Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.41□□□□□ -1.7
MKS1Q9NXB0 AC007621.1-201ENST00000604544 437 ntBASIC4.41□□□□□ -1.7
MKS1Q9NXB0 AL049634.3-201ENST00000604968 457 ntBASIC4.41□□□□□ -1.7
MKS1Q9NXB0 AL121992.2-201ENST00000606262 256 ntBASIC4.41□□□□□ -1.7
MKS1Q9NXB0 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.41□□□□□ -1.7
MKS1Q9NXB0 FRG1KP-201ENST00000623592 341 ntBASIC4.41□□□□□ -1.7
MKS1Q9NXB0 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.41□□□□□ -1.7
MKS1Q9NXB0 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.41□□□□□ -1.7
MKS1Q9NXB0 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
MKS1Q9NXB0 ZNF680P1-201ENST00000436625 1469 ntBASIC4.41□□□□□ -1.7
MKS1Q9NXB0 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
MKS1Q9NXB0 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
MKS1Q9NXB0 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.41□□□□□ -1.7
MKS1Q9NXB0 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
MKS1Q9NXB0 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
MKS1Q9NXB0 AC108467.2-201ENST00000617640 1597 ntBASIC4.4□□□□□ -1.7
MKS1Q9NXB0 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.4□□□□□ -1.7
MKS1Q9NXB0 AC004520.1-201ENST00000608362 1413 ntBASIC4.4□□□□□ -1.7
MKS1Q9NXB0 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
MKS1Q9NXB0 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
MKS1Q9NXB0 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.4□□□□□ -1.7
MKS1Q9NXB0 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
MKS1Q9NXB0 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.4□□□□□ -1.7
MKS1Q9NXB0 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
MKS1Q9NXB0 RNA5SP123-201ENST00000363244 119 ntBASIC4.4□□□□□ -1.71
MKS1Q9NXB0 Y_RNA.367-201ENST00000365544 101 ntBASIC4.4□□□□□ -1.71
MKS1Q9NXB0 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
MKS1Q9NXB0 JKAMPP1-201ENST00000413804 919 ntBASIC4.4□□□□□ -1.71
MKS1Q9NXB0 BX510359.3-201ENST00000422168 306 ntBASIC4.4□□□□□ -1.71
MKS1Q9NXB0 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.4□□□□□ -1.71
MKS1Q9NXB0 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.4□□□□□ -1.71
MKS1Q9NXB0 HMGB3P12-201ENST00000438745 556 ntBASIC4.4□□□□□ -1.71
MKS1Q9NXB0 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.4□□□□□ -1.71
MKS1Q9NXB0 RPL26P6-201ENST00000440913 438 ntBASIC4.4□□□□□ -1.71
MKS1Q9NXB0 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC4.4□□□□□ -1.71
MKS1Q9NXB0 RPL23AP43-201ENST00000446445 471 ntBASIC4.4□□□□□ -1.71
MKS1Q9NXB0 GAPDHP27-201ENST00000447427 1020 ntBASIC4.4□□□□□ -1.71
MKS1Q9NXB0 FDX1P2-201ENST00000450769 375 ntBASIC4.4□□□□□ -1.71
MKS1Q9NXB0 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.4□□□□□ -1.71
MKS1Q9NXB0 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC4.4□□□□□ -1.71
MKS1Q9NXB0 RNU6-420P-201ENST00000458780 107 ntBASIC4.4□□□□□ -1.71
MKS1Q9NXB0 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
MKS1Q9NXB0 RPL36AP51-201ENST00000487216 318 ntBASIC4.4□□□□□ -1.71
MKS1Q9NXB0 AP001086.1-201ENST00000494882 321 ntBASIC4.4□□□□□ -1.71
MKS1Q9NXB0 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC4.4□□□□□ -1.71
MKS1Q9NXB0 VN1R104P-201ENST00000505115 1009 ntBASIC4.4□□□□□ -1.71
MKS1Q9NXB0 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC4.4□□□□□ -1.71
MKS1Q9NXB0 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC4.4□□□□□ -1.71
MKS1Q9NXB0 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.4□□□□□ -1.71
MKS1Q9NXB0 AC023141.12-201ENST00000512399 199 ntBASIC4.4□□□□□ -1.71
MKS1Q9NXB0 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC4.4□□□□□ -1.71
MKS1Q9NXB0 RN7SKP276-201ENST00000516242 268 ntBASIC4.4□□□□□ -1.71
MKS1Q9NXB0 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC4.4□□□□□ -1.71
MKS1Q9NXB0 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.4□□□□□ -1.71
MKS1Q9NXB0 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC4.4□□□□□ -1.71
MKS1Q9NXB0 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.4□□□□□ -1.71
MKS1Q9NXB0 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.4□□□□□ -1.71
MKS1Q9NXB0 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
MKS1Q9NXB0 AP000907.4-201ENST00000604143 237 ntBASIC4.4□□□□□ -1.71
MKS1Q9NXB0 AC008536.2-201ENST00000607284 349 ntBASIC4.4□□□□□ -1.71
MKS1Q9NXB0 AC093788.1-201ENST00000609356 927 ntBASIC4.4□□□□□ -1.71
MKS1Q9NXB0 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.4□□□□□ -1.71
MKS1Q9NXB0 AL360181.4-201ENST00000621752 134 ntBASIC4.4□□□□□ -1.71
MKS1Q9NXB0 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC4.4□□□□□ -1.71
MKS1Q9NXB0 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.4□□□□□ -1.71
MKS1Q9NXB0 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
MKS1Q9NXB0 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
MKS1Q9NXB0 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.4□□□□□ -1.71
MKS1Q9NXB0 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
MKS1Q9NXB0 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
MKS1Q9NXB0 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.4□□□□□ -1.71
MKS1Q9NXB0 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
MKS1Q9NXB0 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
MKS1Q9NXB0 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
MKS1Q9NXB0 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
MKS1Q9NXB0 AC139713.2-214ENST00000642059 1811 ntBASIC4.39□□□□□ -1.71
MKS1Q9NXB0 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.39□□□□□ -1.71
MKS1Q9NXB0 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
MKS1Q9NXB0 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
MKS1Q9NXB0 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
MKS1Q9NXB0 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
MKS1Q9NXB0 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
MKS1Q9NXB0 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.39□□□□□ -1.71
MKS1Q9NXB0 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
MKS1Q9NXB0 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.39□□□□□ -1.71
MKS1Q9NXB0 RNA5SP191-201ENST00000362585 102 ntBASIC4.39□□□□□ -1.71
MKS1Q9NXB0 RNU6-173P-201ENST00000364215 104 ntBASIC4.39□□□□□ -1.71
MKS1Q9NXB0 SNORA7.2-201ENST00000364446 145 ntBASIC4.39□□□□□ -1.71
MKS1Q9NXB0 Y_RNA.381-201ENST00000365666 102 ntBASIC4.39□□□□□ -1.71
MKS1Q9NXB0 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC4.39□□□□□ -1.71
MKS1Q9NXB0 Y_RNA.573-201ENST00000384763 105 ntBASIC4.39□□□□□ -1.71
MKS1Q9NXB0 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
MKS1Q9NXB0 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC4.39□□□□□ -1.71
MKS1Q9NXB0 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.39□□□□□ -1.71
MKS1Q9NXB0 MRPL50P2-201ENST00000416821 482 ntBASIC4.39□□□□□ -1.71
MKS1Q9NXB0 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.39□□□□□ -1.71
MKS1Q9NXB0 MTND4LP11-201ENST00000422184 280 ntBASIC4.39□□□□□ -1.71
MKS1Q9NXB0 RBMY2QP-201ENST00000429799 1147 ntBASIC4.39□□□□□ -1.71
MKS1Q9NXB0 AC068287.1-201ENST00000430283 295 ntBASIC4.39□□□□□ -1.71
MKS1Q9NXB0 USP12PX-201ENST00000432383 1057 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms