Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
CUEDC1Q9NWM3 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CUEDC1Q9NWM3 RNU1-150P-201ENST00000362491 162 ntBASIC5.65□□□□□ -1.5
CUEDC1Q9NWM3 Y_RNA.170-201ENST00000363746 110 ntBASIC5.65□□□□□ -1.5
CUEDC1Q9NWM3 RNU6-715P-201ENST00000365204 103 ntBASIC5.65□□□□□ -1.5
CUEDC1Q9NWM3 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.65□□□□□ -1.5
CUEDC1Q9NWM3 RNU6-1117P-201ENST00000384525 104 ntBASIC5.65□□□□□ -1.5
CUEDC1Q9NWM3 MIR124-3-201ENST00000384866 87 ntBASIC5.65□□□□□ -1.5
CUEDC1Q9NWM3 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CUEDC1Q9NWM3 RNU2-20P-201ENST00000410425 191 ntBASIC5.65□□□□□ -1.5
CUEDC1Q9NWM3 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.65□□□□□ -1.5
CUEDC1Q9NWM3 AL353997.1-201ENST00000432936 108 ntBASIC5.65□□□□□ -1.5
CUEDC1Q9NWM3 Z95327.1-201ENST00000446082 482 ntBASIC5.65□□□□□ -1.5
CUEDC1Q9NWM3 RNU7-187P-201ENST00000458985 68 ntBASIC5.65□□□□□ -1.5
CUEDC1Q9NWM3 AL122020.1-201ENST00000472287 459 ntBASIC5.65□□□□□ -1.5
CUEDC1Q9NWM3 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.65□□□□□ -1.5
CUEDC1Q9NWM3 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC5.65□□□□□ -1.5
CUEDC1Q9NWM3 UBA52P7-201ENST00000486088 380 ntBASIC5.65□□□□□ -1.5
CUEDC1Q9NWM3 AP001086.1-201ENST00000494882 321 ntBASIC5.65□□□□□ -1.5
CUEDC1Q9NWM3 COX7A2P2-201ENST00000505291 250 ntBASIC5.65□□□□□ -1.5
CUEDC1Q9NWM3 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CUEDC1Q9NWM3 AC008716.1-201ENST00000511084 513 ntBASIC5.65□□□□□ -1.5
CUEDC1Q9NWM3 AC107393.1-201ENST00000512403 346 ntBASIC5.65□□□□□ -1.5
CUEDC1Q9NWM3 RNU6-27P-201ENST00000516146 107 ntBASIC5.65□□□□□ -1.5
CUEDC1Q9NWM3 IGKV2-38-201ENST00000517443 247 ntBASIC5.65□□□□□ -1.5
CUEDC1Q9NWM3 AC087441.2-201ENST00000529141 262 ntBASIC5.65□□□□□ -1.5
CUEDC1Q9NWM3 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.65□□□□□ -1.5
CUEDC1Q9NWM3 GSTP1P1-201ENST00000548078 319 ntBASIC5.65□□□□□ -1.5
CUEDC1Q9NWM3 AC022404.1-201ENST00000555320 273 ntBASIC5.65□□□□□ -1.5
CUEDC1Q9NWM3 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.65□□□□□ -1.5
CUEDC1Q9NWM3 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.65□□□□□ -1.5
CUEDC1Q9NWM3 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.65□□□□□ -1.5
CUEDC1Q9NWM3 AC073410.2-201ENST00000603240 332 ntBASIC5.65□□□□□ -1.5
CUEDC1Q9NWM3 AL139099.4-201ENST00000614802 114 ntBASIC5.65□□□□□ -1.5
CUEDC1Q9NWM3 AC131238.1-201ENST00000617135 328 ntBASIC5.65□□□□□ -1.5
CUEDC1Q9NWM3 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.65□□□□□ -1.5
CUEDC1Q9NWM3 AL450472.1-202ENST00000637286 180 ntBASIC5.65□□□□□ -1.5
CUEDC1Q9NWM3 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CUEDC1Q9NWM3 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.65□□□□□ -1.51
CUEDC1Q9NWM3 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CUEDC1Q9NWM3 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
CUEDC1Q9NWM3 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CUEDC1Q9NWM3 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CUEDC1Q9NWM3 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.65□□□□□ -1.51
CUEDC1Q9NWM3 AL137003.2-201ENST00000606924 2538 ntBASIC5.65□□□□□ -1.51
CUEDC1Q9NWM3 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.65□□□□□ -1.51
CUEDC1Q9NWM3 AC100757.1-201ENST00000616872 1835 ntBASIC5.64□□□□□ -1.51
CUEDC1Q9NWM3 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CUEDC1Q9NWM3 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.64□□□□□ -1.51
CUEDC1Q9NWM3 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CUEDC1Q9NWM3 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
CUEDC1Q9NWM3 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
CUEDC1Q9NWM3 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CUEDC1Q9NWM3 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.64□□□□□ -1.51
CUEDC1Q9NWM3 RNY1P16-201ENST00000363063 111 ntBASIC5.64□□□□□ -1.51
CUEDC1Q9NWM3 RNU6-1284P-201ENST00000363701 100 ntBASIC5.64□□□□□ -1.51
CUEDC1Q9NWM3 RNY3P11-201ENST00000364153 102 ntBASIC5.64□□□□□ -1.51
CUEDC1Q9NWM3 RNU6-1317P-201ENST00000364582 104 ntBASIC5.64□□□□□ -1.51
CUEDC1Q9NWM3 Y_RNA.277-201ENST00000364754 102 ntBASIC5.64□□□□□ -1.51
CUEDC1Q9NWM3 RNU6-821P-201ENST00000390995 107 ntBASIC5.64□□□□□ -1.51
CUEDC1Q9NWM3 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
CUEDC1Q9NWM3 MIR1203-201ENST00000408812 85 ntBASIC5.64□□□□□ -1.51
CUEDC1Q9NWM3 RNU2-51P-201ENST00000410708 197 ntBASIC5.64□□□□□ -1.51
CUEDC1Q9NWM3 RNU4-78P-201ENST00000410940 126 ntBASIC5.64□□□□□ -1.51
CUEDC1Q9NWM3 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.64□□□□□ -1.51
CUEDC1Q9NWM3 RPS12P23-201ENST00000419579 400 ntBASIC5.64□□□□□ -1.51
CUEDC1Q9NWM3 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CUEDC1Q9NWM3 AC023141.8-201ENST00000442554 208 ntBASIC5.64□□□□□ -1.51
CUEDC1Q9NWM3 MRPL48P1-201ENST00000445390 636 ntBASIC5.64□□□□□ -1.51
CUEDC1Q9NWM3 RPL36AP39-201ENST00000445859 318 ntBASIC5.64□□□□□ -1.51
CUEDC1Q9NWM3 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.64□□□□□ -1.51
CUEDC1Q9NWM3 AC004129.2-201ENST00000457229 287 ntBASIC5.64□□□□□ -1.51
CUEDC1Q9NWM3 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC5.64□□□□□ -1.51
CUEDC1Q9NWM3 RN7SL432P-201ENST00000484057 298 ntBASIC5.64□□□□□ -1.51
CUEDC1Q9NWM3 AC231760.1-201ENST00000498002 260 ntBASIC5.64□□□□□ -1.51
CUEDC1Q9NWM3 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC5.64□□□□□ -1.51
CUEDC1Q9NWM3 AC108043.1-201ENST00000512696 574 ntBASIC5.64□□□□□ -1.51
CUEDC1Q9NWM3 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.64□□□□□ -1.51
CUEDC1Q9NWM3 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.64□□□□□ -1.51
CUEDC1Q9NWM3 IGKV2-23-201ENST00000518729 323 ntBASIC5.64□□□□□ -1.51
CUEDC1Q9NWM3 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.64□□□□□ -1.51
CUEDC1Q9NWM3 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC5.64□□□□□ -1.51
CUEDC1Q9NWM3 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.64□□□□□ -1.51
CUEDC1Q9NWM3 AL670379.6-201ENST00000603753 252 ntBASIC5.64□□□□□ -1.51
CUEDC1Q9NWM3 AL670379.1-201ENST00000604752 252 ntBASIC5.64□□□□□ -1.51
CUEDC1Q9NWM3 AL670379.5-201ENST00000605253 252 ntBASIC5.64□□□□□ -1.51
CUEDC1Q9NWM3 AL670379.8-201ENST00000605353 252 ntBASIC5.64□□□□□ -1.51
CUEDC1Q9NWM3 AL670379.7-201ENST00000605823 252 ntBASIC5.64□□□□□ -1.51
CUEDC1Q9NWM3 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC5.64□□□□□ -1.51
CUEDC1Q9NWM3 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
CUEDC1Q9NWM3 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.64□□□□□ -1.51
CUEDC1Q9NWM3 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CUEDC1Q9NWM3 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.64□□□□□ -1.51
CUEDC1Q9NWM3 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.64□□□□□ -1.51
CUEDC1Q9NWM3 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
CUEDC1Q9NWM3 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.64□□□□□ -1.51
CUEDC1Q9NWM3 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CUEDC1Q9NWM3 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CUEDC1Q9NWM3 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
CUEDC1Q9NWM3 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms