Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC1.51□□□□□ -2.17
COL12A1Q99715 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
COL12A1Q99715 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC1.5□□□□□ -2.17
COL12A1Q99715 OR4G11P-202ENST00000642116 1414 ntBASIC1.5□□□□□ -2.17
COL12A1Q99715 ZNF720P1-201ENST00000562403 1939 ntBASIC1.5□□□□□ -2.17
COL12A1Q99715 AL136133.1-201ENST00000413694 376 ntBASIC1.5□□□□□ -2.17
COL12A1Q99715 AL138785.1-201ENST00000425821 331 ntBASIC1.5□□□□□ -2.17
COL12A1Q99715 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC1.5□□□□□ -2.17
COL12A1Q99715 AC114801.2-201ENST00000503825 781 ntBASIC1.5□□□□□ -2.17
COL12A1Q99715 NIFKP8-201ENST00000560500 874 ntBASIC1.5□□□□□ -2.17
COL12A1Q99715 AC096720.1-201ENST00000604441 183 ntBASIC1.5□□□□□ -2.17
COL12A1Q99715 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.5□□□□□ -2.17
COL12A1Q99715 ZNF355P-201ENST00000427301 3216 ntBASIC1.5□□□□□ -2.17
COL12A1Q99715 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC1.5□□□□□ -2.17
COL12A1Q99715 RNU1-42P-201ENST00000364033 160 ntBASIC1.5□□□□□ -2.17
COL12A1Q99715 RNU6-1105P-201ENST00000384774 107 ntBASIC1.5□□□□□ -2.17
COL12A1Q99715 TOMM22P1-201ENST00000418578 312 ntBASIC1.5□□□□□ -2.17
COL12A1Q99715 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC1.5□□□□□ -2.17
COL12A1Q99715 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.5□□□□□ -2.17
COL12A1Q99715 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC1.5□□□□□ -2.17
COL12A1Q99715 AC007536.1-201ENST00000533382 349 ntBASIC1.5□□□□□ -2.17
COL12A1Q99715 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
COL12A1Q99715 AC066616.2-201ENST00000559334 1481 ntBASIC1.49□□□□□ -2.17
COL12A1Q99715 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
COL12A1Q99715 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
COL12A1Q99715 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
COL12A1Q99715 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.49□□□□□ -2.17
COL12A1Q99715 AC109471.1-201ENST00000511631 612 ntBASIC1.49□□□□□ -2.17
COL12A1Q99715 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.49□□□□□ -2.17
COL12A1Q99715 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
COL12A1Q99715 AC008126.1-201ENST00000549019 480 ntBASIC1.49□□□□□ -2.17
COL12A1Q99715 CBX3P5-201ENST00000552017 521 ntBASIC1.49□□□□□ -2.17
COL12A1Q99715 AC109446.2-201ENST00000567872 497 ntBASIC1.49□□□□□ -2.17
COL12A1Q99715 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC1.49□□□□□ -2.17
COL12A1Q99715 BX649567.1-201ENST00000642071 1134 ntBASIC1.49□□□□□ -2.17
COL12A1Q99715 AC234781.2-201ENST00000426370 994 ntBASIC1.49□□□□□ -2.17
COL12A1Q99715 AMD1P1-201ENST00000457220 922 ntBASIC1.49□□□□□ -2.17
COL12A1Q99715 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC1.49□□□□□ -2.17
COL12A1Q99715 AC079804.2-201ENST00000490376 200 ntBASIC1.49□□□□□ -2.17
COL12A1Q99715 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC1.49□□□□□ -2.17
COL12A1Q99715 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC1.49□□□□□ -2.17
COL12A1Q99715 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC1.49□□□□□ -2.17
COL12A1Q99715 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
COL12A1Q99715 7SK.7-201ENST00000603504 247 ntBASIC1.49□□□□□ -2.17
COL12A1Q99715 AC009314.1-201ENST00000603871 304 ntBASIC1.49□□□□□ -2.17
COL12A1Q99715 AC080078.3-201ENST00000605407 463 ntBASIC1.49□□□□□ -2.17
COL12A1Q99715 AC016590.3-201ENST00000611171 753 ntBASIC1.49□□□□□ -2.17
COL12A1Q99715 U73479.1-201ENST00000618062 168 ntBASIC1.49□□□□□ -2.17
COL12A1Q99715 AL512430.2-201ENST00000406786 339 ntBASIC1.48□□□□□ -2.17
COL12A1Q99715 U3.37-201ENST00000408528 213 ntBASIC1.48□□□□□ -2.17
COL12A1Q99715 MTND1P18-201ENST00000448191 573 ntBASIC1.48□□□□□ -2.17
COL12A1Q99715 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.48□□□□□ -2.17
COL12A1Q99715 AC092989.1-201ENST00000481235 277 ntBASIC1.48□□□□□ -2.17
COL12A1Q99715 AC034222.1-201ENST00000494052 532 ntBASIC1.48□□□□□ -2.17
COL12A1Q99715 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.48□□□□□ -2.17
COL12A1Q99715 AC073348.1-201ENST00000623002 331 ntBASIC1.48□□□□□ -2.17
COL12A1Q99715 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.48□□□□□ -2.17
COL12A1Q99715 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC1.48□□□□□ -2.17
COL12A1Q99715 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
COL12A1Q99715 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.48□□□□□ -2.17
COL12A1Q99715 RPS3AP44-201ENST00000425466 790 ntBASIC1.48□□□□□ -2.17
COL12A1Q99715 AC008571.1-201ENST00000467232 300 ntBASIC1.48□□□□□ -2.17
COL12A1Q99715 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.48□□□□□ -2.17
COL12A1Q99715 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.48□□□□□ -2.17
COL12A1Q99715 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.48□□□□□ -2.17
COL12A1Q99715 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
COL12A1Q99715 RNA5SP257-201ENST00000363023 116 ntBASIC1.48□□□□□ -2.17
COL12A1Q99715 RNU1-22P-201ENST00000363334 158 ntBASIC1.48□□□□□ -2.17
COL12A1Q99715 RNA5SP139-201ENST00000364340 117 ntBASIC1.48□□□□□ -2.17
COL12A1Q99715 AC025033.1-201ENST00000463883 194 ntBASIC1.48□□□□□ -2.17
COL12A1Q99715 RN7SL274P-201ENST00000492268 272 ntBASIC1.48□□□□□ -2.17
COL12A1Q99715 GTF2IP9-201ENST00000502460 301 ntBASIC1.48□□□□□ -2.17
COL12A1Q99715 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC1.48□□□□□ -2.17
COL12A1Q99715 VN1R74P-201ENST00000613259 503 ntBASIC1.48□□□□□ -2.17
COL12A1Q99715 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.48□□□□□ -2.17
COL12A1Q99715 RPL23AP20-201ENST00000447965 421 ntBASIC1.47□□□□□ -2.17
COL12A1Q99715 AC087854.1-201ENST00000519706 414 ntBASIC1.47□□□□□ -2.17
COL12A1Q99715 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.47□□□□□ -2.17
COL12A1Q99715 RMST_6.1-201ENST00000611980 203 ntBASIC1.47□□□□□ -2.17
COL12A1Q99715 AL157834.3-201ENST00000615543 103 ntBASIC1.47□□□□□ -2.17
COL12A1Q99715 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
COL12A1Q99715 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC1.47□□□□□ -2.17
COL12A1Q99715 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
COL12A1Q99715 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
COL12A1Q99715 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
COL12A1Q99715 MIR520E-201ENST00000384867 87 ntBASIC1.47□□□□□ -2.17
COL12A1Q99715 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC1.47□□□□□ -2.17
COL12A1Q99715 AL365400.1-201ENST00000431854 640 ntBASIC1.47□□□□□ -2.17
COL12A1Q99715 RPS27P5-201ENST00000444247 244 ntBASIC1.47□□□□□ -2.17
COL12A1Q99715 COX6CP12-201ENST00000446748 202 ntBASIC1.47□□□□□ -2.17
COL12A1Q99715 AC090255.1-201ENST00000495779 349 ntBASIC1.47□□□□□ -2.17
COL12A1Q99715 RNA5SP402-201ENST00000517148 110 ntBASIC1.47□□□□□ -2.17
COL12A1Q99715 AC104581.2-201ENST00000572227 430 ntBASIC1.47□□□□□ -2.17
COL12A1Q99715 AC008687.2-201ENST00000597865 520 ntBASIC1.47□□□□□ -2.17
COL12A1Q99715 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
COL12A1Q99715 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
COL12A1Q99715 ZNF876P-202ENST00000398732 1485 ntBASIC1.47□□□□□ -2.17
COL12A1Q99715 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.46□□□□□ -2.17
COL12A1Q99715 DYNLT3P1-201ENST00000378574 347 ntBASIC1.46□□□□□ -2.18
COL12A1Q99715 RAD23BP2-201ENST00000416003 1207 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms