Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 UBTFL10-201ENST00000528532 562 ntBASIC2.87□□□□□ -1.95
UPF3BQ9BZI7 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.87□□□□□ -1.95
UPF3BQ9BZI7 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.87□□□□□ -1.95
UPF3BQ9BZI7 CKS1BP1-201ENST00000555221 240 ntBASIC2.87□□□□□ -1.95
UPF3BQ9BZI7 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.87□□□□□ -1.95
UPF3BQ9BZI7 AC009063.1-201ENST00000563342 702 ntBASIC2.87□□□□□ -1.95
UPF3BQ9BZI7 AC027104.1-201ENST00000563702 681 ntBASIC2.87□□□□□ -1.95
UPF3BQ9BZI7 AC087481.2-201ENST00000565492 330 ntBASIC2.87□□□□□ -1.95
UPF3BQ9BZI7 TPMTP1-201ENST00000592307 737 ntBASIC2.87□□□□□ -1.95
UPF3BQ9BZI7 AC128687.1-201ENST00000605304 619 ntBASIC2.87□□□□□ -1.95
UPF3BQ9BZI7 AC009570.1-201ENST00000609599 745 ntBASIC2.87□□□□□ -1.95
UPF3BQ9BZI7 AC009032.1-201ENST00000617574 431 ntBASIC2.87□□□□□ -1.95
UPF3BQ9BZI7 SNHG22-203ENST00000617833 660 ntBASIC2.87□□□□□ -1.95
UPF3BQ9BZI7 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.87□□□□□ -1.95
UPF3BQ9BZI7 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.87□□□□□ -1.95
UPF3BQ9BZI7 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.87□□□□□ -1.95
UPF3BQ9BZI7 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
UPF3BQ9BZI7 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
UPF3BQ9BZI7 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
UPF3BQ9BZI7 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
UPF3BQ9BZI7 RNU6-1226P-201ENST00000384317 107 ntBASIC2.86□□□□□ -1.95
UPF3BQ9BZI7 Y_RNA.493-201ENST00000384422 102 ntBASIC2.86□□□□□ -1.95
UPF3BQ9BZI7 SNORA41-201ENST00000384675 132 ntBASIC2.86□□□□□ -1.95
UPF3BQ9BZI7 ATP5F1P6-201ENST00000402768 767 ntBASIC2.86□□□□□ -1.95
UPF3BQ9BZI7 RNA5SP38-201ENST00000410750 119 ntBASIC2.86□□□□□ -1.95
UPF3BQ9BZI7 RNU4-53P-201ENST00000410828 140 ntBASIC2.86□□□□□ -1.95
UPF3BQ9BZI7 AC092745.2-202ENST00000411880 369 ntBASIC2.86□□□□□ -1.95
UPF3BQ9BZI7 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC2.86□□□□□ -1.95
UPF3BQ9BZI7 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC2.86□□□□□ -1.95
UPF3BQ9BZI7 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC2.86□□□□□ -1.95
UPF3BQ9BZI7 FABP5P3-201ENST00000437960 408 ntBASIC2.86□□□□□ -1.95
UPF3BQ9BZI7 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC2.86□□□□□ -1.95
UPF3BQ9BZI7 AL353705.4-201ENST00000449661 238 ntBASIC2.86□□□□□ -1.95
UPF3BQ9BZI7 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC2.86□□□□□ -1.95
UPF3BQ9BZI7 AP000852.1-201ENST00000472460 573 ntBASIC2.86□□□□□ -1.95
UPF3BQ9BZI7 RPL36AP51-201ENST00000487216 318 ntBASIC2.86□□□□□ -1.95
UPF3BQ9BZI7 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.86□□□□□ -1.95
UPF3BQ9BZI7 CASP1-212ENST00000531166 300 ntTSL 5 BASIC2.86□□□□□ -1.95
UPF3BQ9BZI7 OR5BN1P-201ENST00000532955 829 ntBASIC2.86□□□□□ -1.95
UPF3BQ9BZI7 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.86□□□□□ -1.95
UPF3BQ9BZI7 AC027176.1-201ENST00000560204 514 ntBASIC2.86□□□□□ -1.95
UPF3BQ9BZI7 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.86□□□□□ -1.95
UPF3BQ9BZI7 AC019159.1-201ENST00000605094 187 ntBASIC2.86□□□□□ -1.95
UPF3BQ9BZI7 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC2.86□□□□□ -1.95
UPF3BQ9BZI7 AC017104.5-201ENST00000637647 639 ntBASIC2.86□□□□□ -1.95
UPF3BQ9BZI7 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
UPF3BQ9BZI7 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.86□□□□□ -1.95
UPF3BQ9BZI7 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.86□□□□□ -1.95
UPF3BQ9BZI7 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.86□□□□□ -1.95
UPF3BQ9BZI7 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.85□□□□□ -1.95
UPF3BQ9BZI7 RNVU1-3-201ENST00000364313 161 ntBASIC2.85□□□□□ -1.95
UPF3BQ9BZI7 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
UPF3BQ9BZI7 CD24P4-201ENST00000382840 243 ntBASIC2.85□□□□□ -1.95
UPF3BQ9BZI7 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
UPF3BQ9BZI7 AC092638.1-201ENST00000411966 1275 ntBASIC2.85□□□□□ -1.95
UPF3BQ9BZI7 AL096701.2-201ENST00000416920 238 ntBASIC2.85□□□□□ -1.95
UPF3BQ9BZI7 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.85□□□□□ -1.95
UPF3BQ9BZI7 AC073310.1-201ENST00000423226 1033 ntBASIC2.85□□□□□ -1.95
UPF3BQ9BZI7 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
UPF3BQ9BZI7 SUMO1P4-201ENST00000429430 302 ntBASIC2.85□□□□□ -1.95
UPF3BQ9BZI7 RPL23AP23-201ENST00000452590 471 ntBASIC2.85□□□□□ -1.95
UPF3BQ9BZI7 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
UPF3BQ9BZI7 AC092436.1-201ENST00000506450 503 ntBASIC2.85□□□□□ -1.95
UPF3BQ9BZI7 AC009901.1-201ENST00000506703 541 ntBASIC2.85□□□□□ -1.95
UPF3BQ9BZI7 AC112673.1-201ENST00000513168 575 ntBASIC2.85□□□□□ -1.95
UPF3BQ9BZI7 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.85□□□□□ -1.95
UPF3BQ9BZI7 AP003467.2-201ENST00000520175 319 ntBASIC2.85□□□□□ -1.95
UPF3BQ9BZI7 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.85□□□□□ -1.95
UPF3BQ9BZI7 COX6CP3-201ENST00000580869 223 ntBASIC2.85□□□□□ -1.95
UPF3BQ9BZI7 DNAJC19P3-201ENST00000594491 331 ntBASIC2.85□□□□□ -1.95
UPF3BQ9BZI7 AC004775.1-201ENST00000607389 753 ntBASIC2.85□□□□□ -1.95
UPF3BQ9BZI7 AC025016.1-201ENST00000616746 682 ntBASIC2.85□□□□□ -1.95
UPF3BQ9BZI7 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.85□□□□□ -1.95
UPF3BQ9BZI7 U4.3-201ENST00000621047 82 ntBASIC2.85□□□□□ -1.95
UPF3BQ9BZI7 AC024595.1-201ENST00000623088 387 ntBASIC2.85□□□□□ -1.95
UPF3BQ9BZI7 AC002064.3-201ENST00000623448 346 ntBASIC2.85□□□□□ -1.95
UPF3BQ9BZI7 AC083865.1-201ENST00000636634 831 ntBASIC2.85□□□□□ -1.95
UPF3BQ9BZI7 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.85□□□□□ -1.95
UPF3BQ9BZI7 AC099654.7-201ENST00000635788 2127 ntBASIC2.84□□□□□ -1.95
UPF3BQ9BZI7 AC080128.1-201ENST00000474389 1917 ntBASIC2.84□□□□□ -1.95
UPF3BQ9BZI7 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.95
UPF3BQ9BZI7 RNU6-263P-201ENST00000363811 107 ntBASIC2.84□□□□□ -1.95
UPF3BQ9BZI7 RNU1-138P-201ENST00000384093 164 ntBASIC2.84□□□□□ -1.95
UPF3BQ9BZI7 RNU6-1151P-201ENST00000384684 107 ntBASIC2.84□□□□□ -1.95
UPF3BQ9BZI7 AL359511.1-201ENST00000402970 211 ntBASIC2.84□□□□□ -1.95
UPF3BQ9BZI7 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.84□□□□□ -1.95
UPF3BQ9BZI7 RNU2-17P-201ENST00000410290 190 ntBASIC2.84□□□□□ -1.95
UPF3BQ9BZI7 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.84□□□□□ -1.95
UPF3BQ9BZI7 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
UPF3BQ9BZI7 AC099677.1-201ENST00000420575 175 ntBASIC2.84□□□□□ -1.95
UPF3BQ9BZI7 RPS6P14-201ENST00000425165 719 ntBASIC2.84□□□□□ -1.95
UPF3BQ9BZI7 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.84□□□□□ -1.95
UPF3BQ9BZI7 AC129850.1-201ENST00000436203 508 ntBASIC2.84□□□□□ -1.95
UPF3BQ9BZI7 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.84□□□□□ -1.95
UPF3BQ9BZI7 ZNF736P6Y-201ENST00000447526 1213 ntBASIC2.84□□□□□ -1.95
UPF3BQ9BZI7 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
UPF3BQ9BZI7 RPS29P12-201ENST00000460178 152 ntBASIC2.84□□□□□ -1.95
UPF3BQ9BZI7 RPL23AP70-201ENST00000483361 460 ntBASIC2.84□□□□□ -1.95
UPF3BQ9BZI7 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.84□□□□□ -1.95
UPF3BQ9BZI7 RNU6-760P-201ENST00000516078 97 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms