Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 RPL23AP39-201ENST00000415533 405 ntBASIC1.48□□□□□ -2.17
CSMD1Q96PZ7 AC098934.3-201ENST00000430450 190 ntBASIC1.48□□□□□ -2.17
CSMD1Q96PZ7 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.48□□□□□ -2.17
CSMD1Q96PZ7 RPL31P41-201ENST00000477967 372 ntBASIC1.48□□□□□ -2.17
CSMD1Q96PZ7 COX6CP5-201ENST00000527162 228 ntBASIC1.48□□□□□ -2.17
CSMD1Q96PZ7 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.48□□□□□ -2.17
CSMD1Q96PZ7 AC245036.5-201ENST00000596330 847 ntBASIC1.48□□□□□ -2.17
CSMD1Q96PZ7 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC1.48□□□□□ -2.17
CSMD1Q96PZ7 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC1.48□□□□□ -2.17
CSMD1Q96PZ7 OR4G1P-203ENST00000641984 1631 ntBASIC1.48□□□□□ -2.17
CSMD1Q96PZ7 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
CSMD1Q96PZ7 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
CSMD1Q96PZ7 TAS2R15P-201ENST00000390674 928 ntBASIC1.48□□□□□ -2.17
CSMD1Q96PZ7 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.48□□□□□ -2.17
CSMD1Q96PZ7 AC107393.1-201ENST00000512403 346 ntBASIC1.48□□□□□ -2.17
CSMD1Q96PZ7 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC1.48□□□□□ -2.17
CSMD1Q96PZ7 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.48□□□□□ -2.17
CSMD1Q96PZ7 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.48□□□□□ -2.17
CSMD1Q96PZ7 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.48□□□□□ -2.17
CSMD1Q96PZ7 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC1.48□□□□□ -2.17
CSMD1Q96PZ7 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
CSMD1Q96PZ7 RNU1-93P-201ENST00000364704 169 ntBASIC1.48□□□□□ -2.17
CSMD1Q96PZ7 RNA5SP160-201ENST00000364866 120 ntBASIC1.48□□□□□ -2.17
CSMD1Q96PZ7 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.48□□□□□ -2.17
CSMD1Q96PZ7 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.48□□□□□ -2.17
CSMD1Q96PZ7 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC1.48□□□□□ -2.17
CSMD1Q96PZ7 FAM92A1P1-201ENST00000528023 890 ntBASIC1.48□□□□□ -2.17
CSMD1Q96PZ7 GLYCAM1-201ENST00000546596 285 ntBASIC1.48□□□□□ -2.17
CSMD1Q96PZ7 AL137100.2-201ENST00000555786 315 ntBASIC1.48□□□□□ -2.17
CSMD1Q96PZ7 SULT1C2P1-202ENST00000562418 459 ntBASIC1.48□□□□□ -2.17
CSMD1Q96PZ7 MIR1273G-201ENST00000577677 100 ntBASIC1.48□□□□□ -2.17
CSMD1Q96PZ7 RNU1-139P-201ENST00000391307 165 ntBASIC1.47□□□□□ -2.17
CSMD1Q96PZ7 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
CSMD1Q96PZ7 BNIP3P2-201ENST00000441221 577 ntBASIC1.47□□□□□ -2.17
CSMD1Q96PZ7 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC1.47□□□□□ -2.17
CSMD1Q96PZ7 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC1.47□□□□□ -2.17
CSMD1Q96PZ7 RPS29P1-201ENST00000465274 159 ntBASIC1.47□□□□□ -2.17
CSMD1Q96PZ7 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
CSMD1Q96PZ7 MTND5P7-201ENST00000413558 1798 ntBASIC1.47□□□□□ -2.17
CSMD1Q96PZ7 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC1.47□□□□□ -2.17
CSMD1Q96PZ7 RPL30P3-201ENST00000424262 333 ntBASIC1.47□□□□□ -2.17
CSMD1Q96PZ7 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.47□□□□□ -2.17
CSMD1Q96PZ7 IPMKP1-201ENST00000425988 855 ntBASIC1.47□□□□□ -2.17
CSMD1Q96PZ7 AC008571.1-201ENST00000467232 300 ntBASIC1.47□□□□□ -2.17
CSMD1Q96PZ7 RN7SL274P-201ENST00000492268 272 ntBASIC1.47□□□□□ -2.17
CSMD1Q96PZ7 CBX3P5-201ENST00000552017 521 ntBASIC1.47□□□□□ -2.17
CSMD1Q96PZ7 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.47□□□□□ -2.17
CSMD1Q96PZ7 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.47□□□□□ -2.17
CSMD1Q96PZ7 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC1.47□□□□□ -2.17
CSMD1Q96PZ7 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
CSMD1Q96PZ7 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
CSMD1Q96PZ7 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
CSMD1Q96PZ7 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC1.47□□□□□ -2.17
CSMD1Q96PZ7 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC1.47□□□□□ -2.17
CSMD1Q96PZ7 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC1.47□□□□□ -2.17
CSMD1Q96PZ7 MIR4506-201ENST00000584693 77 ntBASIC1.47□□□□□ -2.17
CSMD1Q96PZ7 ABI1P1-201ENST00000603375 1120 ntBASIC1.47□□□□□ -2.17
CSMD1Q96PZ7 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
CSMD1Q96PZ7 SNORD114-27-201ENST00000363766 70 ntBASIC1.46□□□□□ -2.18
CSMD1Q96PZ7 RNA5SP181-201ENST00000410246 98 ntBASIC1.46□□□□□ -2.18
CSMD1Q96PZ7 AC005534.2-201ENST00000431047 433 ntBASIC1.46□□□□□ -2.18
CSMD1Q96PZ7 RPL23AP20-201ENST00000447965 421 ntBASIC1.46□□□□□ -2.18
CSMD1Q96PZ7 AC098848.2-201ENST00000588023 330 ntBASIC1.46□□□□□ -2.18
CSMD1Q96PZ7 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
CSMD1Q96PZ7 AC034102.8-201ENST00000615146 484 ntBASIC1.46□□□□□ -2.18
CSMD1Q96PZ7 CDC27P3-201ENST00000635418 1910 ntBASIC1.46□□□□□ -2.18
CSMD1Q96PZ7 Y_RNA.471-201ENST00000384312 102 ntBASIC1.46□□□□□ -2.18
CSMD1Q96PZ7 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.46□□□□□ -2.18
CSMD1Q96PZ7 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.46□□□□□ -2.18
CSMD1Q96PZ7 RNU2-58P-201ENST00000516403 183 ntBASIC1.46□□□□□ -2.18
CSMD1Q96PZ7 AC087854.1-201ENST00000519706 414 ntBASIC1.46□□□□□ -2.18
CSMD1Q96PZ7 RPS3AP23-202ENST00000574601 686 ntBASIC1.46□□□□□ -2.18
CSMD1Q96PZ7 AC073348.1-201ENST00000623002 331 ntBASIC1.46□□□□□ -2.18
CSMD1Q96PZ7 NUP58P1-201ENST00000502546 1738 ntBASIC1.46□□□□□ -2.18
CSMD1Q96PZ7 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
CSMD1Q96PZ7 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC1.46□□□□□ -2.18
CSMD1Q96PZ7 RNU6-249P-201ENST00000363016 102 ntBASIC1.46□□□□□ -2.18
CSMD1Q96PZ7 RNU1-42P-201ENST00000364033 160 ntBASIC1.46□□□□□ -2.18
CSMD1Q96PZ7 TOMM22P1-201ENST00000418578 312 ntBASIC1.46□□□□□ -2.18
CSMD1Q96PZ7 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.46□□□□□ -2.18
CSMD1Q96PZ7 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
CSMD1Q96PZ7 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC1.46□□□□□ -2.18
CSMD1Q96PZ7 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC1.46□□□□□ -2.18
CSMD1Q96PZ7 AC008568.2-201ENST00000623862 2313 ntBASIC1.46□□□□□ -2.18
CSMD1Q96PZ7 AC022513.1-201ENST00000624512 117 ntBASIC1.46□□□□□ -2.18
CSMD1Q96PZ7 SNORA68.2-201ENST00000391263 128 ntBASIC1.45□□□□□ -2.18
CSMD1Q96PZ7 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC1.45□□□□□ -2.18
CSMD1Q96PZ7 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC1.45□□□□□ -2.18
CSMD1Q96PZ7 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.45□□□□□ -2.18
CSMD1Q96PZ7 ZNF355P-201ENST00000427301 3216 ntBASIC1.45□□□□□ -2.18
CSMD1Q96PZ7 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
CSMD1Q96PZ7 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
CSMD1Q96PZ7 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.45□□□□□ -2.18
CSMD1Q96PZ7 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
CSMD1Q96PZ7 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.45□□□□□ -2.18
CSMD1Q96PZ7 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC1.45□□□□□ -2.18
CSMD1Q96PZ7 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.45□□□□□ -2.18
CSMD1Q96PZ7 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC1.45□□□□□ -2.18
CSMD1Q96PZ7 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
CSMD1Q96PZ7 MIR6788-201ENST00000618842 66 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms