Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC016716.1-201ENST00000265882 708 ntBASIC2.51□□□□□ -2.01
TRIM4Q9C037 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
TRIM4Q9C037 RNA5SP210-201ENST00000391034 120 ntBASIC2.51□□□□□ -2.01
TRIM4Q9C037 SFR1P1-201ENST00000403720 688 ntBASIC2.51□□□□□ -2.01
TRIM4Q9C037 DHFRP5-201ENST00000406944 564 ntBASIC2.51□□□□□ -2.01
TRIM4Q9C037 RNA5SP38-201ENST00000410750 119 ntBASIC2.51□□□□□ -2.01
TRIM4Q9C037 MTND1P23-201ENST00000416931 372 ntBASIC2.51□□□□□ -2.01
TRIM4Q9C037 AL137014.1-201ENST00000420490 1226 ntBASIC2.51□□□□□ -2.01
TRIM4Q9C037 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
TRIM4Q9C037 AL353705.4-201ENST00000449661 238 ntBASIC2.51□□□□□ -2.01
TRIM4Q9C037 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.51□□□□□ -2.01
TRIM4Q9C037 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.51□□□□□ -2.01
TRIM4Q9C037 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
TRIM4Q9C037 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.51□□□□□ -2.01
TRIM4Q9C037 MIR4648-201ENST00000580107 72 ntBASIC2.51□□□□□ -2.01
TRIM4Q9C037 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.51□□□□□ -2.01
TRIM4Q9C037 AC135178.6-201ENST00000605314 398 ntBASIC2.51□□□□□ -2.01
TRIM4Q9C037 AC245517.5-201ENST00000611529 162 ntBASIC2.51□□□□□ -2.01
TRIM4Q9C037 AC079597.1-201ENST00000624306 508 ntBASIC2.51□□□□□ -2.01
TRIM4Q9C037 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.51□□□□□ -2.01
TRIM4Q9C037 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC2.51□□□□□ -2.01
TRIM4Q9C037 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
TRIM4Q9C037 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
TRIM4Q9C037 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
TRIM4Q9C037 Y_RNA.493-201ENST00000384422 102 ntBASIC2.5□□□□□ -2.01
TRIM4Q9C037 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
TRIM4Q9C037 DSTNP4-201ENST00000399472 474 ntBASIC2.5□□□□□ -2.01
TRIM4Q9C037 RNA5SP425-201ENST00000410336 112 ntBASIC2.5□□□□□ -2.01
TRIM4Q9C037 FO393419.3-201ENST00000428741 282 ntBASIC2.5□□□□□ -2.01
TRIM4Q9C037 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.5□□□□□ -2.01
TRIM4Q9C037 AC092427.1-202ENST00000430569 476 ntBASIC2.5□□□□□ -2.01
TRIM4Q9C037 RPL36P19-201ENST00000430744 301 ntBASIC2.5□□□□□ -2.01
TRIM4Q9C037 AL139415.2-201ENST00000431968 163 ntBASIC2.5□□□□□ -2.01
TRIM4Q9C037 HMGN2P3-201ENST00000433603 273 ntBASIC2.5□□□□□ -2.01
TRIM4Q9C037 HMGN2P5-201ENST00000436882 273 ntBASIC2.5□□□□□ -2.01
TRIM4Q9C037 AL031659.1-201ENST00000447075 539 ntBASIC2.5□□□□□ -2.01
TRIM4Q9C037 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.5□□□□□ -2.01
TRIM4Q9C037 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.5□□□□□ -2.01
TRIM4Q9C037 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.5□□□□□ -2.01
TRIM4Q9C037 AC093770.1-201ENST00000511559 571 ntBASIC2.5□□□□□ -2.01
TRIM4Q9C037 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
TRIM4Q9C037 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
TRIM4Q9C037 AC087241.2-201ENST00000535801 324 ntBASIC2.5□□□□□ -2.01
TRIM4Q9C037 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.5□□□□□ -2.01
TRIM4Q9C037 AC074029.2-201ENST00000551045 634 ntBASIC2.5□□□□□ -2.01
TRIM4Q9C037 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.5□□□□□ -2.01
TRIM4Q9C037 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.5□□□□□ -2.01
TRIM4Q9C037 NUTF2P8-201ENST00000604593 363 ntBASIC2.5□□□□□ -2.01
TRIM4Q9C037 AC008277.2-201ENST00000605196 797 ntBASIC2.5□□□□□ -2.01
TRIM4Q9C037 MIR6840-201ENST00000611937 71 ntBASIC2.5□□□□□ -2.01
TRIM4Q9C037 AL391597.1-201ENST00000618707 694 ntBASIC2.5□□□□□ -2.01
TRIM4Q9C037 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
TRIM4Q9C037 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
TRIM4Q9C037 OR4G2P-202ENST00000641004 1759 ntBASIC2.49□□□□□ -2.01
TRIM4Q9C037 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
TRIM4Q9C037 AL512646.1-201ENST00000269395 1077 ntBASIC2.49□□□□□ -2.01
TRIM4Q9C037 Y_RNA.226-201ENST00000364337 114 ntBASIC2.49□□□□□ -2.01
TRIM4Q9C037 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
TRIM4Q9C037 MIR27B-201ENST00000385129 97 ntBASIC2.49□□□□□ -2.01
TRIM4Q9C037 MIR9-1-201ENST00000385198 89 ntBASIC2.49□□□□□ -2.01
TRIM4Q9C037 MT-TC-201ENST00000387405 66 ntBASIC2.49□□□□□ -2.01
TRIM4Q9C037 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
TRIM4Q9C037 RNA5SP56-201ENST00000410277 118 ntBASIC2.49□□□□□ -2.01
TRIM4Q9C037 RNU4-53P-201ENST00000410828 140 ntBASIC2.49□□□□□ -2.01
TRIM4Q9C037 AC096533.1-201ENST00000411645 353 ntBASIC2.49□□□□□ -2.01
TRIM4Q9C037 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
TRIM4Q9C037 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.49□□□□□ -2.01
TRIM4Q9C037 AC096632.1-201ENST00000427395 310 ntBASIC2.49□□□□□ -2.01
TRIM4Q9C037 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
TRIM4Q9C037 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.49□□□□□ -2.01
TRIM4Q9C037 ZNF736P6Y-201ENST00000447526 1213 ntBASIC2.49□□□□□ -2.01
TRIM4Q9C037 AC015908.1-201ENST00000478739 476 ntBASIC2.49□□□□□ -2.01
TRIM4Q9C037 BLNK-209ENST00000495266 440 ntTSL 5 BASIC2.49□□□□□ -2.01
TRIM4Q9C037 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.49□□□□□ -2.01
TRIM4Q9C037 AC096725.1-201ENST00000514266 313 ntBASIC2.49□□□□□ -2.01
TRIM4Q9C037 RNA5SP282-201ENST00000516355 108 ntBASIC2.49□□□□□ -2.01
TRIM4Q9C037 AC100870.1-201ENST00000522035 505 ntBASIC2.49□□□□□ -2.01
TRIM4Q9C037 ERHP1-201ENST00000523006 310 ntBASIC2.49□□□□□ -2.01
TRIM4Q9C037 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.49□□□□□ -2.01
TRIM4Q9C037 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC2.49□□□□□ -2.01
TRIM4Q9C037 AC087481.2-201ENST00000565492 330 ntBASIC2.49□□□□□ -2.01
TRIM4Q9C037 MIR4635-201ENST00000583759 79 ntBASIC2.49□□□□□ -2.01
TRIM4Q9C037 AL669831.4-202ENST00000590817 238 ntBASIC2.49□□□□□ -2.01
TRIM4Q9C037 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.49□□□□□ -2.01
TRIM4Q9C037 XIAPP1-201ENST00000603162 600 ntBASIC2.49□□□□□ -2.01
TRIM4Q9C037 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.49□□□□□ -2.01
TRIM4Q9C037 VN1R7P-201ENST00000619242 903 ntBASIC2.49□□□□□ -2.01
TRIM4Q9C037 AC095031.1-201ENST00000623685 672 ntBASIC2.49□□□□□ -2.01
TRIM4Q9C037 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
TRIM4Q9C037 CYP3A51P-201ENST00000633513 256 ntBASIC2.49□□□□□ -2.01
TRIM4Q9C037 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.49□□□□□ -2.01
TRIM4Q9C037 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
TRIM4Q9C037 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.48□□□□□ -2.01
TRIM4Q9C037 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
TRIM4Q9C037 RPL21P132-201ENST00000331267 462 ntBASIC2.48□□□□□ -2.01
TRIM4Q9C037 Y_RNA.140-201ENST00000363474 103 ntBASIC2.48□□□□□ -2.01
TRIM4Q9C037 AL450338.1-201ENST00000407987 512 ntBASIC2.48□□□□□ -2.01
TRIM4Q9C037 OFD1P18Y-201ENST00000420889 959 ntBASIC2.48□□□□□ -2.01
TRIM4Q9C037 MTCO1P39-201ENST00000426148 480 ntBASIC2.48□□□□□ -2.01
TRIM4Q9C037 WARS2P1-201ENST00000429678 537 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms