Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 BNIP3P39-201ENST00000601077 554 ntBASIC3.21□□□□□ -1.9
DDX47Q9H0S4 AC106052.1-201ENST00000608029 497 ntBASIC3.21□□□□□ -1.9
DDX47Q9H0S4 AL590099.1-201ENST00000615276 138 ntBASIC3.21□□□□□ -1.9
DDX47Q9H0S4 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.21□□□□□ -1.9
DDX47Q9H0S4 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.21□□□□□ -1.9
DDX47Q9H0S4 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.21□□□□□ -1.9
DDX47Q9H0S4 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
DDX47Q9H0S4 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.2□□□□□ -1.9
DDX47Q9H0S4 CUL1P1-201ENST00000509510 2425 ntBASIC3.2□□□□□ -1.9
DDX47Q9H0S4 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.2□□□□□ -1.9
DDX47Q9H0S4 AC093908.1-201ENST00000623125 8092 ntBASIC3.2□□□□□ -1.9
DDX47Q9H0S4 OR1S2-201ENST00000302592 978 ntBASIC3.2□□□□□ -1.9
DDX47Q9H0S4 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
DDX47Q9H0S4 MIR670-201ENST00000390142 98 ntBASIC3.2□□□□□ -1.9
DDX47Q9H0S4 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.2□□□□□ -1.9
DDX47Q9H0S4 BMS1P22-201ENST00000414726 313 ntBASIC3.2□□□□□ -1.9
DDX47Q9H0S4 MRPL50P2-201ENST00000416821 482 ntBASIC3.2□□□□□ -1.9
DDX47Q9H0S4 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.2□□□□□ -1.9
DDX47Q9H0S4 AL389915.1-201ENST00000422463 466 ntBASIC3.2□□□□□ -1.9
DDX47Q9H0S4 AL353705.1-201ENST00000433468 480 ntBASIC3.2□□□□□ -1.9
DDX47Q9H0S4 USP9YP24-201ENST00000434374 697 ntBASIC3.2□□□□□ -1.9
DDX47Q9H0S4 THAP5P1-201ENST00000439089 262 ntBASIC3.2□□□□□ -1.9
DDX47Q9H0S4 USP9YP17-201ENST00000444617 696 ntBASIC3.2□□□□□ -1.9
DDX47Q9H0S4 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.2□□□□□ -1.9
DDX47Q9H0S4 AC002381.1-201ENST00000447049 280 ntBASIC3.2□□□□□ -1.9
DDX47Q9H0S4 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
DDX47Q9H0S4 AC092155.2-201ENST00000454675 477 ntBASIC3.2□□□□□ -1.9
DDX47Q9H0S4 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.2□□□□□ -1.9
DDX47Q9H0S4 RN7SL633P-201ENST00000488974 297 ntBASIC3.2□□□□□ -1.9
DDX47Q9H0S4 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.2□□□□□ -1.9
DDX47Q9H0S4 VN1R104P-201ENST00000505115 1009 ntBASIC3.2□□□□□ -1.9
DDX47Q9H0S4 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.2□□□□□ -1.9
DDX47Q9H0S4 MTND4LP22-201ENST00000508209 276 ntBASIC3.2□□□□□ -1.9
DDX47Q9H0S4 AC022483.1-201ENST00000514020 567 ntBASIC3.2□□□□□ -1.9
DDX47Q9H0S4 RNU6-150P-201ENST00000516237 95 ntBASIC3.2□□□□□ -1.9
DDX47Q9H0S4 RNU6-711P-201ENST00000517255 106 ntBASIC3.2□□□□□ -1.9
DDX47Q9H0S4 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.2□□□□□ -1.9
DDX47Q9H0S4 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.2□□□□□ -1.9
DDX47Q9H0S4 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.2□□□□□ -1.9
DDX47Q9H0S4 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.2□□□□□ -1.9
DDX47Q9H0S4 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.2□□□□□ -1.9
DDX47Q9H0S4 AP002826.1-201ENST00000608835 315 ntBASIC3.2□□□□□ -1.9
DDX47Q9H0S4 AL392048.1-201ENST00000613946 534 ntBASIC3.2□□□□□ -1.9
DDX47Q9H0S4 AL355365.1-201ENST00000616480 294 ntBASIC3.2□□□□□ -1.9
DDX47Q9H0S4 AC084035.1-201ENST00000634543 607 ntBASIC3.2□□□□□ -1.9
DDX47Q9H0S4 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.2□□□□□ -1.9
DDX47Q9H0S4 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.2□□□□□ -1.9
DDX47Q9H0S4 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
DDX47Q9H0S4 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.19□□□□□ -1.9
DDX47Q9H0S4 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.19□□□□□ -1.9
DDX47Q9H0S4 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
DDX47Q9H0S4 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
DDX47Q9H0S4 RNU4-92P-201ENST00000363783 136 ntBASIC3.19□□□□□ -1.9
DDX47Q9H0S4 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.19□□□□□ -1.9
DDX47Q9H0S4 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
DDX47Q9H0S4 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.19□□□□□ -1.9
DDX47Q9H0S4 RNA5SP274-201ENST00000410484 108 ntBASIC3.19□□□□□ -1.9
DDX47Q9H0S4 RNA5SP38-201ENST00000410750 119 ntBASIC3.19□□□□□ -1.9
DDX47Q9H0S4 MTCO2P8-201ENST00000412213 658 ntBASIC3.19□□□□□ -1.9
DDX47Q9H0S4 AL953862.1-201ENST00000423016 168 ntBASIC3.19□□□□□ -1.9
DDX47Q9H0S4 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.19□□□□□ -1.9
DDX47Q9H0S4 HMGN2P31-201ENST00000432430 273 ntBASIC3.19□□□□□ -1.9
DDX47Q9H0S4 RPL26P6-201ENST00000440913 438 ntBASIC3.19□□□□□ -1.9
DDX47Q9H0S4 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.19□□□□□ -1.9
DDX47Q9H0S4 RPL36AP33-201ENST00000450395 310 ntBASIC3.19□□□□□ -1.9
DDX47Q9H0S4 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.19□□□□□ -1.9
DDX47Q9H0S4 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.19□□□□□ -1.9
DDX47Q9H0S4 AC008155.2-201ENST00000464337 397 ntBASIC3.19□□□□□ -1.9
DDX47Q9H0S4 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.19□□□□□ -1.9
DDX47Q9H0S4 SLC25A15P5-201ENST00000508033 253 ntBASIC3.19□□□□□ -1.9
DDX47Q9H0S4 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.19□□□□□ -1.9
DDX47Q9H0S4 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.19□□□□□ -1.9
DDX47Q9H0S4 RNU6-528P-201ENST00000516926 100 ntBASIC3.19□□□□□ -1.9
DDX47Q9H0S4 DUXAP2-201ENST00000519198 589 ntBASIC3.19□□□□□ -1.9
DDX47Q9H0S4 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.19□□□□□ -1.9
DDX47Q9H0S4 COX6CP8-201ENST00000522620 226 ntBASIC3.19□□□□□ -1.9
DDX47Q9H0S4 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.19□□□□□ -1.9
DDX47Q9H0S4 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.19□□□□□ -1.9
DDX47Q9H0S4 OR6C7P-201ENST00000547875 934 ntBASIC3.19□□□□□ -1.9
DDX47Q9H0S4 AC005951.1-201ENST00000576706 485 ntBASIC3.19□□□□□ -1.9
DDX47Q9H0S4 AC105224.1-201ENST00000587055 421 ntBASIC3.19□□□□□ -1.9
DDX47Q9H0S4 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.19□□□□□ -1.9
DDX47Q9H0S4 BBIP1P1-201ENST00000602999 279 ntBASIC3.19□□□□□ -1.9
DDX47Q9H0S4 RPP40P2-201ENST00000603596 712 ntBASIC3.19□□□□□ -1.9
DDX47Q9H0S4 AC009220.3-201ENST00000604318 586 ntBASIC3.19□□□□□ -1.9
DDX47Q9H0S4 MIR92B-201ENST00000607575 96 ntBASIC3.19□□□□□ -1.9
DDX47Q9H0S4 AC092953.2-201ENST00000608000 699 ntBASIC3.19□□□□□ -1.9
DDX47Q9H0S4 DUXAP10-204ENST00000612052 616 ntBASIC3.19□□□□□ -1.9
DDX47Q9H0S4 AC006386.1-201ENST00000619436 415 ntBASIC3.19□□□□□ -1.9
DDX47Q9H0S4 AC011330.2-201ENST00000621680 635 ntBASIC3.19□□□□□ -1.9
DDX47Q9H0S4 AC006111.3-201ENST00000622137 383 ntBASIC3.19□□□□□ -1.9
DDX47Q9H0S4 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.19□□□□□ -1.9
DDX47Q9H0S4 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.19□□□□□ -1.9
DDX47Q9H0S4 AC090897.3-201ENST00000636973 1157 ntBASIC3.19□□□□□ -1.9
DDX47Q9H0S4 LRRC77P-213ENST00000637727 880 ntBASIC3.19□□□□□ -1.9
DDX47Q9H0S4 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.19□□□□□ -1.9
DDX47Q9H0S4 MAPK10-322ENST00000641485 4530 ntBASIC3.19□□□□□ -1.9
DDX47Q9H0S4 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.19□□□□□ -1.9
DDX47Q9H0S4 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.18□□□□□ -1.9
DDX47Q9H0S4 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms