Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 RPL7P60-201ENST00000397636 735 ntBASIC4.13□□□□□ -1.75
ATG4AQ8WYN0 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
ATG4AQ8WYN0 RPS4XP9-201ENST00000405151 780 ntBASIC4.13□□□□□ -1.75
ATG4AQ8WYN0 MIR1250-201ENST00000408098 113 ntBASIC4.13□□□□□ -1.75
ATG4AQ8WYN0 MIR1251-201ENST00000408552 70 ntBASIC4.13□□□□□ -1.75
ATG4AQ8WYN0 AL807761.1-201ENST00000417622 171 ntBASIC4.13□□□□□ -1.75
ATG4AQ8WYN0 RPS15AP12-201ENST00000419498 388 ntBASIC4.13□□□□□ -1.75
ATG4AQ8WYN0 ELOCP4-201ENST00000420090 333 ntBASIC4.13□□□□□ -1.75
ATG4AQ8WYN0 AL353193.1-201ENST00000421444 268 ntBASIC4.13□□□□□ -1.75
ATG4AQ8WYN0 AC007283.2-201ENST00000424739 197 ntBASIC4.13□□□□□ -1.75
ATG4AQ8WYN0 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC4.13□□□□□ -1.75
ATG4AQ8WYN0 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
ATG4AQ8WYN0 AL121601.2-201ENST00000438019 707 ntBASIC4.13□□□□□ -1.75
ATG4AQ8WYN0 TPT1P13-201ENST00000449760 499 ntBASIC4.13□□□□□ -1.75
ATG4AQ8WYN0 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.13□□□□□ -1.75
ATG4AQ8WYN0 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.13□□□□□ -1.75
ATG4AQ8WYN0 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.13□□□□□ -1.75
ATG4AQ8WYN0 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
ATG4AQ8WYN0 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.13□□□□□ -1.75
ATG4AQ8WYN0 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.13□□□□□ -1.75
ATG4AQ8WYN0 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
ATG4AQ8WYN0 RNA5SP337-201ENST00000517007 109 ntBASIC4.13□□□□□ -1.75
ATG4AQ8WYN0 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.13□□□□□ -1.75
ATG4AQ8WYN0 MTND1P35-201ENST00000526739 508 ntBASIC4.13□□□□□ -1.75
ATG4AQ8WYN0 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
ATG4AQ8WYN0 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC4.13□□□□□ -1.75
ATG4AQ8WYN0 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.13□□□□□ -1.75
ATG4AQ8WYN0 AC068446.3-201ENST00000555285 382 ntBASIC4.13□□□□□ -1.75
ATG4AQ8WYN0 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.13□□□□□ -1.75
ATG4AQ8WYN0 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.13□□□□□ -1.75
ATG4AQ8WYN0 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.13□□□□□ -1.75
ATG4AQ8WYN0 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.13□□□□□ -1.75
ATG4AQ8WYN0 OR6R2P-201ENST00000609216 300 ntBASIC4.13□□□□□ -1.75
ATG4AQ8WYN0 AC025253.1-201ENST00000613623 543 ntBASIC4.13□□□□□ -1.75
ATG4AQ8WYN0 AC002550.2-201ENST00000621246 394 ntBASIC4.13□□□□□ -1.75
ATG4AQ8WYN0 AC040168.1-201ENST00000623594 991 ntBASIC4.13□□□□□ -1.75
ATG4AQ8WYN0 MIR3653-201ENST00000625572 110 ntBASIC4.13□□□□□ -1.75
ATG4AQ8WYN0 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.13□□□□□ -1.75
ATG4AQ8WYN0 AL356489.2-201ENST00000566968 3528 ntBASIC4.13□□□□□ -1.75
ATG4AQ8WYN0 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
ATG4AQ8WYN0 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.13□□□□□ -1.75
ATG4AQ8WYN0 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
ATG4AQ8WYN0 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
ATG4AQ8WYN0 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.12□□□□□ -1.75
ATG4AQ8WYN0 IPO8P1-201ENST00000455509 3109 ntBASIC4.12□□□□□ -1.75
ATG4AQ8WYN0 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.12□□□□□ -1.75
ATG4AQ8WYN0 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
ATG4AQ8WYN0 RNA5SP399-201ENST00000364003 117 ntBASIC4.12□□□□□ -1.75
ATG4AQ8WYN0 RNY1P12-201ENST00000364251 105 ntBASIC4.12□□□□□ -1.75
ATG4AQ8WYN0 RNU6-456P-201ENST00000384493 107 ntBASIC4.12□□□□□ -1.75
ATG4AQ8WYN0 MIR708-201ENST00000390708 88 ntBASIC4.12□□□□□ -1.75
ATG4AQ8WYN0 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.12□□□□□ -1.75
ATG4AQ8WYN0 MTATP6P18-201ENST00000417994 673 ntBASIC4.12□□□□□ -1.75
ATG4AQ8WYN0 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.12□□□□□ -1.75
ATG4AQ8WYN0 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC4.12□□□□□ -1.75
ATG4AQ8WYN0 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.12□□□□□ -1.75
ATG4AQ8WYN0 KCTD9P3-201ENST00000434597 1169 ntBASIC4.12□□□□□ -1.75
ATG4AQ8WYN0 FTH1P1-201ENST00000437933 532 ntBASIC4.12□□□□□ -1.75
ATG4AQ8WYN0 AL671855.1-201ENST00000446875 1203 ntBASIC4.12□□□□□ -1.75
ATG4AQ8WYN0 MTND3P10-201ENST00000450967 341 ntBASIC4.12□□□□□ -1.75
ATG4AQ8WYN0 RPS11P1-201ENST00000451072 473 ntBASIC4.12□□□□□ -1.75
ATG4AQ8WYN0 IFNWP4-201ENST00000453148 294 ntBASIC4.12□□□□□ -1.75
ATG4AQ8WYN0 MTND1P9-201ENST00000453775 944 ntBASIC4.12□□□□□ -1.75
ATG4AQ8WYN0 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.12□□□□□ -1.75
ATG4AQ8WYN0 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.12□□□□□ -1.75
ATG4AQ8WYN0 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.12□□□□□ -1.75
ATG4AQ8WYN0 snoU109.4-201ENST00000458953 143 ntBASIC4.12□□□□□ -1.75
ATG4AQ8WYN0 AC091167.1-201ENST00000492017 396 ntBASIC4.12□□□□□ -1.75
ATG4AQ8WYN0 RPS27AP13-201ENST00000498403 237 ntBASIC4.12□□□□□ -1.75
ATG4AQ8WYN0 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.12□□□□□ -1.75
ATG4AQ8WYN0 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.12□□□□□ -1.75
ATG4AQ8WYN0 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4.12□□□□□ -1.75
ATG4AQ8WYN0 AC090281.1-201ENST00000523019 276 ntBASIC4.12□□□□□ -1.75
ATG4AQ8WYN0 OR4P1P-201ENST00000530808 1136 ntBASIC4.12□□□□□ -1.75
ATG4AQ8WYN0 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.12□□□□□ -1.75
ATG4AQ8WYN0 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
ATG4AQ8WYN0 SETP7-201ENST00000552169 453 ntBASIC4.12□□□□□ -1.75
ATG4AQ8WYN0 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.12□□□□□ -1.75
ATG4AQ8WYN0 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.12□□□□□ -1.75
ATG4AQ8WYN0 MIR4277-201ENST00000578298 84 ntBASIC4.12□□□□□ -1.75
ATG4AQ8WYN0 MIR5096-201ENST00000583713 70 ntBASIC4.12□□□□□ -1.75
ATG4AQ8WYN0 KC877982.1-201ENST00000602313 470 ntBASIC4.12□□□□□ -1.75
ATG4AQ8WYN0 MIR6868-201ENST00000611215 58 ntBASIC4.12□□□□□ -1.75
ATG4AQ8WYN0 uc_338.12-201ENST00000616344 181 ntBASIC4.12□□□□□ -1.75
ATG4AQ8WYN0 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.12□□□□□ -1.75
ATG4AQ8WYN0 AL356585.4-201ENST00000623078 1229 ntBASIC4.12□□□□□ -1.75
ATG4AQ8WYN0 AC112204.3-201ENST00000623822 332 ntBASIC4.12□□□□□ -1.75
ATG4AQ8WYN0 AC009161.2-201ENST00000624626 138 ntBASIC4.12□□□□□ -1.75
ATG4AQ8WYN0 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
ATG4AQ8WYN0 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
ATG4AQ8WYN0 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
ATG4AQ8WYN0 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
ATG4AQ8WYN0 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
ATG4AQ8WYN0 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
ATG4AQ8WYN0 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
ATG4AQ8WYN0 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
ATG4AQ8WYN0 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.11□□□□□ -1.75
ATG4AQ8WYN0 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
ATG4AQ8WYN0 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
ATG4AQ8WYN0 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms