Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.36□□□□□ -1.87
CHMP1AQ9HD42 AC004908.2-201ENST00000609090 574 ntBASIC3.36□□□□□ -1.87
CHMP1AQ9HD42 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.36□□□□□ -1.87
CHMP1AQ9HD42 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CHMP1AQ9HD42 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.36□□□□□ -1.87
CHMP1AQ9HD42 AC021755.1-201ENST00000559747 1447 ntBASIC3.36□□□□□ -1.87
CHMP1AQ9HD42 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CHMP1AQ9HD42 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CHMP1AQ9HD42 DDX10P1-201ENST00000448545 1933 ntBASIC3.35□□□□□ -1.87
CHMP1AQ9HD42 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.35□□□□□ -1.87
CHMP1AQ9HD42 FGF7P2-201ENST00000332473 296 ntBASIC3.35□□□□□ -1.87
CHMP1AQ9HD42 RNA5SP509-201ENST00000364577 119 ntBASIC3.35□□□□□ -1.87
CHMP1AQ9HD42 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.35□□□□□ -1.87
CHMP1AQ9HD42 RNU1-39P-201ENST00000383897 165 ntBASIC3.35□□□□□ -1.87
CHMP1AQ9HD42 RN7SKP142-201ENST00000411236 328 ntBASIC3.35□□□□□ -1.87
CHMP1AQ9HD42 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.35□□□□□ -1.87
CHMP1AQ9HD42 RPS7P13-201ENST00000413955 498 ntBASIC3.35□□□□□ -1.87
CHMP1AQ9HD42 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.35□□□□□ -1.87
CHMP1AQ9HD42 UBE2FP1-201ENST00000416536 447 ntBASIC3.35□□□□□ -1.87
CHMP1AQ9HD42 AC009480.2-201ENST00000422916 432 ntBASIC3.35□□□□□ -1.87
CHMP1AQ9HD42 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.35□□□□□ -1.87
CHMP1AQ9HD42 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.35□□□□□ -1.87
CHMP1AQ9HD42 BTF3P10-201ENST00000433415 495 ntBASIC3.35□□□□□ -1.87
CHMP1AQ9HD42 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.35□□□□□ -1.87
CHMP1AQ9HD42 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.35□□□□□ -1.87
CHMP1AQ9HD42 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.35□□□□□ -1.87
CHMP1AQ9HD42 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.35□□□□□ -1.87
CHMP1AQ9HD42 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.35□□□□□ -1.87
CHMP1AQ9HD42 RPL7P15-201ENST00000461190 712 ntBASIC3.35□□□□□ -1.87
CHMP1AQ9HD42 RN7SL860P-201ENST00000473738 223 ntBASIC3.35□□□□□ -1.87
CHMP1AQ9HD42 HSPE1P6-201ENST00000479457 291 ntBASIC3.35□□□□□ -1.87
CHMP1AQ9HD42 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.35□□□□□ -1.87
CHMP1AQ9HD42 RN7SKP13-201ENST00000515933 244 ntBASIC3.35□□□□□ -1.87
CHMP1AQ9HD42 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.35□□□□□ -1.87
CHMP1AQ9HD42 AC107934.1-201ENST00000522215 217 ntBASIC3.35□□□□□ -1.87
CHMP1AQ9HD42 AP003181.2-201ENST00000528941 181 ntBASIC3.35□□□□□ -1.87
CHMP1AQ9HD42 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.35□□□□□ -1.87
CHMP1AQ9HD42 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.35□□□□□ -1.87
CHMP1AQ9HD42 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.35□□□□□ -1.87
CHMP1AQ9HD42 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.35□□□□□ -1.87
CHMP1AQ9HD42 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.35□□□□□ -1.87
CHMP1AQ9HD42 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.35□□□□□ -1.87
CHMP1AQ9HD42 AC007115.1-201ENST00000546853 234 ntBASIC3.35□□□□□ -1.87
CHMP1AQ9HD42 AL157394.1-201ENST00000562983 1224 ntBASIC3.35□□□□□ -1.87
CHMP1AQ9HD42 MIR3146-201ENST00000580367 79 ntBASIC3.35□□□□□ -1.87
CHMP1AQ9HD42 MIR3118-1-201ENST00000581787 76 ntBASIC3.35□□□□□ -1.87
CHMP1AQ9HD42 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.35□□□□□ -1.87
CHMP1AQ9HD42 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.35□□□□□ -1.87
CHMP1AQ9HD42 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.35□□□□□ -1.87
CHMP1AQ9HD42 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.35□□□□□ -1.87
CHMP1AQ9HD42 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.35□□□□□ -1.87
CHMP1AQ9HD42 AC073544.2-201ENST00000601155 540 ntBASIC3.35□□□□□ -1.87
CHMP1AQ9HD42 AC011468.4-201ENST00000603942 409 ntBASIC3.35□□□□□ -1.87
CHMP1AQ9HD42 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
CHMP1AQ9HD42 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.35□□□□□ -1.87
CHMP1AQ9HD42 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
CHMP1AQ9HD42 AC005832.2-201ENST00000538921 1430 ntBASIC3.35□□□□□ -1.87
CHMP1AQ9HD42 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CHMP1AQ9HD42 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CHMP1AQ9HD42 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.34□□□□□ -1.87
CHMP1AQ9HD42 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CHMP1AQ9HD42 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.34□□□□□ -1.87
CHMP1AQ9HD42 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CHMP1AQ9HD42 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CHMP1AQ9HD42 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
CHMP1AQ9HD42 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CHMP1AQ9HD42 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CHMP1AQ9HD42 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CHMP1AQ9HD42 RNU5A-8P-201ENST00000364102 114 ntBASIC3.34□□□□□ -1.87
CHMP1AQ9HD42 RNU4-91P-201ENST00000364778 135 ntBASIC3.34□□□□□ -1.87
CHMP1AQ9HD42 RNA5SP366-201ENST00000365454 123 ntBASIC3.34□□□□□ -1.87
CHMP1AQ9HD42 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.34□□□□□ -1.87
CHMP1AQ9HD42 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
CHMP1AQ9HD42 AL109755.1-201ENST00000401791 649 ntBASIC3.34□□□□□ -1.87
CHMP1AQ9HD42 Y_RNA.598-201ENST00000410480 95 ntBASIC3.34□□□□□ -1.87
CHMP1AQ9HD42 SEPT2P1-201ENST00000419651 180 ntBASIC3.34□□□□□ -1.87
CHMP1AQ9HD42 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.34□□□□□ -1.87
CHMP1AQ9HD42 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.34□□□□□ -1.87
CHMP1AQ9HD42 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.34□□□□□ -1.87
CHMP1AQ9HD42 TIMM9P1-201ENST00000436122 256 ntBASIC3.34□□□□□ -1.87
CHMP1AQ9HD42 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.34□□□□□ -1.87
CHMP1AQ9HD42 RPL17P49-201ENST00000443728 411 ntBASIC3.34□□□□□ -1.87
CHMP1AQ9HD42 RANP8-201ENST00000444720 713 ntBASIC3.34□□□□□ -1.87
CHMP1AQ9HD42 AL592447.1-201ENST00000447592 540 ntBASIC3.34□□□□□ -1.87
CHMP1AQ9HD42 ST13P20-201ENST00000447996 1065 ntBASIC3.34□□□□□ -1.87
CHMP1AQ9HD42 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.34□□□□□ -1.87
CHMP1AQ9HD42 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.34□□□□□ -1.87
CHMP1AQ9HD42 RNU7-59P-201ENST00000459101 61 ntBASIC3.34□□□□□ -1.87
CHMP1AQ9HD42 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.34□□□□□ -1.87
CHMP1AQ9HD42 UQCRHP4-201ENST00000471686 272 ntBASIC3.34□□□□□ -1.87
CHMP1AQ9HD42 AC041039.1-201ENST00000485656 536 ntBASIC3.34□□□□□ -1.87
CHMP1AQ9HD42 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.34□□□□□ -1.87
CHMP1AQ9HD42 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.34□□□□□ -1.87
CHMP1AQ9HD42 AC105313.1-201ENST00000509121 353 ntBASIC3.34□□□□□ -1.87
CHMP1AQ9HD42 AC010265.1-201ENST00000513509 211 ntBASIC3.34□□□□□ -1.87
CHMP1AQ9HD42 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.34□□□□□ -1.87
CHMP1AQ9HD42 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.34□□□□□ -1.87
CHMP1AQ9HD42 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.34□□□□□ -1.87
CHMP1AQ9HD42 AL391156.1-201ENST00000554965 554 ntBASIC3.34□□□□□ -1.87
CHMP1AQ9HD42 AC068831.4-201ENST00000556118 109 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms