Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 AC116337.2-201ENST00000477662 156 ntBASIC2.44□□□□□ -2.02
VCX3AQ9NNX9 AL135752.1-201ENST00000479477 471 ntBASIC2.44□□□□□ -2.02
VCX3AQ9NNX9 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.44□□□□□ -2.02
VCX3AQ9NNX9 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC2.44□□□□□ -2.02
VCX3AQ9NNX9 CDC42P4-201ENST00000510507 563 ntBASIC2.44□□□□□ -2.02
VCX3AQ9NNX9 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC2.44□□□□□ -2.02
VCX3AQ9NNX9 OR5BM1P-201ENST00000512021 366 ntBASIC2.44□□□□□ -2.02
VCX3AQ9NNX9 AC091826.1-201ENST00000514065 313 ntBASIC2.44□□□□□ -2.02
VCX3AQ9NNX9 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.44□□□□□ -2.02
VCX3AQ9NNX9 SUB1P1-201ENST00000524415 382 ntBASIC2.44□□□□□ -2.02
VCX3AQ9NNX9 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.44□□□□□ -2.02
VCX3AQ9NNX9 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC2.44□□□□□ -2.02
VCX3AQ9NNX9 AC079148.1-201ENST00000565944 819 ntBASIC2.44□□□□□ -2.02
VCX3AQ9NNX9 MIR4666A-201ENST00000580160 79 ntBASIC2.44□□□□□ -2.02
VCX3AQ9NNX9 MIR4635-201ENST00000583759 79 ntBASIC2.44□□□□□ -2.02
VCX3AQ9NNX9 OR1M4P-201ENST00000589199 287 ntBASIC2.44□□□□□ -2.02
VCX3AQ9NNX9 AP003973.1-201ENST00000604639 691 ntBASIC2.44□□□□□ -2.02
VCX3AQ9NNX9 AC026741.1-201ENST00000605892 482 ntBASIC2.44□□□□□ -2.02
VCX3AQ9NNX9 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC2.44□□□□□ -2.02
VCX3AQ9NNX9 AP001521.1-201ENST00000609150 300 ntBASIC2.44□□□□□ -2.02
VCX3AQ9NNX9 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC2.44□□□□□ -2.02
VCX3AQ9NNX9 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
VCX3AQ9NNX9 VN1R74P-201ENST00000613259 503 ntBASIC2.44□□□□□ -2.02
VCX3AQ9NNX9 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC2.44□□□□□ -2.02
VCX3AQ9NNX9 UCA1.1-201ENST00000620952 75 ntBASIC2.44□□□□□ -2.02
VCX3AQ9NNX9 AC008669.1-201ENST00000565823 2178 ntBASIC2.44□□□□□ -2.02
VCX3AQ9NNX9 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC2.44□□□□□ -2.02
VCX3AQ9NNX9 Z82209.1-201ENST00000422141 2135 ntBASIC2.44□□□□□ -2.02
VCX3AQ9NNX9 SUCLA2P2-201ENST00000417269 1309 ntBASIC2.43□□□□□ -2.02
VCX3AQ9NNX9 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
VCX3AQ9NNX9 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
VCX3AQ9NNX9 RNU6-492P-201ENST00000363035 104 ntBASIC2.43□□□□□ -2.02
VCX3AQ9NNX9 SNORA71.1-201ENST00000364523 117 ntBASIC2.43□□□□□ -2.02
VCX3AQ9NNX9 RNU6-301P-201ENST00000384277 107 ntBASIC2.43□□□□□ -2.02
VCX3AQ9NNX9 MIR325-201ENST00000385260 98 ntBASIC2.43□□□□□ -2.02
VCX3AQ9NNX9 AL049693.1-201ENST00000402760 611 ntBASIC2.43□□□□□ -2.02
VCX3AQ9NNX9 MTND1P23-201ENST00000416931 372 ntBASIC2.43□□□□□ -2.02
VCX3AQ9NNX9 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.43□□□□□ -2.02
VCX3AQ9NNX9 AL358232.1-201ENST00000448030 501 ntBASIC2.43□□□□□ -2.02
VCX3AQ9NNX9 AL353718.1-201ENST00000451028 517 ntBASIC2.43□□□□□ -2.02
VCX3AQ9NNX9 RPS4XP10-201ENST00000465034 731 ntBASIC2.43□□□□□ -2.02
VCX3AQ9NNX9 RPL31P41-201ENST00000477967 372 ntBASIC2.43□□□□□ -2.02
VCX3AQ9NNX9 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.43□□□□□ -2.02
VCX3AQ9NNX9 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.43□□□□□ -2.02
VCX3AQ9NNX9 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.43□□□□□ -2.02
VCX3AQ9NNX9 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.43□□□□□ -2.02
VCX3AQ9NNX9 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.43□□□□□ -2.02
VCX3AQ9NNX9 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.43□□□□□ -2.02
VCX3AQ9NNX9 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.43□□□□□ -2.02
VCX3AQ9NNX9 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.43□□□□□ -2.02
VCX3AQ9NNX9 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.43□□□□□ -2.02
VCX3AQ9NNX9 CR383656.6-201ENST00000550518 394 ntBASIC2.43□□□□□ -2.02
VCX3AQ9NNX9 HMGB1P14-201ENST00000557424 591 ntBASIC2.43□□□□□ -2.02
VCX3AQ9NNX9 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.43□□□□□ -2.02
VCX3AQ9NNX9 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.43□□□□□ -2.02
VCX3AQ9NNX9 AL161756.2-201ENST00000604597 246 ntBASIC2.43□□□□□ -2.02
VCX3AQ9NNX9 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC2.43□□□□□ -2.02
VCX3AQ9NNX9 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC2.43□□□□□ -2.02
VCX3AQ9NNX9 AP000238.1-201ENST00000608759 426 ntBASIC2.43□□□□□ -2.02
VCX3AQ9NNX9 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC2.43□□□□□ -2.02
VCX3AQ9NNX9 AC103798.2-201ENST00000624292 632 ntBASIC2.43□□□□□ -2.02
VCX3AQ9NNX9 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.43□□□□□ -2.02
VCX3AQ9NNX9 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
VCX3AQ9NNX9 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
VCX3AQ9NNX9 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
VCX3AQ9NNX9 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
VCX3AQ9NNX9 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
VCX3AQ9NNX9 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.42□□□□□ -2.02
VCX3AQ9NNX9 AC024341.1-201ENST00000526444 1552 ntBASIC2.42□□□□□ -2.02
VCX3AQ9NNX9 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
VCX3AQ9NNX9 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.42□□□□□ -2.02
VCX3AQ9NNX9 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
VCX3AQ9NNX9 RNA5SP354-201ENST00000391247 136 ntBASIC2.42□□□□□ -2.02
VCX3AQ9NNX9 RPS3AP24-201ENST00000407896 734 ntBASIC2.42□□□□□ -2.02
VCX3AQ9NNX9 RNU6-193P-201ENST00000410977 107 ntBASIC2.42□□□□□ -2.02
VCX3AQ9NNX9 RPS29P4-201ENST00000414733 161 ntBASIC2.42□□□□□ -2.02
VCX3AQ9NNX9 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC2.42□□□□□ -2.02
VCX3AQ9NNX9 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.42□□□□□ -2.02
VCX3AQ9NNX9 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.42□□□□□ -2.02
VCX3AQ9NNX9 RPL7L1P10-201ENST00000427790 463 ntBASIC2.42□□□□□ -2.02
VCX3AQ9NNX9 WARS2P1-201ENST00000429678 537 ntBASIC2.42□□□□□ -2.02
VCX3AQ9NNX9 RNF2P1-201ENST00000442955 1010 ntBASIC2.42□□□□□ -2.02
VCX3AQ9NNX9 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.42□□□□□ -2.02
VCX3AQ9NNX9 PRDX3P3-201ENST00000447765 522 ntBASIC2.42□□□□□ -2.02
VCX3AQ9NNX9 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.42□□□□□ -2.02
VCX3AQ9NNX9 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC2.42□□□□□ -2.02
VCX3AQ9NNX9 AC092155.2-201ENST00000454675 477 ntBASIC2.42□□□□□ -2.02
VCX3AQ9NNX9 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.42□□□□□ -2.02
VCX3AQ9NNX9 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.42□□□□□ -2.02
VCX3AQ9NNX9 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC2.42□□□□□ -2.02
VCX3AQ9NNX9 TTC39CP1-201ENST00000512513 755 ntBASIC2.42□□□□□ -2.02
VCX3AQ9NNX9 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC2.42□□□□□ -2.02
VCX3AQ9NNX9 AC100870.1-201ENST00000522035 505 ntBASIC2.42□□□□□ -2.02
VCX3AQ9NNX9 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.42□□□□□ -2.02
VCX3AQ9NNX9 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
VCX3AQ9NNX9 OR8I1P-201ENST00000529291 931 ntBASIC2.42□□□□□ -2.02
VCX3AQ9NNX9 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.42□□□□□ -2.02
VCX3AQ9NNX9 MTCYBP27-201ENST00000555160 670 ntBASIC2.42□□□□□ -2.02
VCX3AQ9NNX9 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.42□□□□□ -2.02
VCX3AQ9NNX9 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms