Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 RNU6-637P-201ENST00000384050 107 ntBASIC4.67□□□□□ -1.66
VTA1Q9NP79 RNU2-47P-201ENST00000410649 186 ntBASIC4.67□□□□□ -1.66
VTA1Q9NP79 HSPE1P12-201ENST00000412576 301 ntBASIC4.67□□□□□ -1.66
VTA1Q9NP79 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.67□□□□□ -1.66
VTA1Q9NP79 RPS7P15-201ENST00000415804 584 ntBASIC4.67□□□□□ -1.66
VTA1Q9NP79 RPS15AP12-201ENST00000419498 388 ntBASIC4.67□□□□□ -1.66
VTA1Q9NP79 AC069157.1-201ENST00000421749 137 ntBASIC4.67□□□□□ -1.66
VTA1Q9NP79 AL139415.2-201ENST00000431968 163 ntBASIC4.67□□□□□ -1.66
VTA1Q9NP79 AC007389.2-201ENST00000434630 306 ntBASIC4.67□□□□□ -1.66
VTA1Q9NP79 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.67□□□□□ -1.66
VTA1Q9NP79 FTH1P1-201ENST00000437933 532 ntBASIC4.67□□□□□ -1.66
VTA1Q9NP79 MTCO3P18-201ENST00000440206 761 ntBASIC4.67□□□□□ -1.66
VTA1Q9NP79 AC006011.1-201ENST00000442758 349 ntBASIC4.67□□□□□ -1.66
VTA1Q9NP79 AC110792.1-201ENST00000491826 472 ntBASIC4.67□□□□□ -1.66
VTA1Q9NP79 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.67□□□□□ -1.66
VTA1Q9NP79 PRDX4P1-201ENST00000507189 574 ntBASIC4.67□□□□□ -1.66
VTA1Q9NP79 STMN1P2-201ENST00000508435 439 ntBASIC4.67□□□□□ -1.66
VTA1Q9NP79 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC4.67□□□□□ -1.66
VTA1Q9NP79 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.67□□□□□ -1.66
VTA1Q9NP79 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.67□□□□□ -1.66
VTA1Q9NP79 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.67□□□□□ -1.66
VTA1Q9NP79 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.67□□□□□ -1.66
VTA1Q9NP79 RNA5SP337-201ENST00000517007 109 ntBASIC4.67□□□□□ -1.66
VTA1Q9NP79 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.67□□□□□ -1.66
VTA1Q9NP79 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.67□□□□□ -1.66
VTA1Q9NP79 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
VTA1Q9NP79 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.67□□□□□ -1.66
VTA1Q9NP79 AL359212.1-201ENST00000556608 614 ntBASIC4.67□□□□□ -1.66
VTA1Q9NP79 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.67□□□□□ -1.66
VTA1Q9NP79 MTCO3P24-201ENST00000572729 782 ntBASIC4.67□□□□□ -1.66
VTA1Q9NP79 SNORD84-203ENST00000584275 78 ntBASIC4.67□□□□□ -1.66
VTA1Q9NP79 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
VTA1Q9NP79 AC092954.2-201ENST00000609103 430 ntBASIC4.67□□□□□ -1.66
VTA1Q9NP79 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.67□□□□□ -1.66
VTA1Q9NP79 MIR6500-201ENST00000622700 86 ntBASIC4.67□□□□□ -1.66
VTA1Q9NP79 AC005086.4-201ENST00000623065 213 ntBASIC4.67□□□□□ -1.66
VTA1Q9NP79 AC006065.5-201ENST00000623427 349 ntBASIC4.67□□□□□ -1.66
VTA1Q9NP79 AC112204.3-201ENST00000623822 332 ntBASIC4.67□□□□□ -1.66
VTA1Q9NP79 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
VTA1Q9NP79 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
VTA1Q9NP79 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.67□□□□□ -1.66
VTA1Q9NP79 AC068254.2-201ENST00000623938 3577 ntBASIC4.67□□□□□ -1.66
VTA1Q9NP79 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
VTA1Q9NP79 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
VTA1Q9NP79 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
VTA1Q9NP79 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.67□□□□□ -1.66
VTA1Q9NP79 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
VTA1Q9NP79 AL161912.2-201ENST00000565707 3007 ntBASIC4.67□□□□□ -1.66
VTA1Q9NP79 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
VTA1Q9NP79 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VTA1Q9NP79 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VTA1Q9NP79 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
VTA1Q9NP79 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
VTA1Q9NP79 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
VTA1Q9NP79 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
VTA1Q9NP79 SNORA60-201ENST00000362396 134 ntBASIC4.66□□□□□ -1.66
VTA1Q9NP79 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
VTA1Q9NP79 RNU4-6P-201ENST00000410804 122 ntBASIC4.66□□□□□ -1.66
VTA1Q9NP79 RNU4-78P-201ENST00000410940 126 ntBASIC4.66□□□□□ -1.66
VTA1Q9NP79 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VTA1Q9NP79 RPS12P23-201ENST00000419579 400 ntBASIC4.66□□□□□ -1.66
VTA1Q9NP79 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VTA1Q9NP79 GPR143P-201ENST00000434155 205 ntBASIC4.66□□□□□ -1.66
VTA1Q9NP79 TPT1P14-201ENST00000448018 505 ntBASIC4.66□□□□□ -1.66
VTA1Q9NP79 Z99127.3-201ENST00000448158 395 ntBASIC4.66□□□□□ -1.66
VTA1Q9NP79 RPL36AP13-201ENST00000457490 317 ntBASIC4.66□□□□□ -1.66
VTA1Q9NP79 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.66□□□□□ -1.66
VTA1Q9NP79 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.66□□□□□ -1.66
VTA1Q9NP79 RPS3AP14-201ENST00000483907 780 ntBASIC4.66□□□□□ -1.66
VTA1Q9NP79 DEFB109F-201ENST00000491870 277 ntBASIC4.66□□□□□ -1.66
VTA1Q9NP79 FCF1P3-201ENST00000496394 590 ntBASIC4.66□□□□□ -1.66
VTA1Q9NP79 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.66□□□□□ -1.66
VTA1Q9NP79 RNU6-718P-201ENST00000516166 105 ntBASIC4.66□□□□□ -1.66
VTA1Q9NP79 RNU2-10P-201ENST00000516375 211 ntBASIC4.66□□□□□ -1.66
VTA1Q9NP79 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.66□□□□□ -1.66
VTA1Q9NP79 PHBP17-201ENST00000528576 541 ntBASIC4.66□□□□□ -1.66
VTA1Q9NP79 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.66□□□□□ -1.66
VTA1Q9NP79 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.66□□□□□ -1.66
VTA1Q9NP79 OR4T1P-201ENST00000554933 911 ntBASIC4.66□□□□□ -1.66
VTA1Q9NP79 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.66□□□□□ -1.66
VTA1Q9NP79 AC092325.1-201ENST00000566449 554 ntBASIC4.66□□□□□ -1.66
VTA1Q9NP79 AC068135.2-201ENST00000569293 1028 ntBASIC4.66□□□□□ -1.66
VTA1Q9NP79 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.66□□□□□ -1.66
VTA1Q9NP79 BNIP3P22-201ENST00000593399 556 ntBASIC4.66□□□□□ -1.66
VTA1Q9NP79 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.66□□□□□ -1.66
VTA1Q9NP79 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.66□□□□□ -1.66
VTA1Q9NP79 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.66□□□□□ -1.66
VTA1Q9NP79 AC007014.2-201ENST00000615581 479 ntBASIC4.66□□□□□ -1.66
VTA1Q9NP79 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
VTA1Q9NP79 MIR3688-2-201ENST00000636963 87 ntBASIC4.66□□□□□ -1.66
VTA1Q9NP79 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
VTA1Q9NP79 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.66□□□□□ -1.66
VTA1Q9NP79 AL672167.1-203ENST00000641299 2975 ntBASIC4.66□□□□□ -1.66
VTA1Q9NP79 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.66□□□□□ -1.66
VTA1Q9NP79 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
VTA1Q9NP79 AL365440.1-201ENST00000436135 2167 ntBASIC4.65□□□□□ -1.66
VTA1Q9NP79 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
VTA1Q9NP79 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.65□□□□□ -1.66
VTA1Q9NP79 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.65□□□□□ -1.66
VTA1Q9NP79 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms