Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
UBE2OQ9C0C9 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
UBE2OQ9C0C9 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
UBE2OQ9C0C9 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
UBE2OQ9C0C9 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.66□□□□□ -1.5
UBE2OQ9C0C9 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.66□□□□□ -1.5
UBE2OQ9C0C9 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
UBE2OQ9C0C9 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.66□□□□□ -1.5
UBE2OQ9C0C9 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
UBE2OQ9C0C9 RNU6-562P-201ENST00000362731 107 ntBASIC5.66□□□□□ -1.5
UBE2OQ9C0C9 RN7SKP145-201ENST00000363291 303 ntBASIC5.66□□□□□ -1.5
UBE2OQ9C0C9 SNORA66-201ENST00000384792 133 ntBASIC5.66□□□□□ -1.5
UBE2OQ9C0C9 RNU6-823P-201ENST00000391042 103 ntBASIC5.66□□□□□ -1.5
UBE2OQ9C0C9 MIR450B-201ENST00000401182 78 ntBASIC5.66□□□□□ -1.5
UBE2OQ9C0C9 RN7SKP114-201ENST00000410327 279 ntBASIC5.66□□□□□ -1.5
UBE2OQ9C0C9 Y_RNA.594-201ENST00000410373 140 ntBASIC5.66□□□□□ -1.5
UBE2OQ9C0C9 RNU4-46P-201ENST00000410818 138 ntBASIC5.66□□□□□ -1.5
UBE2OQ9C0C9 AC114491.1-201ENST00000416095 246 ntBASIC5.66□□□□□ -1.5
UBE2OQ9C0C9 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC5.66□□□□□ -1.5
UBE2OQ9C0C9 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC5.66□□□□□ -1.5
UBE2OQ9C0C9 EIF4EP1-201ENST00000422311 642 ntBASIC5.66□□□□□ -1.5
UBE2OQ9C0C9 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.66□□□□□ -1.5
UBE2OQ9C0C9 AP000936.3-201ENST00000438127 255 ntBASIC5.66□□□□□ -1.5
UBE2OQ9C0C9 RPS29P10-201ENST00000439197 166 ntBASIC5.66□□□□□ -1.5
UBE2OQ9C0C9 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.66□□□□□ -1.5
UBE2OQ9C0C9 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.66□□□□□ -1.5
UBE2OQ9C0C9 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC5.66□□□□□ -1.5
UBE2OQ9C0C9 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC5.66□□□□□ -1.5
UBE2OQ9C0C9 AC034236.1-201ENST00000469891 373 ntBASIC5.66□□□□□ -1.5
UBE2OQ9C0C9 AC093767.1-201ENST00000504523 156 ntBASIC5.66□□□□□ -1.5
UBE2OQ9C0C9 AC023157.2-201ENST00000540596 141 ntBASIC5.66□□□□□ -1.5
UBE2OQ9C0C9 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
UBE2OQ9C0C9 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.66□□□□□ -1.5
UBE2OQ9C0C9 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.66□□□□□ -1.5
UBE2OQ9C0C9 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC5.66□□□□□ -1.5
UBE2OQ9C0C9 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.66□□□□□ -1.5
UBE2OQ9C0C9 MIR8062-201ENST00000621515 85 ntBASIC5.66□□□□□ -1.5
UBE2OQ9C0C9 AC139713.2-214ENST00000642059 1811 ntBASIC5.66□□□□□ -1.5
UBE2OQ9C0C9 AL592148.3-201ENST00000608771 2646 ntBASIC5.66□□□□□ -1.5
UBE2OQ9C0C9 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.66□□□□□ -1.5
UBE2OQ9C0C9 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
UBE2OQ9C0C9 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.66□□□□□ -1.5
UBE2OQ9C0C9 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
UBE2OQ9C0C9 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.66□□□□□ -1.5
UBE2OQ9C0C9 PROS2P-201ENST00000474651 1951 ntBASIC5.66□□□□□ -1.5
UBE2OQ9C0C9 AC073136.1-201ENST00000449426 2884 ntBASIC5.65□□□□□ -1.5
UBE2OQ9C0C9 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.65□□□□□ -1.5
UBE2OQ9C0C9 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
UBE2OQ9C0C9 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
UBE2OQ9C0C9 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
UBE2OQ9C0C9 AL022311.1-201ENST00000623726 19416 ntBASIC5.65□□□□□ -1.5
UBE2OQ9C0C9 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
UBE2OQ9C0C9 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.65□□□□□ -1.5
UBE2OQ9C0C9 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
UBE2OQ9C0C9 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.65□□□□□ -1.5
UBE2OQ9C0C9 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
UBE2OQ9C0C9 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
UBE2OQ9C0C9 AL359837.1-201ENST00000381357 287 ntBASIC5.65□□□□□ -1.5
UBE2OQ9C0C9 RNU6-472P-201ENST00000384299 107 ntBASIC5.65□□□□□ -1.5
UBE2OQ9C0C9 Y_RNA.493-201ENST00000384422 102 ntBASIC5.65□□□□□ -1.5
UBE2OQ9C0C9 RNU6-1050P-201ENST00000410388 107 ntBASIC5.65□□□□□ -1.5
UBE2OQ9C0C9 E2F6P2-201ENST00000420708 748 ntBASIC5.65□□□□□ -1.5
UBE2OQ9C0C9 RPL36AP6-201ENST00000435770 321 ntBASIC5.65□□□□□ -1.5
UBE2OQ9C0C9 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.65□□□□□ -1.5
UBE2OQ9C0C9 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC5.65□□□□□ -1.5
UBE2OQ9C0C9 OR1H1P-201ENST00000448731 937 ntBASIC5.65□□□□□ -1.5
UBE2OQ9C0C9 HMGB3P21-201ENST00000452483 547 ntBASIC5.65□□□□□ -1.5
UBE2OQ9C0C9 AC002553.2-201ENST00000453217 340 ntBASIC5.65□□□□□ -1.5
UBE2OQ9C0C9 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
UBE2OQ9C0C9 AC022034.3-201ENST00000471393 478 ntBASIC5.65□□□□□ -1.5
UBE2OQ9C0C9 AL139099.1-201ENST00000497398 403 ntBASIC5.65□□□□□ -1.5
UBE2OQ9C0C9 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.65□□□□□ -1.5
UBE2OQ9C0C9 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC5.65□□□□□ -1.5
UBE2OQ9C0C9 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.65□□□□□ -1.5
UBE2OQ9C0C9 AL355297.3-201ENST00000604082 446 ntBASIC5.65□□□□□ -1.5
UBE2OQ9C0C9 AC137590.2-201ENST00000619709 240 ntBASIC5.65□□□□□ -1.5
UBE2OQ9C0C9 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
UBE2OQ9C0C9 AC091812.1-201ENST00000432235 1948 ntBASIC5.65□□□□□ -1.51
UBE2OQ9C0C9 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
UBE2OQ9C0C9 TPTE2P4-201ENST00000258589 1605 ntBASIC5.65□□□□□ -1.51
UBE2OQ9C0C9 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.51
UBE2OQ9C0C9 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.51
UBE2OQ9C0C9 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
UBE2OQ9C0C9 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
UBE2OQ9C0C9 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.65□□□□□ -1.51
UBE2OQ9C0C9 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
UBE2OQ9C0C9 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
UBE2OQ9C0C9 ABCC13-202ENST00000463099 3842 ntBASIC5.64□□□□□ -1.51
UBE2OQ9C0C9 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
UBE2OQ9C0C9 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.64□□□□□ -1.51
UBE2OQ9C0C9 AC104964.3-201ENST00000606115 2860 ntBASIC5.64□□□□□ -1.51
UBE2OQ9C0C9 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.64□□□□□ -1.51
UBE2OQ9C0C9 RNU6-1287P-201ENST00000362914 107 ntBASIC5.64□□□□□ -1.51
UBE2OQ9C0C9 RHOT1P2-201ENST00000366423 333 ntBASIC5.64□□□□□ -1.51
UBE2OQ9C0C9 Y_RNA.428-201ENST00000384078 102 ntBASIC5.64□□□□□ -1.51
UBE2OQ9C0C9 RNU6-1060P-201ENST00000384664 107 ntBASIC5.64□□□□□ -1.51
UBE2OQ9C0C9 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
UBE2OQ9C0C9 RNA5SP219-201ENST00000390940 113 ntBASIC5.64□□□□□ -1.51
UBE2OQ9C0C9 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.64□□□□□ -1.51
UBE2OQ9C0C9 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms