Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 HSPE1P5-201ENST00000561489 272 ntBASIC3.17□□□□□ -1.9
RFT1Q96AA3 AC037471.2-201ENST00000564941 598 ntBASIC3.17□□□□□ -1.9
RFT1Q96AA3 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.17□□□□□ -1.9
RFT1Q96AA3 MIR4700-201ENST00000578311 74 ntBASIC3.17□□□□□ -1.9
RFT1Q96AA3 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.17□□□□□ -1.9
RFT1Q96AA3 AC008507.1-201ENST00000587506 734 ntBASIC3.17□□□□□ -1.9
RFT1Q96AA3 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.17□□□□□ -1.9
RFT1Q96AA3 AP001429.1-201ENST00000602568 530 ntBASIC3.17□□□□□ -1.9
RFT1Q96AA3 AP000811.1-201ENST00000603803 651 ntBASIC3.17□□□□□ -1.9
RFT1Q96AA3 AC018714.1-201ENST00000605028 208 ntBASIC3.17□□□□□ -1.9
RFT1Q96AA3 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.17□□□□□ -1.9
RFT1Q96AA3 AC004832.5-201ENST00000608677 401 ntBASIC3.17□□□□□ -1.9
RFT1Q96AA3 AC072039.2-201ENST00000608883 439 ntBASIC3.17□□□□□ -1.9
RFT1Q96AA3 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.17□□□□□ -1.9
RFT1Q96AA3 AC006338.2-201ENST00000616864 791 ntBASIC3.17□□□□□ -1.9
RFT1Q96AA3 MIR6875-201ENST00000617506 72 ntBASIC3.17□□□□□ -1.9
RFT1Q96AA3 AL161637.1-201ENST00000622380 412 ntBASIC3.17□□□□□ -1.9
RFT1Q96AA3 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.17□□□□□ -1.9
RFT1Q96AA3 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
RFT1Q96AA3 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.17□□□□□ -1.9
RFT1Q96AA3 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RFT1Q96AA3 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
RFT1Q96AA3 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.17□□□□□ -1.9
RFT1Q96AA3 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RFT1Q96AA3 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.17□□□□□ -1.9
RFT1Q96AA3 ZNF807-201ENST00000328088 1707 ntBASIC3.16□□□□□ -1.9
RFT1Q96AA3 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RFT1Q96AA3 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.16□□□□□ -1.9
RFT1Q96AA3 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
RFT1Q96AA3 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
RFT1Q96AA3 AC007656.2-201ENST00000624902 4547 ntBASIC3.16□□□□□ -1.9
RFT1Q96AA3 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RFT1Q96AA3 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.16□□□□□ -1.9
RFT1Q96AA3 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.16□□□□□ -1.9
RFT1Q96AA3 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
RFT1Q96AA3 RNU6-213P-201ENST00000384051 104 ntBASIC3.16□□□□□ -1.9
RFT1Q96AA3 MIR30B-201ENST00000384850 88 ntBASIC3.16□□□□□ -1.9
RFT1Q96AA3 SAR1AP2-201ENST00000392696 594 ntBASIC3.16□□□□□ -1.9
RFT1Q96AA3 AL591034.1-201ENST00000407447 340 ntBASIC3.16□□□□□ -1.9
RFT1Q96AA3 MIR1305-201ENST00000408300 86 ntBASIC3.16□□□□□ -1.9
RFT1Q96AA3 U3.42-201ENST00000408746 214 ntBASIC3.16□□□□□ -1.9
RFT1Q96AA3 RNA5SP293-201ENST00000410527 113 ntBASIC3.16□□□□□ -1.9
RFT1Q96AA3 MTCO1P17-201ENST00000411522 491 ntBASIC3.16□□□□□ -1.9
RFT1Q96AA3 TPMTP3-201ENST00000411928 735 ntBASIC3.16□□□□□ -1.9
RFT1Q96AA3 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.16□□□□□ -1.9
RFT1Q96AA3 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.16□□□□□ -1.9
RFT1Q96AA3 UBE2D3P2-201ENST00000424409 445 ntBASIC3.16□□□□□ -1.9
RFT1Q96AA3 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.16□□□□□ -1.9
RFT1Q96AA3 AC090774.1-201ENST00000435925 246 ntBASIC3.16□□□□□ -1.9
RFT1Q96AA3 UBE2D3P1-201ENST00000436669 444 ntBASIC3.16□□□□□ -1.9
RFT1Q96AA3 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.16□□□□□ -1.9
RFT1Q96AA3 AL445567.1-201ENST00000439121 144 ntBASIC3.16□□□□□ -1.9
RFT1Q96AA3 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.16□□□□□ -1.9
RFT1Q96AA3 AC104978.1-201ENST00000449387 391 ntBASIC3.16□□□□□ -1.9
RFT1Q96AA3 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.16□□□□□ -1.9
RFT1Q96AA3 AC093392.2-201ENST00000450682 337 ntBASIC3.16□□□□□ -1.9
RFT1Q96AA3 AL133217.1-201ENST00000450980 425 ntBASIC3.16□□□□□ -1.9
RFT1Q96AA3 AC009220.1-201ENST00000451614 275 ntBASIC3.16□□□□□ -1.9
RFT1Q96AA3 AC234775.1-201ENST00000454247 670 ntBASIC3.16□□□□□ -1.9
RFT1Q96AA3 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.16□□□□□ -1.9
RFT1Q96AA3 AC106872.3-201ENST00000495104 446 ntBASIC3.16□□□□□ -1.9
RFT1Q96AA3 LTV1P1-201ENST00000510683 1237 ntBASIC3.16□□□□□ -1.9
RFT1Q96AA3 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.16□□□□□ -1.9
RFT1Q96AA3 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.16□□□□□ -1.9
RFT1Q96AA3 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.16□□□□□ -1.9
RFT1Q96AA3 MRPS33P3-201ENST00000513456 322 ntBASIC3.16□□□□□ -1.9
RFT1Q96AA3 AC034159.1-201ENST00000513885 583 ntBASIC3.16□□□□□ -1.9
RFT1Q96AA3 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.16□□□□□ -1.9
RFT1Q96AA3 RNA5SP164-201ENST00000516533 110 ntBASIC3.16□□□□□ -1.9
RFT1Q96AA3 RNA5SP380-201ENST00000517190 98 ntBASIC3.16□□□□□ -1.9
RFT1Q96AA3 AC023161.2-201ENST00000551218 780 ntBASIC3.16□□□□□ -1.9
RFT1Q96AA3 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.16□□□□□ -1.9
RFT1Q96AA3 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.16□□□□□ -1.9
RFT1Q96AA3 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.16□□□□□ -1.9
RFT1Q96AA3 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.16□□□□□ -1.9
RFT1Q96AA3 AP005205.1-201ENST00000563503 508 ntBASIC3.16□□□□□ -1.9
RFT1Q96AA3 MTCO3P24-201ENST00000572729 782 ntBASIC3.16□□□□□ -1.9
RFT1Q96AA3 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.16□□□□□ -1.9
RFT1Q96AA3 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.16□□□□□ -1.9
RFT1Q96AA3 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.16□□□□□ -1.9
RFT1Q96AA3 AL158211.4-201ENST00000606988 584 ntBASIC3.16□□□□□ -1.9
RFT1Q96AA3 AL392048.1-201ENST00000613946 534 ntBASIC3.16□□□□□ -1.9
RFT1Q96AA3 AL450472.3-201ENST00000615578 367 ntBASIC3.16□□□□□ -1.9
RFT1Q96AA3 AC022149.2-201ENST00000621061 203 ntBASIC3.16□□□□□ -1.9
RFT1Q96AA3 AL356596.1-201ENST00000624230 379 ntBASIC3.16□□□□□ -1.9
RFT1Q96AA3 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.16□□□□□ -1.9
RFT1Q96AA3 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.16□□□□□ -1.9
RFT1Q96AA3 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.16□□□□□ -1.9
RFT1Q96AA3 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.16□□□□□ -1.9
RFT1Q96AA3 AF117829.1-206ENST00000621883 3802 ntBASIC3.16□□□□□ -1.9
RFT1Q96AA3 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.16□□□□□ -1.9
RFT1Q96AA3 AC068647.1-201ENST00000489539 2265 ntBASIC3.16□□□□□ -1.9
RFT1Q96AA3 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
RFT1Q96AA3 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
RFT1Q96AA3 MTCO1P9-201ENST00000505577 1534 ntBASIC3.15□□□□□ -1.9
RFT1Q96AA3 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
RFT1Q96AA3 DEFB108F-201ENST00000344638 222 ntBASIC3.15□□□□□ -1.91
RFT1Q96AA3 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
RFT1Q96AA3 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
RFT1Q96AA3 AL354719.1-201ENST00000406535 843 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms