Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HINT3Q9NQE9 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HINT3Q9NQE9 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
HINT3Q9NQE9 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HINT3Q9NQE9 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HINT3Q9NQE9 XIAPP3-201ENST00000312918 795 ntBASIC3.52□□□□□ -1.85
HINT3Q9NQE9 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HINT3Q9NQE9 RNA5SP130-201ENST00000364431 114 ntBASIC3.52□□□□□ -1.85
HINT3Q9NQE9 SNORA7.2-201ENST00000364446 145 ntBASIC3.52□□□□□ -1.85
HINT3Q9NQE9 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
HINT3Q9NQE9 Y_RNA.517-201ENST00000384551 106 ntBASIC3.52□□□□□ -1.85
HINT3Q9NQE9 RNU6-882P-201ENST00000391025 103 ntBASIC3.52□□□□□ -1.85
HINT3Q9NQE9 RNU2-43P-201ENST00000410306 190 ntBASIC3.52□□□□□ -1.85
HINT3Q9NQE9 RNU2-66P-201ENST00000410650 161 ntBASIC3.52□□□□□ -1.85
HINT3Q9NQE9 RNU6-628P-201ENST00000410675 107 ntBASIC3.52□□□□□ -1.85
HINT3Q9NQE9 RN7SKP263-201ENST00000411194 309 ntBASIC3.52□□□□□ -1.85
HINT3Q9NQE9 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.52□□□□□ -1.85
HINT3Q9NQE9 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.52□□□□□ -1.85
HINT3Q9NQE9 C1DP2-201ENST00000418167 426 ntBASIC3.52□□□□□ -1.85
HINT3Q9NQE9 CYP4F29P-201ENST00000420685 446 ntBASIC3.52□□□□□ -1.85
HINT3Q9NQE9 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.52□□□□□ -1.85
HINT3Q9NQE9 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.52□□□□□ -1.85
HINT3Q9NQE9 AC009961.2-201ENST00000435771 251 ntBASIC3.52□□□□□ -1.85
HINT3Q9NQE9 AC073614.1-201ENST00000438690 650 ntBASIC3.52□□□□□ -1.85
HINT3Q9NQE9 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.52□□□□□ -1.85
HINT3Q9NQE9 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.52□□□□□ -1.85
HINT3Q9NQE9 AL359073.1-201ENST00000448036 403 ntBASIC3.52□□□□□ -1.85
HINT3Q9NQE9 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.52□□□□□ -1.85
HINT3Q9NQE9 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.52□□□□□ -1.85
HINT3Q9NQE9 RPS3AP50-201ENST00000487064 803 ntBASIC3.52□□□□□ -1.85
HINT3Q9NQE9 AC106872.2-201ENST00000494303 480 ntBASIC3.52□□□□□ -1.85
HINT3Q9NQE9 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.52□□□□□ -1.85
HINT3Q9NQE9 CDC42P4-201ENST00000510507 563 ntBASIC3.52□□□□□ -1.85
HINT3Q9NQE9 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.52□□□□□ -1.85
HINT3Q9NQE9 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.52□□□□□ -1.85
HINT3Q9NQE9 RN7SKP21-201ENST00000516503 220 ntBASIC3.52□□□□□ -1.85
HINT3Q9NQE9 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.52□□□□□ -1.85
HINT3Q9NQE9 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.52□□□□□ -1.85
HINT3Q9NQE9 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.52□□□□□ -1.85
HINT3Q9NQE9 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.52□□□□□ -1.85
HINT3Q9NQE9 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.52□□□□□ -1.85
HINT3Q9NQE9 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.52□□□□□ -1.85
HINT3Q9NQE9 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.52□□□□□ -1.85
HINT3Q9NQE9 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.52□□□□□ -1.85
HINT3Q9NQE9 BNIP3P5-201ENST00000562290 498 ntBASIC3.52□□□□□ -1.85
HINT3Q9NQE9 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.52□□□□□ -1.85
HINT3Q9NQE9 MIR3146-201ENST00000580367 79 ntBASIC3.52□□□□□ -1.85
HINT3Q9NQE9 COX6CP3-201ENST00000580869 223 ntBASIC3.52□□□□□ -1.85
HINT3Q9NQE9 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.52□□□□□ -1.85
HINT3Q9NQE9 AL022099.1-201ENST00000604551 712 ntBASIC3.52□□□□□ -1.85
HINT3Q9NQE9 AC004908.2-201ENST00000609090 574 ntBASIC3.52□□□□□ -1.85
HINT3Q9NQE9 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.52□□□□□ -1.85
HINT3Q9NQE9 AC103710.1-201ENST00000610003 901 ntBASIC3.52□□□□□ -1.85
HINT3Q9NQE9 AC015540.1-201ENST00000615828 501 ntBASIC3.52□□□□□ -1.85
HINT3Q9NQE9 MIR6130-201ENST00000619419 109 ntBASIC3.52□□□□□ -1.85
HINT3Q9NQE9 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.52□□□□□ -1.85
HINT3Q9NQE9 AC099842.1-201ENST00000619919 596 ntBASIC3.52□□□□□ -1.85
HINT3Q9NQE9 PISRT1-201ENST00000626175 531 ntBASIC3.52□□□□□ -1.85
HINT3Q9NQE9 AC110994.2-201ENST00000635481 492 ntBASIC3.52□□□□□ -1.85
HINT3Q9NQE9 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HINT3Q9NQE9 FARSBP1-201ENST00000435808 1778 ntBASIC3.52□□□□□ -1.85
HINT3Q9NQE9 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HINT3Q9NQE9 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
HINT3Q9NQE9 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
HINT3Q9NQE9 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HINT3Q9NQE9 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
HINT3Q9NQE9 RNU5A-8P-201ENST00000364102 114 ntBASIC3.51□□□□□ -1.85
HINT3Q9NQE9 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.51□□□□□ -1.85
HINT3Q9NQE9 RNU6-1181P-201ENST00000384191 106 ntBASIC3.51□□□□□ -1.85
HINT3Q9NQE9 RNU6-1042P-201ENST00000384204 107 ntBASIC3.51□□□□□ -1.85
HINT3Q9NQE9 MRPL42P2-201ENST00000403169 426 ntBASIC3.51□□□□□ -1.85
HINT3Q9NQE9 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.51□□□□□ -1.85
HINT3Q9NQE9 AL356095.1-201ENST00000417217 199 ntBASIC3.51□□□□□ -1.85
HINT3Q9NQE9 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.51□□□□□ -1.85
HINT3Q9NQE9 ZNF885P-201ENST00000420174 1098 ntBASIC3.51□□□□□ -1.85
HINT3Q9NQE9 RPL21P109-201ENST00000422213 475 ntBASIC3.51□□□□□ -1.85
HINT3Q9NQE9 AC010975.2-201ENST00000427781 588 ntBASIC3.51□□□□□ -1.85
HINT3Q9NQE9 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC3.51□□□□□ -1.85
HINT3Q9NQE9 RPL35AP22-201ENST00000436855 335 ntBASIC3.51□□□□□ -1.85
HINT3Q9NQE9 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
HINT3Q9NQE9 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.51□□□□□ -1.85
HINT3Q9NQE9 RABEPKP1-201ENST00000440529 1026 ntBASIC3.51□□□□□ -1.85
HINT3Q9NQE9 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.51□□□□□ -1.85
HINT3Q9NQE9 AL121871.1-201ENST00000443413 436 ntBASIC3.51□□□□□ -1.85
HINT3Q9NQE9 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.51□□□□□ -1.85
HINT3Q9NQE9 TMED11P-201ENST00000479478 690 ntBASIC3.51□□□□□ -1.85
HINT3Q9NQE9 AC110792.1-201ENST00000491826 472 ntBASIC3.51□□□□□ -1.85
HINT3Q9NQE9 AL132838.2-201ENST00000492041 314 ntBASIC3.51□□□□□ -1.85
HINT3Q9NQE9 AC135721.1-201ENST00000497954 479 ntBASIC3.51□□□□□ -1.85
HINT3Q9NQE9 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.51□□□□□ -1.85
HINT3Q9NQE9 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.51□□□□□ -1.85
HINT3Q9NQE9 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.51□□□□□ -1.85
HINT3Q9NQE9 AC026801.2-201ENST00000515352 425 ntBASIC3.51□□□□□ -1.85
HINT3Q9NQE9 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.51□□□□□ -1.85
HINT3Q9NQE9 AC087369.1-201ENST00000520775 996 ntBASIC3.51□□□□□ -1.85
HINT3Q9NQE9 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.51□□□□□ -1.85
HINT3Q9NQE9 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.51□□□□□ -1.85
HINT3Q9NQE9 AC109635.4-202ENST00000531666 412 ntBASIC3.51□□□□□ -1.85
HINT3Q9NQE9 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HINT3Q9NQE9 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms