Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 AC005008.1-201ENST00000456151 612 ntBASIC6.18□□□□□ -1.42
CCDC85AQ96PX6 RN7SL354P-201ENST00000469282 294 ntBASIC6.18□□□□□ -1.42
CCDC85AQ96PX6 RPS27AP1-201ENST00000475545 471 ntBASIC6.18□□□□□ -1.42
CCDC85AQ96PX6 TRBV1-201ENST00000476502 284 ntBASIC6.18□□□□□ -1.42
CCDC85AQ96PX6 AC092451.1-201ENST00000480211 153 ntBASIC6.18□□□□□ -1.42
CCDC85AQ96PX6 RPL23AP55-201ENST00000498163 452 ntBASIC6.18□□□□□ -1.42
CCDC85AQ96PX6 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC6.18□□□□□ -1.42
CCDC85AQ96PX6 AC116655.1-201ENST00000508324 901 ntBASIC6.18□□□□□ -1.42
CCDC85AQ96PX6 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC85AQ96PX6 HMGN1P28-201ENST00000521340 364 ntBASIC6.18□□□□□ -1.42
CCDC85AQ96PX6 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC6.18□□□□□ -1.42
CCDC85AQ96PX6 GNAI2P1-201ENST00000541815 315 ntBASIC6.18□□□□□ -1.42
CCDC85AQ96PX6 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC6.18□□□□□ -1.42
CCDC85AQ96PX6 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC6.18□□□□□ -1.42
CCDC85AQ96PX6 AC091042.1-201ENST00000579213 173 ntBASIC6.18□□□□□ -1.42
CCDC85AQ96PX6 MIR378J-201ENST00000611988 109 ntBASIC6.18□□□□□ -1.42
CCDC85AQ96PX6 MIR6128-201ENST00000615528 109 ntBASIC6.18□□□□□ -1.42
CCDC85AQ96PX6 AC092608.2-201ENST00000624427 218 ntBASIC6.18□□□□□ -1.42
CCDC85AQ96PX6 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
CCDC85AQ96PX6 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC85AQ96PX6 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC85AQ96PX6 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC6.18□□□□□ -1.42
CCDC85AQ96PX6 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC85AQ96PX6 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC85AQ96PX6 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC85AQ96PX6 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC85AQ96PX6 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC85AQ96PX6 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC85AQ96PX6 AP000756.2-201ENST00000624168 2567 ntBASIC6.17□□□□□ -1.42
CCDC85AQ96PX6 NRK-204ENST00000540278 1687 ntTSL 2 BASIC6.17□□□□□ -1.42
CCDC85AQ96PX6 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC6.17□□□□□ -1.42
CCDC85AQ96PX6 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC85AQ96PX6 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC85AQ96PX6 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC85AQ96PX6 RNU6-188P-201ENST00000364207 107 ntBASIC6.17□□□□□ -1.42
CCDC85AQ96PX6 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC85AQ96PX6 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC85AQ96PX6 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC85AQ96PX6 U3.32-201ENST00000408116 212 ntBASIC6.17□□□□□ -1.42
CCDC85AQ96PX6 RPL30P2-201ENST00000414021 291 ntBASIC6.17□□□□□ -1.42
CCDC85AQ96PX6 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC85AQ96PX6 AC127537.2-201ENST00000439258 465 ntBASIC6.17□□□□□ -1.42
CCDC85AQ96PX6 AC005094.1-201ENST00000440420 368 ntBASIC6.17□□□□□ -1.42
CCDC85AQ96PX6 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC6.17□□□□□ -1.42
CCDC85AQ96PX6 RPS17P13-201ENST00000448974 407 ntBASIC6.17□□□□□ -1.42
CCDC85AQ96PX6 RPS15AP27-201ENST00000449183 343 ntBASIC6.17□□□□□ -1.42
CCDC85AQ96PX6 PPIAP3-201ENST00000450588 505 ntBASIC6.17□□□□□ -1.42
CCDC85AQ96PX6 AL691482.1-201ENST00000453255 87 ntBASIC6.17□□□□□ -1.42
CCDC85AQ96PX6 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
CCDC85AQ96PX6 AC022034.3-201ENST00000471393 478 ntBASIC6.17□□□□□ -1.42
CCDC85AQ96PX6 HMGB1P21-201ENST00000502313 581 ntBASIC6.17□□□□□ -1.42
CCDC85AQ96PX6 FTH1P24-201ENST00000503502 462 ntBASIC6.17□□□□□ -1.42
CCDC85AQ96PX6 AC108078.2-201ENST00000510750 236 ntBASIC6.17□□□□□ -1.42
CCDC85AQ96PX6 Y_RNA.721-201ENST00000517207 102 ntBASIC6.17□□□□□ -1.42
CCDC85AQ96PX6 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC6.17□□□□□ -1.42
CCDC85AQ96PX6 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC6.17□□□□□ -1.42
CCDC85AQ96PX6 AC068790.4-201ENST00000602474 263 ntBASIC6.17□□□□□ -1.42
CCDC85AQ96PX6 AL354984.3-201ENST00000604803 325 ntBASIC6.17□□□□□ -1.42
CCDC85AQ96PX6 U2.17-201ENST00000611454 95 ntBASIC6.17□□□□□ -1.42
CCDC85AQ96PX6 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC85AQ96PX6 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC6.17□□□□□ -1.42
CCDC85AQ96PX6 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC85AQ96PX6 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC85AQ96PX6 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
CCDC85AQ96PX6 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
CCDC85AQ96PX6 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC6.16□□□□□ -1.42
CCDC85AQ96PX6 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC85AQ96PX6 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC85AQ96PX6 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC85AQ96PX6 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC85AQ96PX6 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC85AQ96PX6 AP005435.3-201ENST00000531260 3198 ntBASIC6.16□□□□□ -1.42
CCDC85AQ96PX6 RNU6-99P-201ENST00000364721 107 ntBASIC6.16□□□□□ -1.42
CCDC85AQ96PX6 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC85AQ96PX6 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
CCDC85AQ96PX6 RNU6-432P-201ENST00000384196 109 ntBASIC6.16□□□□□ -1.42
CCDC85AQ96PX6 RNU6-1127P-201ENST00000384580 107 ntBASIC6.16□□□□□ -1.42
CCDC85AQ96PX6 RNU6-516P-201ENST00000411381 104 ntBASIC6.16□□□□□ -1.42
CCDC85AQ96PX6 TBCAP2-201ENST00000416175 326 ntBASIC6.16□□□□□ -1.42
CCDC85AQ96PX6 BX276092.6-201ENST00000430476 250 ntBASIC6.16□□□□□ -1.42
CCDC85AQ96PX6 RPL21P112-201ENST00000434403 463 ntBASIC6.16□□□□□ -1.42
CCDC85AQ96PX6 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC6.16□□□□□ -1.42
CCDC85AQ96PX6 LAMTOR5P1-201ENST00000444290 270 ntBASIC6.16□□□□□ -1.42
CCDC85AQ96PX6 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC6.16□□□□□ -1.42
CCDC85AQ96PX6 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC85AQ96PX6 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC6.16□□□□□ -1.42
CCDC85AQ96PX6 HMGB3P21-201ENST00000452483 547 ntBASIC6.16□□□□□ -1.42
CCDC85AQ96PX6 BX276092.8-201ENST00000455722 250 ntBASIC6.16□□□□□ -1.42
CCDC85AQ96PX6 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC6.16□□□□□ -1.42
CCDC85AQ96PX6 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC6.16□□□□□ -1.42
CCDC85AQ96PX6 RNU1-54P-201ENST00000517181 120 ntBASIC6.16□□□□□ -1.42
CCDC85AQ96PX6 AC113195.1-201ENST00000579952 141 ntBASIC6.16□□□□□ -1.42
CCDC85AQ96PX6 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC6.16□□□□□ -1.42
CCDC85AQ96PX6 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC6.16□□□□□ -1.42
CCDC85AQ96PX6 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC6.16□□□□□ -1.42
CCDC85AQ96PX6 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC85AQ96PX6 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC85AQ96PX6 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC6.16□□□□□ -1.42
CCDC85AQ96PX6 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC85AQ96PX6 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms