Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.46□□□□□ -2.02
ABCA3Q99758 GZMAP1-201ENST00000503054 631 ntBASIC2.46□□□□□ -2.02
ABCA3Q99758 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.46□□□□□ -2.02
ABCA3Q99758 AC239860.2-201ENST00000525886 270 ntBASIC2.46□□□□□ -2.02
ABCA3Q99758 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.46□□□□□ -2.02
ABCA3Q99758 MIR4474-201ENST00000579189 78 ntBASIC2.46□□□□□ -2.02
ABCA3Q99758 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
ABCA3Q99758 AC103988.1-201ENST00000566382 2177 ntBASIC2.46□□□□□ -2.02
ABCA3Q99758 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
ABCA3Q99758 RNU6-1218P-201ENST00000458990 108 ntBASIC2.45□□□□□ -2.02
ABCA3Q99758 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.45□□□□□ -2.02
ABCA3Q99758 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.45□□□□□ -2.02
ABCA3Q99758 AL589935.2-201ENST00000616471 1231 ntBASIC2.45□□□□□ -2.02
ABCA3Q99758 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.45□□□□□ -2.02
ABCA3Q99758 MTND4P34-201ENST00000572715 1371 ntBASIC2.45□□□□□ -2.02
ABCA3Q99758 AP000567.1-201ENST00000406413 156 ntBASIC2.45□□□□□ -2.02
ABCA3Q99758 LSM5-205ENST00000409952 687 ntTSL 4 BASIC2.45□□□□□ -2.02
ABCA3Q99758 RNU2-20P-201ENST00000410425 191 ntBASIC2.45□□□□□ -2.02
ABCA3Q99758 TRGV6-201ENST00000417928 299 ntBASIC2.45□□□□□ -2.02
ABCA3Q99758 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.45□□□□□ -2.02
ABCA3Q99758 MTND2P16-201ENST00000419987 799 ntBASIC2.45□□□□□ -2.02
ABCA3Q99758 AC009238.1-201ENST00000442165 424 ntBASIC2.45□□□□□ -2.02
ABCA3Q99758 AC009237.6-201ENST00000446969 424 ntBASIC2.45□□□□□ -2.02
ABCA3Q99758 AL137159.1-201ENST00000452808 512 ntBASIC2.45□□□□□ -2.02
ABCA3Q99758 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.45□□□□□ -2.02
ABCA3Q99758 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC2.45□□□□□ -2.02
ABCA3Q99758 AC104564.1-201ENST00000493028 407 ntBASIC2.45□□□□□ -2.02
ABCA3Q99758 RN7SKP40-201ENST00000517211 242 ntBASIC2.45□□□□□ -2.02
ABCA3Q99758 CBX3P4-201ENST00000538909 354 ntBASIC2.45□□□□□ -2.02
ABCA3Q99758 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC2.45□□□□□ -2.02
ABCA3Q99758 AL356575.1-201ENST00000603008 283 ntBASIC2.45□□□□□ -2.02
ABCA3Q99758 AC121761.2-201ENST00000617300 689 ntBASIC2.45□□□□□ -2.02
ABCA3Q99758 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.45□□□□□ -2.02
ABCA3Q99758 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.45□□□□□ -2.02
ABCA3Q99758 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
ABCA3Q99758 AL353746.1-201ENST00000566293 6881 ntBASIC2.44□□□□□ -2.02
ABCA3Q99758 EIF1AXP1-201ENST00000419267 435 ntBASIC2.44□□□□□ -2.02
ABCA3Q99758 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
ABCA3Q99758 RPL34P26-201ENST00000445636 354 ntBASIC2.44□□□□□ -2.02
ABCA3Q99758 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.44□□□□□ -2.02
ABCA3Q99758 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.44□□□□□ -2.02
ABCA3Q99758 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.44□□□□□ -2.02
ABCA3Q99758 TTC39CP1-201ENST00000512513 755 ntBASIC2.44□□□□□ -2.02
ABCA3Q99758 AC117532.1-201ENST00000514638 323 ntBASIC2.44□□□□□ -2.02
ABCA3Q99758 RNA5SP402-201ENST00000517148 110 ntBASIC2.44□□□□□ -2.02
ABCA3Q99758 COX6CP5-201ENST00000527162 228 ntBASIC2.44□□□□□ -2.02
ABCA3Q99758 PTP4A1P6-201ENST00000531034 478 ntBASIC2.44□□□□□ -2.02
ABCA3Q99758 AL163153.1-201ENST00000554223 283 ntBASIC2.44□□□□□ -2.02
ABCA3Q99758 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.44□□□□□ -2.02
ABCA3Q99758 AL354943.1-201ENST00000572103 781 ntBASIC2.44□□□□□ -2.02
ABCA3Q99758 AC009314.1-201ENST00000603871 304 ntBASIC2.44□□□□□ -2.02
ABCA3Q99758 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.44□□□□□ -2.02
ABCA3Q99758 KPNA2P1-201ENST00000458289 1591 ntBASIC2.44□□□□□ -2.02
ABCA3Q99758 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.44□□□□□ -2.02
ABCA3Q99758 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.43□□□□□ -2.02
ABCA3Q99758 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.43□□□□□ -2.02
ABCA3Q99758 SNRPFP4-201ENST00000456366 242 ntBASIC2.43□□□□□ -2.02
ABCA3Q99758 GTF2IP9-201ENST00000502460 301 ntBASIC2.43□□□□□ -2.02
ABCA3Q99758 HMGN1P28-201ENST00000521340 364 ntBASIC2.43□□□□□ -2.02
ABCA3Q99758 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.43□□□□□ -2.02
ABCA3Q99758 AC090751.1-201ENST00000566966 267 ntBASIC2.43□□□□□ -2.02
ABCA3Q99758 MYL12BP1-201ENST00000569826 507 ntBASIC2.43□□□□□ -2.02
ABCA3Q99758 AP000787.2-201ENST00000604432 568 ntBASIC2.43□□□□□ -2.02
ABCA3Q99758 BX248123.2-201ENST00000606318 124 ntBASIC2.43□□□□□ -2.02
ABCA3Q99758 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC2.43□□□□□ -2.02
ABCA3Q99758 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC2.43□□□□□ -2.02
ABCA3Q99758 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.43□□□□□ -2.02
ABCA3Q99758 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.43□□□□□ -2.02
ABCA3Q99758 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC2.43□□□□□ -2.02
ABCA3Q99758 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.43□□□□□ -2.02
ABCA3Q99758 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
ABCA3Q99758 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
ABCA3Q99758 SET-203ENST00000372688 801 ntTSL 2 BASIC2.42□□□□□ -2.02
ABCA3Q99758 BTBD10P2-201ENST00000404779 676 ntBASIC2.42□□□□□ -2.02
ABCA3Q99758 AC004965.1-201ENST00000413033 213 ntBASIC2.42□□□□□ -2.02
ABCA3Q99758 RPL31P2-201ENST00000413849 377 ntBASIC2.42□□□□□ -2.02
ABCA3Q99758 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC2.42□□□□□ -2.02
ABCA3Q99758 AC023128.2-201ENST00000420880 1223 ntBASIC2.42□□□□□ -2.02
ABCA3Q99758 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.42□□□□□ -2.02
ABCA3Q99758 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.42□□□□□ -2.02
ABCA3Q99758 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.42□□□□□ -2.02
ABCA3Q99758 RNA5SP108-201ENST00000605921 117 ntBASIC2.42□□□□□ -2.02
ABCA3Q99758 CNOT6LP1-201ENST00000559681 1462 ntBASIC2.42□□□□□ -2.02
ABCA3Q99758 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
ABCA3Q99758 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
ABCA3Q99758 UBE2L2-201ENST00000254302 429 ntBASIC2.42□□□□□ -2.02
ABCA3Q99758 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.42□□□□□ -2.02
ABCA3Q99758 RNU1-101P-201ENST00000391171 127 ntBASIC2.42□□□□□ -2.02
ABCA3Q99758 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.42□□□□□ -2.02
ABCA3Q99758 AC104435.1-201ENST00000483483 166 ntBASIC2.42□□□□□ -2.02
ABCA3Q99758 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC2.42□□□□□ -2.02
ABCA3Q99758 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
ABCA3Q99758 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.42□□□□□ -2.02
ABCA3Q99758 APOOP1-201ENST00000604695 592 ntBASIC2.42□□□□□ -2.02
ABCA3Q99758 VIS1.1-201ENST00000610517 203 ntBASIC2.42□□□□□ -2.02
ABCA3Q99758 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.42□□□□□ -2.02
ABCA3Q99758 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.41□□□□□ -2.02
ABCA3Q99758 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
ABCA3Q99758 RNA5SP160-201ENST00000364866 120 ntBASIC2.41□□□□□ -2.02
ABCA3Q99758 RNU1-57P-201ENST00000384491 166 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms