q9P244 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.93□□□□□ -1.78
LRFN1Q9P244 AC140113.4-201ENST00000622087 222 ntBASIC3.93□□□□□ -1.78
LRFN1Q9P244 AL445363.3-201ENST00000623080 671 ntBASIC3.93□□□□□ -1.78
LRFN1Q9P244 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
LRFN1Q9P244 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
LRFN1Q9P244 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
LRFN1Q9P244 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.93□□□□□ -1.78
LRFN1Q9P244 SUPT16HP1-201ENST00000537175 3133 ntBASIC3.93□□□□□ -1.78
LRFN1Q9P244 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
LRFN1Q9P244 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
LRFN1Q9P244 PRO1804-201ENST00000623780 2050 ntBASIC3.93□□□□□ -1.78
LRFN1Q9P244 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
LRFN1Q9P244 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
LRFN1Q9P244 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
LRFN1Q9P244 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms