Protein–RNA interactions for Protein: Q8TE82

SH3TC1, SH3 domain and tetratricopeptide repeat-containing protein 1, humanhuman

Predictions only

Length 1,336 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1Q8TE82 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.22□□□□□ -1.89
SH3TC1Q8TE82 RNU1-41P-201ENST00000516161 162 ntBASIC3.22□□□□□ -1.89
SH3TC1Q8TE82 Y_RNA.673-201ENST00000516306 88 ntBASIC3.22□□□□□ -1.89
SH3TC1Q8TE82 RNU1-48P-201ENST00000516400 162 ntBASIC3.22□□□□□ -1.89
SH3TC1Q8TE82 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.22□□□□□ -1.89
SH3TC1Q8TE82 EEF1A1P37-201ENST00000522748 715 ntBASIC3.22□□□□□ -1.89
SH3TC1Q8TE82 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.22□□□□□ -1.89
SH3TC1Q8TE82 AC068339.2-201ENST00000534395 618 ntBASIC3.22□□□□□ -1.89
SH3TC1Q8TE82 AP002770.2-201ENST00000543613 532 ntBASIC3.22□□□□□ -1.89
SH3TC1Q8TE82 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
SH3TC1Q8TE82 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.22□□□□□ -1.89
SH3TC1Q8TE82 AC107954.1-201ENST00000565906 727 ntBASIC3.22□□□□□ -1.89
SH3TC1Q8TE82 AC090666.1-201ENST00000578241 445 ntBASIC3.22□□□□□ -1.89
SH3TC1Q8TE82 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.22□□□□□ -1.89
SH3TC1Q8TE82 AC022069.1-201ENST00000582910 658 ntBASIC3.22□□□□□ -1.89
SH3TC1Q8TE82 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.22□□□□□ -1.89
SH3TC1Q8TE82 DNAJC19P3-201ENST00000594491 331 ntBASIC3.22□□□□□ -1.89
SH3TC1Q8TE82 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.22□□□□□ -1.89
SH3TC1Q8TE82 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.22□□□□□ -1.89
SH3TC1Q8TE82 VN1R74P-201ENST00000613259 503 ntBASIC3.22□□□□□ -1.89
SH3TC1Q8TE82 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SH3TC1Q8TE82 U4.3-201ENST00000621047 82 ntBASIC3.22□□□□□ -1.89
SH3TC1Q8TE82 AC006927.2-201ENST00000639256 389 ntBASIC3.22□□□□□ -1.89
SH3TC1Q8TE82 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.22□□□□□ -1.89
SH3TC1Q8TE82 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SH3TC1Q8TE82 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.22□□□□□ -1.89
SH3TC1Q8TE82 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
SH3TC1Q8TE82 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.21□□□□□ -1.89
SH3TC1Q8TE82 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.21□□□□□ -1.89
SH3TC1Q8TE82 RNU6-629P-201ENST00000384061 103 ntBASIC3.21□□□□□ -1.89
SH3TC1Q8TE82 SNORA36C-201ENST00000384289 132 ntBASIC3.21□□□□□ -1.89
SH3TC1Q8TE82 MIR518C-201ENST00000384822 101 ntBASIC3.21□□□□□ -1.89
SH3TC1Q8TE82 UBE2V1P9-201ENST00000414760 368 ntBASIC3.21□□□□□ -1.89
SH3TC1Q8TE82 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC3.21□□□□□ -1.89
SH3TC1Q8TE82 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
SH3TC1Q8TE82 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC3.21□□□□□ -1.89
SH3TC1Q8TE82 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.21□□□□□ -1.89
SH3TC1Q8TE82 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.21□□□□□ -1.89
SH3TC1Q8TE82 AC093801.2-201ENST00000503966 1050 ntBASIC3.21□□□□□ -1.89
SH3TC1Q8TE82 AC091860.1-201ENST00000505723 432 ntBASIC3.21□□□□□ -1.89
SH3TC1Q8TE82 RN7SKP24-201ENST00000515888 284 ntBASIC3.21□□□□□ -1.89
SH3TC1Q8TE82 RNA5SP24-201ENST00000516478 95 ntBASIC3.21□□□□□ -1.89
SH3TC1Q8TE82 AC100870.1-201ENST00000522035 505 ntBASIC3.21□□□□□ -1.89
SH3TC1Q8TE82 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.21□□□□□ -1.89
SH3TC1Q8TE82 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.21□□□□□ -1.89
SH3TC1Q8TE82 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.21□□□□□ -1.89
SH3TC1Q8TE82 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
SH3TC1Q8TE82 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC3.21□□□□□ -1.89
SH3TC1Q8TE82 AC104072.1-201ENST00000568817 668 ntBASIC3.21□□□□□ -1.89
SH3TC1Q8TE82 SNORD53-201ENST00000579969 78 ntBASIC3.21□□□□□ -1.89
SH3TC1Q8TE82 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.21□□□□□ -1.89
SH3TC1Q8TE82 AC002487.1-201ENST00000604565 994 ntBASIC3.21□□□□□ -1.89
SH3TC1Q8TE82 AC064859.1-201ENST00000624741 174 ntBASIC3.21□□□□□ -1.89
SH3TC1Q8TE82 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.21□□□□□ -1.89
SH3TC1Q8TE82 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.21□□□□□ -1.89
SH3TC1Q8TE82 MIR6733-201ENST00000635723 61 ntBASIC3.21□□□□□ -1.89
SH3TC1Q8TE82 AC068620.4-201ENST00000636730 1182 ntBASIC3.21□□□□□ -1.89
SH3TC1Q8TE82 AC010733.2-201ENST00000589496 5702 ntBASIC3.21□□□□□ -1.9
SH3TC1Q8TE82 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
SH3TC1Q8TE82 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.21□□□□□ -1.9
SH3TC1Q8TE82 RNU6-441P-201ENST00000384545 106 ntBASIC3.2□□□□□ -1.9
SH3TC1Q8TE82 AL591034.1-201ENST00000407447 340 ntBASIC3.2□□□□□ -1.9
SH3TC1Q8TE82 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.2□□□□□ -1.9
SH3TC1Q8TE82 AC009237.2-201ENST00000421358 284 ntBASIC3.2□□□□□ -1.9
SH3TC1Q8TE82 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.2□□□□□ -1.9
SH3TC1Q8TE82 RPS26P56-201ENST00000444468 240 ntBASIC3.2□□□□□ -1.9
SH3TC1Q8TE82 GSTA11P-201ENST00000452866 669 ntBASIC3.2□□□□□ -1.9
SH3TC1Q8TE82 HMGB1P15-201ENST00000453854 435 ntBASIC3.2□□□□□ -1.9
SH3TC1Q8TE82 OR6K1P-201ENST00000456766 971 ntBASIC3.2□□□□□ -1.9
SH3TC1Q8TE82 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SH3TC1Q8TE82 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SH3TC1Q8TE82 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SH3TC1Q8TE82 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.2□□□□□ -1.9
SH3TC1Q8TE82 AC008549.1-201ENST00000512900 643 ntBASIC3.2□□□□□ -1.9
SH3TC1Q8TE82 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SH3TC1Q8TE82 RNU6-711P-201ENST00000517255 106 ntBASIC3.2□□□□□ -1.9
SH3TC1Q8TE82 AC239860.2-201ENST00000525886 270 ntBASIC3.2□□□□□ -1.9
SH3TC1Q8TE82 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.2□□□□□ -1.9
SH3TC1Q8TE82 AC087894.1-201ENST00000538359 518 ntBASIC3.2□□□□□ -1.9
SH3TC1Q8TE82 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.2□□□□□ -1.9
SH3TC1Q8TE82 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.2□□□□□ -1.9
SH3TC1Q8TE82 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.2□□□□□ -1.9
SH3TC1Q8TE82 ZNF971P-201ENST00000562068 1249 ntBASIC3.2□□□□□ -1.9
SH3TC1Q8TE82 AC099785.1-201ENST00000605697 437 ntBASIC3.2□□□□□ -1.9
SH3TC1Q8TE82 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
SH3TC1Q8TE82 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SH3TC1Q8TE82 RNVU1-3-201ENST00000364313 161 ntBASIC3.19□□□□□ -1.9
SH3TC1Q8TE82 RNU6-1226P-201ENST00000384317 107 ntBASIC3.19□□□□□ -1.9
SH3TC1Q8TE82 RNU6-549P-201ENST00000384433 107 ntBASIC3.19□□□□□ -1.9
SH3TC1Q8TE82 RPS4XP7-201ENST00000406274 780 ntBASIC3.19□□□□□ -1.9
SH3TC1Q8TE82 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.19□□□□□ -1.9
SH3TC1Q8TE82 RNU6-575P-201ENST00000411326 105 ntBASIC3.19□□□□□ -1.9
SH3TC1Q8TE82 HSPE1P1-201ENST00000421494 318 ntBASIC3.19□□□□□ -1.9
SH3TC1Q8TE82 SFR1P2-201ENST00000421841 730 ntBASIC3.19□□□□□ -1.9
SH3TC1Q8TE82 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.19□□□□□ -1.9
SH3TC1Q8TE82 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.19□□□□□ -1.9
SH3TC1Q8TE82 AC104332.2-201ENST00000429959 156 ntBASIC3.19□□□□□ -1.9
SH3TC1Q8TE82 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.19□□□□□ -1.9
SH3TC1Q8TE82 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.19□□□□□ -1.9
SH3TC1Q8TE82 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms