Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 AIMP1P1-201ENST00000418670 937 ntBASIC4.11□□□□□ -1.75
ATP2A3Q93084 Z97055.1-201ENST00000419730 712 ntBASIC4.11□□□□□ -1.75
ATP2A3Q93084 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
ATP2A3Q93084 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC4.11□□□□□ -1.75
ATP2A3Q93084 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.11□□□□□ -1.75
ATP2A3Q93084 AL031667.1-201ENST00000440222 725 ntBASIC4.11□□□□□ -1.75
ATP2A3Q93084 NOTCH2P1-201ENST00000443481 624 ntBASIC4.11□□□□□ -1.75
ATP2A3Q93084 GDI2P2-201ENST00000445131 608 ntBASIC4.11□□□□□ -1.75
ATP2A3Q93084 USP9YP12-201ENST00000450481 570 ntBASIC4.11□□□□□ -1.75
ATP2A3Q93084 HMGB1P15-201ENST00000453854 435 ntBASIC4.11□□□□□ -1.75
ATP2A3Q93084 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC4.11□□□□□ -1.75
ATP2A3Q93084 BTF3P5-201ENST00000457252 467 ntBASIC4.11□□□□□ -1.75
ATP2A3Q93084 snoU13.24-201ENST00000458998 104 ntBASIC4.11□□□□□ -1.75
ATP2A3Q93084 AP001025.2-201ENST00000490908 477 ntBASIC4.11□□□□□ -1.75
ATP2A3Q93084 HMGB1P22-201ENST00000505315 124 ntBASIC4.11□□□□□ -1.75
ATP2A3Q93084 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
ATP2A3Q93084 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
ATP2A3Q93084 RPL37P25-201ENST00000507308 276 ntBASIC4.11□□□□□ -1.75
ATP2A3Q93084 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.11□□□□□ -1.75
ATP2A3Q93084 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.11□□□□□ -1.75
ATP2A3Q93084 RNU6-405P-201ENST00000516637 110 ntBASIC4.11□□□□□ -1.75
ATP2A3Q93084 RNA5SP179-201ENST00000517284 121 ntBASIC4.11□□□□□ -1.75
ATP2A3Q93084 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC4.11□□□□□ -1.75
ATP2A3Q93084 DUXAP2-201ENST00000519198 589 ntBASIC4.11□□□□□ -1.75
ATP2A3Q93084 AP002748.2-201ENST00000528671 348 ntBASIC4.11□□□□□ -1.75
ATP2A3Q93084 AL133241.1-201ENST00000556832 487 ntBASIC4.11□□□□□ -1.75
ATP2A3Q93084 MIR3690-201ENST00000580266 75 ntBASIC4.11□□□□□ -1.75
ATP2A3Q93084 TPMTP1-201ENST00000592307 737 ntBASIC4.11□□□□□ -1.75
ATP2A3Q93084 HMGB1P50-201ENST00000605814 607 ntBASIC4.11□□□□□ -1.75
ATP2A3Q93084 AC126118.1-201ENST00000607744 628 ntBASIC4.11□□□□□ -1.75
ATP2A3Q93084 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.11□□□□□ -1.75
ATP2A3Q93084 AL139089.1-201ENST00000620372 975 ntBASIC4.11□□□□□ -1.75
ATP2A3Q93084 AC073534.2-201ENST00000620377 381 ntBASIC4.11□□□□□ -1.75
ATP2A3Q93084 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.11□□□□□ -1.75
ATP2A3Q93084 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC4.11□□□□□ -1.75
ATP2A3Q93084 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.11□□□□□ -1.75
ATP2A3Q93084 CRYM-AS1-204ENST00000637983 556 ntBASIC4.11□□□□□ -1.75
ATP2A3Q93084 AC099654.13-201ENST00000639774 207 ntBASIC4.11□□□□□ -1.75
ATP2A3Q93084 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
ATP2A3Q93084 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
ATP2A3Q93084 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.11□□□□□ -1.75
ATP2A3Q93084 AP002001.2-201ENST00000529025 1469 ntBASIC4.11□□□□□ -1.75
ATP2A3Q93084 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
ATP2A3Q93084 FAM35DP-201ENST00000323387 2712 ntBASIC4.1□□□□□ -1.75
ATP2A3Q93084 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
ATP2A3Q93084 AL161781.1-201ENST00000354277 403 ntBASIC4.1□□□□□ -1.75
ATP2A3Q93084 RNY4P24-201ENST00000362735 96 ntBASIC4.1□□□□□ -1.75
ATP2A3Q93084 RNU6-744P-201ENST00000365557 107 ntBASIC4.1□□□□□ -1.75
ATP2A3Q93084 RNU6-1316P-201ENST00000384242 108 ntBASIC4.1□□□□□ -1.75
ATP2A3Q93084 RNU6-809P-201ENST00000384461 107 ntBASIC4.1□□□□□ -1.75
ATP2A3Q93084 MIR30B-201ENST00000384850 88 ntBASIC4.1□□□□□ -1.75
ATP2A3Q93084 MIR449B-201ENST00000384995 97 ntBASIC4.1□□□□□ -1.75
ATP2A3Q93084 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
ATP2A3Q93084 U3.29-201ENST00000391296 212 ntBASIC4.1□□□□□ -1.75
ATP2A3Q93084 Y_RNA.598-201ENST00000410480 95 ntBASIC4.1□□□□□ -1.75
ATP2A3Q93084 HMGN1P14-201ENST00000412459 517 ntBASIC4.1□□□□□ -1.75
ATP2A3Q93084 FCF1P9-201ENST00000412546 282 ntBASIC4.1□□□□□ -1.75
ATP2A3Q93084 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
ATP2A3Q93084 PSMA6P3-201ENST00000428242 164 ntBASIC4.1□□□□□ -1.75
ATP2A3Q93084 AL590233.1-201ENST00000430017 456 ntBASIC4.1□□□□□ -1.75
ATP2A3Q93084 AC011742.1-201ENST00000431448 434 ntBASIC4.1□□□□□ -1.75
ATP2A3Q93084 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.1□□□□□ -1.75
ATP2A3Q93084 RSU1P2-202ENST00000437884 485 ntBASIC4.1□□□□□ -1.75
ATP2A3Q93084 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.1□□□□□ -1.75
ATP2A3Q93084 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.1□□□□□ -1.75
ATP2A3Q93084 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.1□□□□□ -1.75
ATP2A3Q93084 RPL7P36-201ENST00000444633 681 ntBASIC4.1□□□□□ -1.75
ATP2A3Q93084 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.1□□□□□ -1.75
ATP2A3Q93084 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.1□□□□□ -1.75
ATP2A3Q93084 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.1□□□□□ -1.75
ATP2A3Q93084 FABP3P2-201ENST00000453169 399 ntBASIC4.1□□□□□ -1.75
ATP2A3Q93084 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
ATP2A3Q93084 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
ATP2A3Q93084 RPL31P61-201ENST00000496160 376 ntBASIC4.1□□□□□ -1.75
ATP2A3Q93084 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.1□□□□□ -1.75
ATP2A3Q93084 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
ATP2A3Q93084 AC109464.2-201ENST00000510242 943 ntBASIC4.1□□□□□ -1.75
ATP2A3Q93084 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.1□□□□□ -1.75
ATP2A3Q93084 RNU6-27P-201ENST00000516146 107 ntBASIC4.1□□□□□ -1.75
ATP2A3Q93084 RN7SKP289-201ENST00000517244 295 ntBASIC4.1□□□□□ -1.75
ATP2A3Q93084 TRMT10BP1-201ENST00000519377 943 ntBASIC4.1□□□□□ -1.75
ATP2A3Q93084 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.1□□□□□ -1.75
ATP2A3Q93084 AP003392.2-201ENST00000527269 208 ntBASIC4.1□□□□□ -1.75
ATP2A3Q93084 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.1□□□□□ -1.75
ATP2A3Q93084 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.1□□□□□ -1.75
ATP2A3Q93084 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.1□□□□□ -1.75
ATP2A3Q93084 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.1□□□□□ -1.75
ATP2A3Q93084 AC126177.3-201ENST00000551839 688 ntBASIC4.1□□□□□ -1.75
ATP2A3Q93084 ZNF519P3-201ENST00000557158 1032 ntBASIC4.1□□□□□ -1.75
ATP2A3Q93084 AL360157.1-201ENST00000565962 87 ntBASIC4.1□□□□□ -1.75
ATP2A3Q93084 AC234778.2-201ENST00000566241 354 ntBASIC4.1□□□□□ -1.75
ATP2A3Q93084 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC4.1□□□□□ -1.75
ATP2A3Q93084 MIR5697-201ENST00000578045 78 ntBASIC4.1□□□□□ -1.75
ATP2A3Q93084 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.1□□□□□ -1.75
ATP2A3Q93084 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.1□□□□□ -1.75
ATP2A3Q93084 BNIP3P8-201ENST00000597863 560 ntBASIC4.1□□□□□ -1.75
ATP2A3Q93084 BNIP3P30-201ENST00000601184 574 ntBASIC4.1□□□□□ -1.75
ATP2A3Q93084 AC015871.2-201ENST00000603605 948 ntBASIC4.1□□□□□ -1.75
ATP2A3Q93084 AC091167.4-201ENST00000605079 184 ntBASIC4.1□□□□□ -1.75
ATP2A3Q93084 BCRP9-201ENST00000605312 388 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms