Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CISHQ9NSE2 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
CISHQ9NSE2 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.3□□□□□ -2.04
CISHQ9NSE2 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CISHQ9NSE2 AC016716.1-201ENST00000265882 708 ntBASIC2.3□□□□□ -2.04
CISHQ9NSE2 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CISHQ9NSE2 RNU6-1180P-201ENST00000364935 107 ntBASIC2.3□□□□□ -2.04
CISHQ9NSE2 SNORA48.3-201ENST00000391081 134 ntBASIC2.3□□□□□ -2.04
CISHQ9NSE2 RPS4XP3-201ENST00000398541 413 ntBASIC2.3□□□□□ -2.04
CISHQ9NSE2 SSXP10-201ENST00000402595 565 ntBASIC2.3□□□□□ -2.04
CISHQ9NSE2 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CISHQ9NSE2 AC092638.1-201ENST00000411966 1275 ntBASIC2.3□□□□□ -2.04
CISHQ9NSE2 AC005005.2-201ENST00000420779 380 ntBASIC2.3□□□□□ -2.04
CISHQ9NSE2 LSM1P1-201ENST00000438629 273 ntBASIC2.3□□□□□ -2.04
CISHQ9NSE2 AL645638.1-201ENST00000440519 361 ntBASIC2.3□□□□□ -2.04
CISHQ9NSE2 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC2.3□□□□□ -2.04
CISHQ9NSE2 AC068135.1-201ENST00000446164 246 ntBASIC2.3□□□□□ -2.04
CISHQ9NSE2 ZNF736P6Y-201ENST00000447526 1213 ntBASIC2.3□□□□□ -2.04
CISHQ9NSE2 AL118520.1-201ENST00000450770 291 ntBASIC2.3□□□□□ -2.04
CISHQ9NSE2 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.3□□□□□ -2.04
CISHQ9NSE2 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.3□□□□□ -2.04
CISHQ9NSE2 RAC1P5-201ENST00000512182 576 ntBASIC2.3□□□□□ -2.04
CISHQ9NSE2 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC2.3□□□□□ -2.04
CISHQ9NSE2 HAUS1P3-201ENST00000523909 662 ntBASIC2.3□□□□□ -2.04
CISHQ9NSE2 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.3□□□□□ -2.04
CISHQ9NSE2 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.3□□□□□ -2.04
CISHQ9NSE2 AC091544.4-201ENST00000555268 342 ntBASIC2.3□□□□□ -2.04
CISHQ9NSE2 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.3□□□□□ -2.04
CISHQ9NSE2 AC009163.5-201ENST00000575421 637 ntBASIC2.3□□□□□ -2.04
CISHQ9NSE2 MIR1273D-201ENST00000577266 86 ntBASIC2.3□□□□□ -2.04
CISHQ9NSE2 DPRXP5-201ENST00000604662 539 ntBASIC2.3□□□□□ -2.04
CISHQ9NSE2 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC2.3□□□□□ -2.04
CISHQ9NSE2 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC2.3□□□□□ -2.04
CISHQ9NSE2 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.3□□□□□ -2.04
CISHQ9NSE2 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.3□□□□□ -2.04
CISHQ9NSE2 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.3□□□□□ -2.04
CISHQ9NSE2 ZNF720P1-201ENST00000562403 1939 ntBASIC2.3□□□□□ -2.04
CISHQ9NSE2 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
CISHQ9NSE2 ZNF658B-202ENST00000615961 3375 ntBASIC2.29□□□□□ -2.04
CISHQ9NSE2 AC005336.3-201ENST00000623833 2679 ntBASIC2.29□□□□□ -2.04
CISHQ9NSE2 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.29□□□□□ -2.04
CISHQ9NSE2 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CISHQ9NSE2 RNA5SP139-201ENST00000364340 117 ntBASIC2.29□□□□□ -2.04
CISHQ9NSE2 RNU6-339P-201ENST00000384310 107 ntBASIC2.29□□□□□ -2.04
CISHQ9NSE2 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.29□□□□□ -2.04
CISHQ9NSE2 SNORA11.4-201ENST00000408823 129 ntBASIC2.29□□□□□ -2.04
CISHQ9NSE2 RNA5SP425-201ENST00000410336 112 ntBASIC2.29□□□□□ -2.04
CISHQ9NSE2 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC2.29□□□□□ -2.04
CISHQ9NSE2 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.29□□□□□ -2.04
CISHQ9NSE2 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.29□□□□□ -2.04
CISHQ9NSE2 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC2.29□□□□□ -2.04
CISHQ9NSE2 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.29□□□□□ -2.04
CISHQ9NSE2 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC2.29□□□□□ -2.04
CISHQ9NSE2 AC104057.1-201ENST00000515547 497 ntBASIC2.29□□□□□ -2.04
CISHQ9NSE2 SNORA31.8-201ENST00000516327 108 ntBASIC2.29□□□□□ -2.04
CISHQ9NSE2 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CISHQ9NSE2 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2.29□□□□□ -2.04
CISHQ9NSE2 AP000889.1-201ENST00000530968 660 ntBASIC2.29□□□□□ -2.04
CISHQ9NSE2 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.29□□□□□ -2.04
CISHQ9NSE2 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.29□□□□□ -2.04
CISHQ9NSE2 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.29□□□□□ -2.04
CISHQ9NSE2 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.29□□□□□ -2.04
CISHQ9NSE2 EIF5A2P1-201ENST00000564027 460 ntBASIC2.29□□□□□ -2.04
CISHQ9NSE2 AC090666.1-201ENST00000578241 445 ntBASIC2.29□□□□□ -2.04
CISHQ9NSE2 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.29□□□□□ -2.04
CISHQ9NSE2 AC008687.2-201ENST00000597865 520 ntBASIC2.29□□□□□ -2.04
CISHQ9NSE2 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC2.29□□□□□ -2.04
CISHQ9NSE2 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.29□□□□□ -2.04
CISHQ9NSE2 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.28□□□□□ -2.04
CISHQ9NSE2 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.28□□□□□ -2.04
CISHQ9NSE2 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
CISHQ9NSE2 RSL24D1P4-201ENST00000400938 484 ntBASIC2.28□□□□□ -2.04
CISHQ9NSE2 RN7SKP223-201ENST00000410582 62 ntBASIC2.28□□□□□ -2.04
CISHQ9NSE2 AL513477.1-202ENST00000417061 214 ntBASIC2.28□□□□□ -2.04
CISHQ9NSE2 FNDC3CP-201ENST00000420795 1155 ntBASIC2.28□□□□□ -2.04
CISHQ9NSE2 AC129850.1-201ENST00000436203 508 ntBASIC2.28□□□□□ -2.04
CISHQ9NSE2 AC004865.1-201ENST00000442276 1003 ntBASIC2.28□□□□□ -2.04
CISHQ9NSE2 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.28□□□□□ -2.04
CISHQ9NSE2 SETP11-201ENST00000473027 690 ntBASIC2.28□□□□□ -2.04
CISHQ9NSE2 GZMAP1-201ENST00000503054 631 ntBASIC2.28□□□□□ -2.04
CISHQ9NSE2 MTND3P24-201ENST00000506306 329 ntBASIC2.28□□□□□ -2.04
CISHQ9NSE2 AC104090.1-201ENST00000506341 1171 ntBASIC2.28□□□□□ -2.04
CISHQ9NSE2 MTCO3P44-201ENST00000510977 541 ntBASIC2.28□□□□□ -2.04
CISHQ9NSE2 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.28□□□□□ -2.04
CISHQ9NSE2 RNU6-488P-201ENST00000515918 99 ntBASIC2.28□□□□□ -2.04
CISHQ9NSE2 AC026241.1-201ENST00000517873 2142 ntBASIC2.28□□□□□ -2.04
CISHQ9NSE2 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC2.28□□□□□ -2.04
CISHQ9NSE2 AC092470.1-201ENST00000546187 132 ntBASIC2.28□□□□□ -2.04
CISHQ9NSE2 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC2.28□□□□□ -2.04
CISHQ9NSE2 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.28□□□□□ -2.04
CISHQ9NSE2 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.28□□□□□ -2.04
CISHQ9NSE2 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.28□□□□□ -2.04
CISHQ9NSE2 MIR5002-201ENST00000584713 97 ntBASIC2.28□□□□□ -2.04
CISHQ9NSE2 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.28□□□□□ -2.04
CISHQ9NSE2 U73023.1-201ENST00000603134 700 ntBASIC2.28□□□□□ -2.04
CISHQ9NSE2 AL355812.1-201ENST00000603215 216 ntBASIC2.28□□□□□ -2.04
CISHQ9NSE2 AC128687.1-201ENST00000605304 619 ntBASIC2.28□□□□□ -2.04
CISHQ9NSE2 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.28□□□□□ -2.04
CISHQ9NSE2 AL161734.1-201ENST00000609720 557 ntBASIC2.28□□□□□ -2.04
CISHQ9NSE2 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms