Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 AC125611.2-201ENST00000551907 647 ntBASIC2.54□□□□□ -2
VAT1Q99536 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.54□□□□□ -2
VAT1Q99536 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC2.54□□□□□ -2
VAT1Q99536 MTCO1P40-201ENST00000574371 625 ntBASIC2.54□□□□□ -2
VAT1Q99536 MIR4319-201ENST00000577285 85 ntBASIC2.54□□□□□ -2
VAT1Q99536 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.54□□□□□ -2
VAT1Q99536 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.54□□□□□ -2
VAT1Q99536 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.54□□□□□ -2
VAT1Q99536 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.54□□□□□ -2
VAT1Q99536 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
VAT1Q99536 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
VAT1Q99536 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
VAT1Q99536 AC091564.4-201ENST00000533934 2194 ntBASIC2.53□□□□□ -2
VAT1Q99536 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
VAT1Q99536 AL513185.3-201ENST00000433335 1300 ntBASIC2.53□□□□□ -2
VAT1Q99536 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC2.53□□□□□ -2
VAT1Q99536 VTRNA1-1-201ENST00000363120 99 ntBASIC2.53□□□□□ -2
VAT1Q99536 RNU6-251P-201ENST00000363235 104 ntBASIC2.53□□□□□ -2
VAT1Q99536 OR1L1-202ENST00000373686 1083 ntBASIC2.53□□□□□ -2
VAT1Q99536 SNORA51.6-201ENST00000384151 125 ntBASIC2.53□□□□□ -2
VAT1Q99536 SNORD116-23-201ENST00000384645 92 ntBASIC2.53□□□□□ -2
VAT1Q99536 SNORA41-201ENST00000384675 132 ntBASIC2.53□□□□□ -2
VAT1Q99536 AL139098.1-201ENST00000407291 389 ntBASIC2.53□□□□□ -2
VAT1Q99536 MTND3P20-201ENST00000407663 186 ntBASIC2.53□□□□□ -2
VAT1Q99536 HMGN2P35-201ENST00000412164 270 ntBASIC2.53□□□□□ -2
VAT1Q99536 FCF1P2-201ENST00000415284 583 ntBASIC2.53□□□□□ -2
VAT1Q99536 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.53□□□□□ -2
VAT1Q99536 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.53□□□□□ -2
VAT1Q99536 AC104389.3-201ENST00000445629 235 ntBASIC2.53□□□□□ -2
VAT1Q99536 Z96811.1-201ENST00000445880 108 ntBASIC2.53□□□□□ -2
VAT1Q99536 AC084024.2-201ENST00000503480 791 ntBASIC2.53□□□□□ -2
VAT1Q99536 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.53□□□□□ -2
VAT1Q99536 AC048346.1-201ENST00000510247 144 ntBASIC2.53□□□□□ -2
VAT1Q99536 AC128657.1-201ENST00000549459 145 ntBASIC2.53□□□□□ -2
VAT1Q99536 AC011611.5-201ENST00000552477 578 ntBASIC2.53□□□□□ -2
VAT1Q99536 AC090695.1-201ENST00000561269 1222 ntBASIC2.53□□□□□ -2
VAT1Q99536 AL138880.2-201ENST00000616214 239 ntBASIC2.53□□□□□ -2
VAT1Q99536 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.53□□□□□ -2
VAT1Q99536 MAPK10-266ENST00000641066 6555 ntBASIC2.53□□□□□ -2
VAT1Q99536 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.53□□□□□ -2
VAT1Q99536 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
VAT1Q99536 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
VAT1Q99536 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
VAT1Q99536 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
VAT1Q99536 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
VAT1Q99536 AL672167.1-206ENST00000356293 943 ntBASIC2.52□□□□□ -2.01
VAT1Q99536 RNU5D-1-201ENST00000363299 116 ntBASIC2.52□□□□□ -2.01
VAT1Q99536 SNORA25.6-201ENST00000364121 118 ntBASIC2.52□□□□□ -2.01
VAT1Q99536 SNORA1.3-201ENST00000384676 136 ntBASIC2.52□□□□□ -2.01
VAT1Q99536 MIR196B-201ENST00000384852 84 ntBASIC2.52□□□□□ -2.01
VAT1Q99536 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
VAT1Q99536 AL136372.1-201ENST00000403060 228 ntBASIC2.52□□□□□ -2.01
VAT1Q99536 AL024474.1-201ENST00000404655 591 ntBASIC2.52□□□□□ -2.01
VAT1Q99536 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.52□□□□□ -2.01
VAT1Q99536 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.52□□□□□ -2.01
VAT1Q99536 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.52□□□□□ -2.01
VAT1Q99536 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.52□□□□□ -2.01
VAT1Q99536 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC2.52□□□□□ -2.01
VAT1Q99536 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
VAT1Q99536 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC2.52□□□□□ -2.01
VAT1Q99536 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.52□□□□□ -2.01
VAT1Q99536 RPL7P55-201ENST00000450522 746 ntBASIC2.52□□□□□ -2.01
VAT1Q99536 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.52□□□□□ -2.01
VAT1Q99536 RNU7-140P-201ENST00000459546 60 ntBASIC2.52□□□□□ -2.01
VAT1Q99536 RPL23AP45-201ENST00000476406 468 ntBASIC2.52□□□□□ -2.01
VAT1Q99536 AC004924.1-201ENST00000480160 781 ntBASIC2.52□□□□□ -2.01
VAT1Q99536 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC2.52□□□□□ -2.01
VAT1Q99536 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.52□□□□□ -2.01
VAT1Q99536 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.52□□□□□ -2.01
VAT1Q99536 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.52□□□□□ -2.01
VAT1Q99536 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.52□□□□□ -2.01
VAT1Q99536 HMGB1P1-201ENST00000522557 636 ntBASIC2.52□□□□□ -2.01
VAT1Q99536 ARL2BPP5-201ENST00000523141 481 ntBASIC2.52□□□□□ -2.01
VAT1Q99536 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.52□□□□□ -2.01
VAT1Q99536 LINC00557-201ENST00000563184 1279 ntBASIC2.52□□□□□ -2.01
VAT1Q99536 RPL23AP84-201ENST00000571193 464 ntBASIC2.52□□□□□ -2.01
VAT1Q99536 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.52□□□□□ -2.01
VAT1Q99536 GLUD1P4-201ENST00000590914 418 ntBASIC2.52□□□□□ -2.01
VAT1Q99536 NUTF2P8-201ENST00000604593 363 ntBASIC2.52□□□□□ -2.01
VAT1Q99536 HSPE1P7-201ENST00000604681 321 ntBASIC2.52□□□□□ -2.01
VAT1Q99536 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.52□□□□□ -2.01
VAT1Q99536 AL590396.4-201ENST00000636779 956 ntBASIC2.52□□□□□ -2.01
VAT1Q99536 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.52□□□□□ -2.01
VAT1Q99536 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
VAT1Q99536 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
VAT1Q99536 MIR16-2-201ENST00000362117 81 ntBASIC2.51□□□□□ -2.01
VAT1Q99536 RNU6-582P-201ENST00000362989 107 ntBASIC2.51□□□□□ -2.01
VAT1Q99536 RNU6-1027P-201ENST00000383998 107 ntBASIC2.51□□□□□ -2.01
VAT1Q99536 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.51□□□□□ -2.01
VAT1Q99536 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC2.51□□□□□ -2.01
VAT1Q99536 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.51□□□□□ -2.01
VAT1Q99536 AL050341.1-201ENST00000447743 313 ntBASIC2.51□□□□□ -2.01
VAT1Q99536 AL109933.2-201ENST00000452651 260 ntBASIC2.51□□□□□ -2.01
VAT1Q99536 MTND2P30-201ENST00000456663 382 ntBASIC2.51□□□□□ -2.01
VAT1Q99536 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.51□□□□□ -2.01
VAT1Q99536 KC877373.1-201ENST00000479066 408 ntBASIC2.51□□□□□ -2.01
VAT1Q99536 RN7SL432P-201ENST00000484057 298 ntBASIC2.51□□□□□ -2.01
VAT1Q99536 RPS27P27-201ENST00000498779 255 ntBASIC2.51□□□□□ -2.01
VAT1Q99536 RNA5SP320-201ENST00000516263 124 ntBASIC2.51□□□□□ -2.01
VAT1Q99536 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms