Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
NR1H4Q96RI1 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
NR1H4Q96RI1 SDAD1P2-201ENST00000441308 2028 ntBASIC3.65□□□□□ -1.82
NR1H4Q96RI1 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
NR1H4Q96RI1 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
NR1H4Q96RI1 MIR331-201ENST00000362302 94 ntBASIC3.65□□□□□ -1.83
NR1H4Q96RI1 RNU4-40P-201ENST00000364351 143 ntBASIC3.65□□□□□ -1.83
NR1H4Q96RI1 SNORA23-201ENST00000365128 182 ntBASIC3.65□□□□□ -1.83
NR1H4Q96RI1 RNU6-805P-201ENST00000365643 106 ntBASIC3.65□□□□□ -1.83
NR1H4Q96RI1 RN7SKP159-201ENST00000410657 292 ntBASIC3.65□□□□□ -1.83
NR1H4Q96RI1 HMGN1P14-201ENST00000412459 517 ntBASIC3.65□□□□□ -1.83
NR1H4Q96RI1 TMSB10P2-201ENST00000416049 131 ntBASIC3.65□□□□□ -1.83
NR1H4Q96RI1 USP9YP13-201ENST00000417797 480 ntBASIC3.65□□□□□ -1.83
NR1H4Q96RI1 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.65□□□□□ -1.83
NR1H4Q96RI1 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.65□□□□□ -1.83
NR1H4Q96RI1 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.65□□□□□ -1.83
NR1H4Q96RI1 USP9YP9-201ENST00000429406 715 ntBASIC3.65□□□□□ -1.83
NR1H4Q96RI1 AL358472.1-201ENST00000431295 329 ntBASIC3.65□□□□□ -1.83
NR1H4Q96RI1 AC011998.1-201ENST00000433403 117 ntBASIC3.65□□□□□ -1.83
NR1H4Q96RI1 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.65□□□□□ -1.83
NR1H4Q96RI1 MTCO2P16-201ENST00000436962 677 ntBASIC3.65□□□□□ -1.83
NR1H4Q96RI1 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.65□□□□□ -1.83
NR1H4Q96RI1 RPL23AP46-201ENST00000438548 490 ntBASIC3.65□□□□□ -1.83
NR1H4Q96RI1 AC092641.1-201ENST00000440229 772 ntBASIC3.65□□□□□ -1.83
NR1H4Q96RI1 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.65□□□□□ -1.83
NR1H4Q96RI1 AL138878.2-201ENST00000440581 1241 ntBASIC3.65□□□□□ -1.83
NR1H4Q96RI1 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.65□□□□□ -1.83
NR1H4Q96RI1 MTND2P24-201ENST00000453434 806 ntBASIC3.65□□□□□ -1.83
NR1H4Q96RI1 MTND2P28-201ENST00000457540 1044 ntBASIC3.65□□□□□ -1.83
NR1H4Q96RI1 RNU6-956P-201ENST00000458868 103 ntBASIC3.65□□□□□ -1.83
NR1H4Q96RI1 RPL35AP28-201ENST00000459730 331 ntBASIC3.65□□□□□ -1.83
NR1H4Q96RI1 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC3.65□□□□□ -1.83
NR1H4Q96RI1 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
NR1H4Q96RI1 RPS15AP36-201ENST00000492022 382 ntBASIC3.65□□□□□ -1.83
NR1H4Q96RI1 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.65□□□□□ -1.83
NR1H4Q96RI1 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.65□□□□□ -1.83
NR1H4Q96RI1 AC110768.1-201ENST00000509222 400 ntBASIC3.65□□□□□ -1.83
NR1H4Q96RI1 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.65□□□□□ -1.83
NR1H4Q96RI1 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
NR1H4Q96RI1 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.65□□□□□ -1.83
NR1H4Q96RI1 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.65□□□□□ -1.83
NR1H4Q96RI1 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.65□□□□□ -1.83
NR1H4Q96RI1 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.65□□□□□ -1.83
NR1H4Q96RI1 CCNG2P1-201ENST00000549521 1000 ntBASIC3.65□□□□□ -1.83
NR1H4Q96RI1 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.65□□□□□ -1.83
NR1H4Q96RI1 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.65□□□□□ -1.83
NR1H4Q96RI1 AL157394.1-201ENST00000562983 1224 ntBASIC3.65□□□□□ -1.83
NR1H4Q96RI1 AC084783.1-201ENST00000565846 910 ntBASIC3.65□□□□□ -1.83
NR1H4Q96RI1 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC3.65□□□□□ -1.83
NR1H4Q96RI1 RN7SL690P-201ENST00000582087 240 ntBASIC3.65□□□□□ -1.83
NR1H4Q96RI1 AF038458.1-201ENST00000588406 262 ntBASIC3.65□□□□□ -1.83
NR1H4Q96RI1 AC006116.10-201ENST00000591836 581 ntBASIC3.65□□□□□ -1.83
NR1H4Q96RI1 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.65□□□□□ -1.83
NR1H4Q96RI1 AC073544.2-201ENST00000601155 540 ntBASIC3.65□□□□□ -1.83
NR1H4Q96RI1 KC877982.1-201ENST00000602313 470 ntBASIC3.65□□□□□ -1.83
NR1H4Q96RI1 RNU6-87P-201ENST00000607561 108 ntBASIC3.65□□□□□ -1.83
NR1H4Q96RI1 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.65□□□□□ -1.83
NR1H4Q96RI1 AC008250.2-201ENST00000615261 205 ntBASIC3.65□□□□□ -1.83
NR1H4Q96RI1 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.65□□□□□ -1.83
NR1H4Q96RI1 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.65□□□□□ -1.83
NR1H4Q96RI1 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
NR1H4Q96RI1 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
NR1H4Q96RI1 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
NR1H4Q96RI1 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
NR1H4Q96RI1 SRP72P2-201ENST00000344851 1979 ntBASIC3.65□□□□□ -1.83
NR1H4Q96RI1 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
NR1H4Q96RI1 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
NR1H4Q96RI1 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NR1H4Q96RI1 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NR1H4Q96RI1 OR4K15-201ENST00000305051 1216 ntBASIC3.64□□□□□ -1.83
NR1H4Q96RI1 RNU1-75P-201ENST00000347264 129 ntBASIC3.64□□□□□ -1.83
NR1H4Q96RI1 AL583835.1-201ENST00000399570 407 ntBASIC3.64□□□□□ -1.83
NR1H4Q96RI1 AL136116.1-201ENST00000403591 381 ntBASIC3.64□□□□□ -1.83
NR1H4Q96RI1 TXNP7-201ENST00000406296 293 ntBASIC3.64□□□□□ -1.83
NR1H4Q96RI1 RNA5SP293-201ENST00000410527 113 ntBASIC3.64□□□□□ -1.83
NR1H4Q96RI1 RN7SKP182-201ENST00000410772 298 ntBASIC3.64□□□□□ -1.83
NR1H4Q96RI1 RNU2-62P-201ENST00000410868 191 ntBASIC3.64□□□□□ -1.83
NR1H4Q96RI1 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.64□□□□□ -1.83
NR1H4Q96RI1 SPA17P1-201ENST00000416656 452 ntBASIC3.64□□□□□ -1.83
NR1H4Q96RI1 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.64□□□□□ -1.83
NR1H4Q96RI1 AC008850.1-201ENST00000427546 362 ntBASIC3.64□□□□□ -1.83
NR1H4Q96RI1 MTND1P28-201ENST00000435623 950 ntBASIC3.64□□□□□ -1.83
NR1H4Q96RI1 AL772161.1-201ENST00000439130 476 ntBASIC3.64□□□□□ -1.83
NR1H4Q96RI1 ST13P20-201ENST00000447996 1065 ntBASIC3.64□□□□□ -1.83
NR1H4Q96RI1 AC073264.2-201ENST00000448886 166 ntBASIC3.64□□□□□ -1.83
NR1H4Q96RI1 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NR1H4Q96RI1 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.64□□□□□ -1.83
NR1H4Q96RI1 AL033528.1-201ENST00000453780 140 ntBASIC3.64□□□□□ -1.83
NR1H4Q96RI1 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.64□□□□□ -1.83
NR1H4Q96RI1 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.64□□□□□ -1.83
NR1H4Q96RI1 RN7SL442P-201ENST00000473804 320 ntBASIC3.64□□□□□ -1.83
NR1H4Q96RI1 HSPE1P6-201ENST00000479457 291 ntBASIC3.64□□□□□ -1.83
NR1H4Q96RI1 AC114967.1-201ENST00000504890 259 ntBASIC3.64□□□□□ -1.83
NR1H4Q96RI1 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.64□□□□□ -1.83
NR1H4Q96RI1 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.64□□□□□ -1.83
NR1H4Q96RI1 RN7SKP13-201ENST00000515933 244 ntBASIC3.64□□□□□ -1.83
NR1H4Q96RI1 SNORA31.22-201ENST00000517204 135 ntBASIC3.64□□□□□ -1.83
NR1H4Q96RI1 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.64□□□□□ -1.83
NR1H4Q96RI1 DEFB108A-201ENST00000530110 222 ntBASIC3.64□□□□□ -1.83
NR1H4Q96RI1 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 140.3 ms