Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.62□□□□□ -1.99
TREX1Q9NSU2 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
TREX1Q9NSU2 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC2.62□□□□□ -1.99
TREX1Q9NSU2 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.62□□□□□ -1.99
TREX1Q9NSU2 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.62□□□□□ -1.99
TREX1Q9NSU2 RPPH1-2P-201ENST00000516688 293 ntBASIC2.62□□□□□ -1.99
TREX1Q9NSU2 RNA5SP135-201ENST00000517019 125 ntBASIC2.62□□□□□ -1.99
TREX1Q9NSU2 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.62□□□□□ -1.99
TREX1Q9NSU2 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC2.62□□□□□ -1.99
TREX1Q9NSU2 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.62□□□□□ -1.99
TREX1Q9NSU2 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.62□□□□□ -1.99
TREX1Q9NSU2 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.62□□□□□ -1.99
TREX1Q9NSU2 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.62□□□□□ -1.99
TREX1Q9NSU2 AC093510.2-201ENST00000562820 896 ntBASIC2.62□□□□□ -1.99
TREX1Q9NSU2 FAM60BP-201ENST00000578364 658 ntBASIC2.62□□□□□ -1.99
TREX1Q9NSU2 AC055876.5-201ENST00000605667 259 ntBASIC2.62□□□□□ -1.99
TREX1Q9NSU2 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.62□□□□□ -1.99
TREX1Q9NSU2 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.62□□□□□ -1.99
TREX1Q9NSU2 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2.62□□□□□ -1.99
TREX1Q9NSU2 AP005229.2-201ENST00000609980 697 ntBASIC2.62□□□□□ -1.99
TREX1Q9NSU2 AC140725.3-201ENST00000616193 880 ntBASIC2.62□□□□□ -1.99
TREX1Q9NSU2 AC103798.2-201ENST00000624292 632 ntBASIC2.62□□□□□ -1.99
TREX1Q9NSU2 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.62□□□□□ -1.99
TREX1Q9NSU2 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
TREX1Q9NSU2 FAM35BP-202ENST00000497389 3337 ntBASIC2.62□□□□□ -1.99
TREX1Q9NSU2 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.62□□□□□ -1.99
TREX1Q9NSU2 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.62□□□□□ -1.99
TREX1Q9NSU2 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.62□□□□□ -1.99
TREX1Q9NSU2 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.61□□□□□ -1.99
TREX1Q9NSU2 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
TREX1Q9NSU2 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
TREX1Q9NSU2 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
TREX1Q9NSU2 RNA5SP210-201ENST00000391034 120 ntBASIC2.61□□□□□ -1.99
TREX1Q9NSU2 AL133264.1-201ENST00000407157 562 ntBASIC2.61□□□□□ -1.99
TREX1Q9NSU2 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
TREX1Q9NSU2 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.61□□□□□ -1.99
TREX1Q9NSU2 RPL39P40-201ENST00000445481 146 ntBASIC2.61□□□□□ -1.99
TREX1Q9NSU2 MTND2P19-201ENST00000449129 1012 ntBASIC2.61□□□□□ -1.99
TREX1Q9NSU2 MTCO2P9-201ENST00000503214 694 ntBASIC2.61□□□□□ -1.99
TREX1Q9NSU2 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.61□□□□□ -1.99
TREX1Q9NSU2 AC006390.1-201ENST00000508068 283 ntBASIC2.61□□□□□ -1.99
TREX1Q9NSU2 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.61□□□□□ -1.99
TREX1Q9NSU2 RNU6-27P-201ENST00000516146 107 ntBASIC2.61□□□□□ -1.99
TREX1Q9NSU2 SNORA31.21-201ENST00000517180 77 ntBASIC2.61□□□□□ -1.99
TREX1Q9NSU2 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC2.61□□□□□ -1.99
TREX1Q9NSU2 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.61□□□□□ -1.99
TREX1Q9NSU2 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.61□□□□□ -1.99
TREX1Q9NSU2 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.61□□□□□ -1.99
TREX1Q9NSU2 ELOCP29-201ENST00000588193 334 ntBASIC2.61□□□□□ -1.99
TREX1Q9NSU2 ATP1B3P1-201ENST00000605365 821 ntBASIC2.61□□□□□ -1.99
TREX1Q9NSU2 ZNF663P-202ENST00000641770 1131 ntBASIC2.61□□□□□ -1.99
TREX1Q9NSU2 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
TREX1Q9NSU2 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.61□□□□□ -1.99
TREX1Q9NSU2 AL049780.3-201ENST00000624612 1583 ntBASIC2.61□□□□□ -1.99
TREX1Q9NSU2 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
TREX1Q9NSU2 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.6□□□□□ -1.99
TREX1Q9NSU2 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.6□□□□□ -1.99
TREX1Q9NSU2 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
TREX1Q9NSU2 OR5J1P-201ENST00000313544 939 ntBASIC2.6□□□□□ -1.99
TREX1Q9NSU2 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
TREX1Q9NSU2 RNU6-251P-201ENST00000363235 104 ntBASIC2.6□□□□□ -1.99
TREX1Q9NSU2 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
TREX1Q9NSU2 RNU6-354P-201ENST00000383862 107 ntBASIC2.6□□□□□ -1.99
TREX1Q9NSU2 SNORA51.6-201ENST00000384151 125 ntBASIC2.6□□□□□ -1.99
TREX1Q9NSU2 RNU6-610P-201ENST00000384264 107 ntBASIC2.6□□□□□ -1.99
TREX1Q9NSU2 RNU6-549P-201ENST00000384433 107 ntBASIC2.6□□□□□ -1.99
TREX1Q9NSU2 MTND4P13-201ENST00000402078 1023 ntBASIC2.6□□□□□ -1.99
TREX1Q9NSU2 CYCSP45-201ENST00000402289 315 ntBASIC2.6□□□□□ -1.99
TREX1Q9NSU2 AL024474.1-201ENST00000404655 591 ntBASIC2.6□□□□□ -1.99
TREX1Q9NSU2 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.6□□□□□ -1.99
TREX1Q9NSU2 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
TREX1Q9NSU2 RNU6-575P-201ENST00000411326 105 ntBASIC2.6□□□□□ -1.99
TREX1Q9NSU2 RPLP0P7-201ENST00000416050 667 ntBASIC2.6□□□□□ -1.99
TREX1Q9NSU2 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.6□□□□□ -1.99
TREX1Q9NSU2 USP9YP20-201ENST00000419224 558 ntBASIC2.6□□□□□ -1.99
TREX1Q9NSU2 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.6□□□□□ -1.99
TREX1Q9NSU2 RPL7P44-201ENST00000424827 742 ntBASIC2.6□□□□□ -1.99
TREX1Q9NSU2 UBE2D3P3-201ENST00000426992 425 ntBASIC2.6□□□□□ -1.99
TREX1Q9NSU2 MTND4LP10-201ENST00000435146 291 ntBASIC2.6□□□□□ -1.99
TREX1Q9NSU2 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.6□□□□□ -1.99
TREX1Q9NSU2 AC092798.1-201ENST00000458542 409 ntBASIC2.6□□□□□ -1.99
TREX1Q9NSU2 RPS27AP9-201ENST00000477681 438 ntBASIC2.6□□□□□ -1.99
TREX1Q9NSU2 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.6□□□□□ -1.99
TREX1Q9NSU2 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
TREX1Q9NSU2 AC097462.2-201ENST00000504623 481 ntBASIC2.6□□□□□ -1.99
TREX1Q9NSU2 AC091860.1-201ENST00000505723 432 ntBASIC2.6□□□□□ -1.99
TREX1Q9NSU2 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.6□□□□□ -1.99
TREX1Q9NSU2 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
TREX1Q9NSU2 AC034159.1-201ENST00000513885 583 ntBASIC2.6□□□□□ -1.99
TREX1Q9NSU2 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.6□□□□□ -1.99
TREX1Q9NSU2 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.6□□□□□ -1.99
TREX1Q9NSU2 AP003102.1-201ENST00000525638 661 ntBASIC2.6□□□□□ -1.99
TREX1Q9NSU2 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.6□□□□□ -1.99
TREX1Q9NSU2 AC243972.3-201ENST00000539655 198 ntBASIC2.6□□□□□ -1.99
TREX1Q9NSU2 EEF1B2P4-201ENST00000551398 348 ntBASIC2.6□□□□□ -1.99
TREX1Q9NSU2 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
TREX1Q9NSU2 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.6□□□□□ -1.99
TREX1Q9NSU2 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC2.6□□□□□ -1.99
TREX1Q9NSU2 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.6□□□□□ -1.99
TREX1Q9NSU2 AP001542.2-201ENST00000593141 364 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms