Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.24□□□□□ -1.89
DUX3Q96PT4 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
DUX3Q96PT4 RNA5SP52-201ENST00000362448 134 ntBASIC3.24□□□□□ -1.89
DUX3Q96PT4 RNU5E-1-201ENST00000362477 120 ntBASIC3.24□□□□□ -1.89
DUX3Q96PT4 Y_RNA.402-201ENST00000383972 102 ntBASIC3.24□□□□□ -1.89
DUX3Q96PT4 SNORD115.1-201ENST00000391109 76 ntBASIC3.24□□□□□ -1.89
DUX3Q96PT4 AC069218.2-201ENST00000411665 344 ntBASIC3.24□□□□□ -1.89
DUX3Q96PT4 AC127391.1-201ENST00000411737 98 ntBASIC3.24□□□□□ -1.89
DUX3Q96PT4 HMGB3P20-201ENST00000417997 600 ntBASIC3.24□□□□□ -1.89
DUX3Q96PT4 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.24□□□□□ -1.89
DUX3Q96PT4 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.24□□□□□ -1.89
DUX3Q96PT4 AL159169.1-201ENST00000421119 127 ntBASIC3.24□□□□□ -1.89
DUX3Q96PT4 AL139413.1-201ENST00000421309 217 ntBASIC3.24□□□□□ -1.89
DUX3Q96PT4 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.24□□□□□ -1.89
DUX3Q96PT4 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.24□□□□□ -1.89
DUX3Q96PT4 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.24□□□□□ -1.89
DUX3Q96PT4 AL590233.1-201ENST00000430017 456 ntBASIC3.24□□□□□ -1.89
DUX3Q96PT4 AC002486.1-201ENST00000435098 391 ntBASIC3.24□□□□□ -1.89
DUX3Q96PT4 SKP1P1-201ENST00000438081 489 ntBASIC3.24□□□□□ -1.89
DUX3Q96PT4 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.24□□□□□ -1.89
DUX3Q96PT4 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.24□□□□□ -1.89
DUX3Q96PT4 MTND5P20-201ENST00000448677 143 ntBASIC3.24□□□□□ -1.89
DUX3Q96PT4 ARPC3P5-201ENST00000448802 534 ntBASIC3.24□□□□□ -1.89
DUX3Q96PT4 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC3.24□□□□□ -1.89
DUX3Q96PT4 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.24□□□□□ -1.89
DUX3Q96PT4 RPL23AP81-201ENST00000455252 467 ntBASIC3.24□□□□□ -1.89
DUX3Q96PT4 RPL7P15-201ENST00000461190 712 ntBASIC3.24□□□□□ -1.89
DUX3Q96PT4 RPL23AP62-201ENST00000463396 453 ntBASIC3.24□□□□□ -1.89
DUX3Q96PT4 PABPC1P3-201ENST00000469174 459 ntBASIC3.24□□□□□ -1.89
DUX3Q96PT4 RPL21P103-201ENST00000479921 488 ntBASIC3.24□□□□□ -1.89
DUX3Q96PT4 AC078817.1-201ENST00000492623 435 ntBASIC3.24□□□□□ -1.89
DUX3Q96PT4 FCF1P3-201ENST00000496394 590 ntBASIC3.24□□□□□ -1.89
DUX3Q96PT4 AC114967.1-201ENST00000504890 259 ntBASIC3.24□□□□□ -1.89
DUX3Q96PT4 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.24□□□□□ -1.89
DUX3Q96PT4 AC099522.1-202ENST00000514718 367 ntBASIC3.24□□□□□ -1.89
DUX3Q96PT4 RNU6-714P-201ENST00000516963 103 ntBASIC3.24□□□□□ -1.89
DUX3Q96PT4 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.24□□□□□ -1.89
DUX3Q96PT4 AC107934.1-201ENST00000522215 217 ntBASIC3.24□□□□□ -1.89
DUX3Q96PT4 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.24□□□□□ -1.89
DUX3Q96PT4 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.24□□□□□ -1.89
DUX3Q96PT4 OR8R1P-201ENST00000543943 764 ntBASIC3.24□□□□□ -1.89
DUX3Q96PT4 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.24□□□□□ -1.89
DUX3Q96PT4 LSM6P2-201ENST00000552208 177 ntBASIC3.24□□□□□ -1.89
DUX3Q96PT4 AL512360.1-201ENST00000555346 234 ntBASIC3.24□□□□□ -1.89
DUX3Q96PT4 HMGB1P33-201ENST00000563485 527 ntBASIC3.24□□□□□ -1.89
DUX3Q96PT4 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.24□□□□□ -1.89
DUX3Q96PT4 MTND6P33-201ENST00000571794 183 ntBASIC3.24□□□□□ -1.89
DUX3Q96PT4 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.24□□□□□ -1.89
DUX3Q96PT4 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.24□□□□□ -1.89
DUX3Q96PT4 AL035413.2-201ENST00000604801 525 ntBASIC3.24□□□□□ -1.89
DUX3Q96PT4 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.24□□□□□ -1.89
DUX3Q96PT4 MIR98-201ENST00000606724 119 ntBASIC3.24□□□□□ -1.89
DUX3Q96PT4 AL590282.1-201ENST00000610379 1136 ntBASIC3.24□□□□□ -1.89
DUX3Q96PT4 AC105429.2-201ENST00000610567 517 ntBASIC3.24□□□□□ -1.89
DUX3Q96PT4 FAM27D1-201ENST00000612308 341 ntBASIC3.24□□□□□ -1.89
DUX3Q96PT4 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.24□□□□□ -1.89
DUX3Q96PT4 AL133173.2-201ENST00000614270 90 ntBASIC3.24□□□□□ -1.89
DUX3Q96PT4 MIR6875-201ENST00000617506 72 ntBASIC3.24□□□□□ -1.89
DUX3Q96PT4 AC079597.1-201ENST00000624306 508 ntBASIC3.24□□□□□ -1.89
DUX3Q96PT4 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
DUX3Q96PT4 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.24□□□□□ -1.89
DUX3Q96PT4 AL354685.2-201ENST00000448218 1447 ntBASIC3.24□□□□□ -1.89
DUX3Q96PT4 AC130650.2-201ENST00000618736 2403 ntBASIC3.24□□□□□ -1.89
DUX3Q96PT4 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
DUX3Q96PT4 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
DUX3Q96PT4 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
DUX3Q96PT4 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.24□□□□□ -1.89
DUX3Q96PT4 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.23□□□□□ -1.89
DUX3Q96PT4 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
DUX3Q96PT4 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
DUX3Q96PT4 XPOTP1-201ENST00000443317 2398 ntBASIC3.23□□□□□ -1.89
DUX3Q96PT4 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.23□□□□□ -1.89
DUX3Q96PT4 RNU6-797P-201ENST00000363101 109 ntBASIC3.23□□□□□ -1.89
DUX3Q96PT4 RNU6-1243P-201ENST00000364028 107 ntBASIC3.23□□□□□ -1.89
DUX3Q96PT4 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
DUX3Q96PT4 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
DUX3Q96PT4 RNU6-328P-201ENST00000390887 106 ntBASIC3.23□□□□□ -1.89
DUX3Q96PT4 RNU2-37P-201ENST00000410695 177 ntBASIC3.23□□□□□ -1.89
DUX3Q96PT4 RNU4-6P-201ENST00000410804 122 ntBASIC3.23□□□□□ -1.89
DUX3Q96PT4 AL133384.1-201ENST00000412744 351 ntBASIC3.23□□□□□ -1.89
DUX3Q96PT4 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.23□□□□□ -1.89
DUX3Q96PT4 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.23□□□□□ -1.89
DUX3Q96PT4 AC108032.1-201ENST00000416706 207 ntBASIC3.23□□□□□ -1.89
DUX3Q96PT4 AL356095.1-201ENST00000417217 199 ntBASIC3.23□□□□□ -1.89
DUX3Q96PT4 AL161631.1-201ENST00000417933 486 ntBASIC3.23□□□□□ -1.89
DUX3Q96PT4 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.23□□□□□ -1.89
DUX3Q96PT4 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.23□□□□□ -1.89
DUX3Q96PT4 RPL7P2-201ENST00000427639 268 ntBASIC3.23□□□□□ -1.89
DUX3Q96PT4 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.23□□□□□ -1.89
DUX3Q96PT4 PSMA6P3-201ENST00000428242 164 ntBASIC3.23□□□□□ -1.89
DUX3Q96PT4 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.23□□□□□ -1.89
DUX3Q96PT4 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.23□□□□□ -1.89
DUX3Q96PT4 RPL23AP46-201ENST00000438548 490 ntBASIC3.23□□□□□ -1.89
DUX3Q96PT4 AL353748.1-201ENST00000440753 474 ntBASIC3.23□□□□□ -1.89
DUX3Q96PT4 USP9YP8-201ENST00000441913 500 ntBASIC3.23□□□□□ -1.89
DUX3Q96PT4 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC3.23□□□□□ -1.89
DUX3Q96PT4 HSPE1P28-201ENST00000443139 211 ntBASIC3.23□□□□□ -1.89
DUX3Q96PT4 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.23□□□□□ -1.89
DUX3Q96PT4 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.23□□□□□ -1.89
DUX3Q96PT4 HSFY6P-201ENST00000445573 403 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 135.8 ms