Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 AL513185.3-201ENST00000433335 1300 ntBASIC2.31□□□□□ -2.04
ZIC4Q8N9L1 AL365361.1-201ENST00000566942 3481 ntBASIC2.31□□□□□ -2.04
ZIC4Q8N9L1 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
ZIC4Q8N9L1 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
ZIC4Q8N9L1 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.3□□□□□ -2.04
ZIC4Q8N9L1 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.3□□□□□ -2.04
ZIC4Q8N9L1 RNU6-251P-201ENST00000363235 104 ntBASIC2.3□□□□□ -2.04
ZIC4Q8N9L1 SNORD21-201ENST00000383953 95 ntBASIC2.3□□□□□ -2.04
ZIC4Q8N9L1 SNORD51-201ENST00000384320 80 ntBASIC2.3□□□□□ -2.04
ZIC4Q8N9L1 SNORD116-23-201ENST00000384645 92 ntBASIC2.3□□□□□ -2.04
ZIC4Q8N9L1 RNA5SP210-201ENST00000391034 120 ntBASIC2.3□□□□□ -2.04
ZIC4Q8N9L1 RPL19P1-201ENST00000411635 428 ntBASIC2.3□□□□□ -2.04
ZIC4Q8N9L1 HMGN2P35-201ENST00000412164 270 ntBASIC2.3□□□□□ -2.04
ZIC4Q8N9L1 RPS20P25-201ENST00000412447 352 ntBASIC2.3□□□□□ -2.04
ZIC4Q8N9L1 FCF1P2-201ENST00000415284 583 ntBASIC2.3□□□□□ -2.04
ZIC4Q8N9L1 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.3□□□□□ -2.04
ZIC4Q8N9L1 AL357078.2-201ENST00000416486 427 ntBASIC2.3□□□□□ -2.04
ZIC4Q8N9L1 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.3□□□□□ -2.04
ZIC4Q8N9L1 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.3□□□□□ -2.04
ZIC4Q8N9L1 ARL5AP4-201ENST00000430731 512 ntBASIC2.3□□□□□ -2.04
ZIC4Q8N9L1 EZH2P1-201ENST00000431167 291 ntBASIC2.3□□□□□ -2.04
ZIC4Q8N9L1 AL031183.1-201ENST00000457667 207 ntBASIC2.3□□□□□ -2.04
ZIC4Q8N9L1 RPS29P12-201ENST00000460178 152 ntBASIC2.3□□□□□ -2.04
ZIC4Q8N9L1 OR52A4P-202ENST00000481634 799 ntBASIC2.3□□□□□ -2.04
ZIC4Q8N9L1 AC243972.3-201ENST00000539655 198 ntBASIC2.3□□□□□ -2.04
ZIC4Q8N9L1 ELOCP31-201ENST00000540463 467 ntBASIC2.3□□□□□ -2.04
ZIC4Q8N9L1 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.3□□□□□ -2.04
ZIC4Q8N9L1 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.3□□□□□ -2.04
ZIC4Q8N9L1 AC079148.1-201ENST00000565944 819 ntBASIC2.3□□□□□ -2.04
ZIC4Q8N9L1 AC124283.4-201ENST00000581815 456 ntBASIC2.3□□□□□ -2.04
ZIC4Q8N9L1 DUXAP4-201ENST00000603046 613 ntBASIC2.3□□□□□ -2.04
ZIC4Q8N9L1 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.3□□□□□ -2.04
ZIC4Q8N9L1 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
ZIC4Q8N9L1 AC008083.4-201ENST00000615076 444 ntBASIC2.3□□□□□ -2.04
ZIC4Q8N9L1 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.3□□□□□ -2.04
ZIC4Q8N9L1 AL445493.3-201ENST00000619568 477 ntBASIC2.3□□□□□ -2.04
ZIC4Q8N9L1 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
ZIC4Q8N9L1 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.29□□□□□ -2.04
ZIC4Q8N9L1 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.29□□□□□ -2.04
ZIC4Q8N9L1 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
ZIC4Q8N9L1 AP000526.1-201ENST00000603308 1388 ntBASIC2.29□□□□□ -2.04
ZIC4Q8N9L1 AL589826.1-201ENST00000340697 249 ntBASIC2.29□□□□□ -2.04
ZIC4Q8N9L1 RNU6-582P-201ENST00000362989 107 ntBASIC2.29□□□□□ -2.04
ZIC4Q8N9L1 VTRNA1-1-201ENST00000363120 99 ntBASIC2.29□□□□□ -2.04
ZIC4Q8N9L1 RNA5SP139-201ENST00000364340 117 ntBASIC2.29□□□□□ -2.04
ZIC4Q8N9L1 RNU1-100P-201ENST00000365255 165 ntBASIC2.29□□□□□ -2.04
ZIC4Q8N9L1 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC2.29□□□□□ -2.04
ZIC4Q8N9L1 RNU6-932P-201ENST00000391108 106 ntBASIC2.29□□□□□ -2.04
ZIC4Q8N9L1 AL136372.1-201ENST00000403060 228 ntBASIC2.29□□□□□ -2.04
ZIC4Q8N9L1 RPL27AP8-201ENST00000424277 446 ntBASIC2.29□□□□□ -2.04
ZIC4Q8N9L1 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.29□□□□□ -2.04
ZIC4Q8N9L1 AC241584.1-201ENST00000438469 1241 ntBASIC2.29□□□□□ -2.04
ZIC4Q8N9L1 AL353718.1-201ENST00000451028 517 ntBASIC2.29□□□□□ -2.04
ZIC4Q8N9L1 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.29□□□□□ -2.04
ZIC4Q8N9L1 RNU7-140P-201ENST00000459546 60 ntBASIC2.29□□□□□ -2.04
ZIC4Q8N9L1 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.29□□□□□ -2.04
ZIC4Q8N9L1 AC084024.2-201ENST00000503480 791 ntBASIC2.29□□□□□ -2.04
ZIC4Q8N9L1 RNU1-103P-201ENST00000516502 125 ntBASIC2.29□□□□□ -2.04
ZIC4Q8N9L1 RNU6-885P-201ENST00000516607 104 ntBASIC2.29□□□□□ -2.04
ZIC4Q8N9L1 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
ZIC4Q8N9L1 AC025881.1-201ENST00000518851 512 ntBASIC2.29□□□□□ -2.04
ZIC4Q8N9L1 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC2.29□□□□□ -2.04
ZIC4Q8N9L1 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC2.29□□□□□ -2.04
ZIC4Q8N9L1 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.29□□□□□ -2.04
ZIC4Q8N9L1 AC123904.3-201ENST00000547218 814 ntBASIC2.29□□□□□ -2.04
ZIC4Q8N9L1 AC008127.2-201ENST00000549925 1075 ntBASIC2.29□□□□□ -2.04
ZIC4Q8N9L1 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.29□□□□□ -2.04
ZIC4Q8N9L1 MIR3670-2-201ENST00000582974 65 ntBASIC2.29□□□□□ -2.04
ZIC4Q8N9L1 MIR3670-1-201ENST00000584160 65 ntBASIC2.29□□□□□ -2.04
ZIC4Q8N9L1 MIR3670-3-201ENST00000584855 65 ntBASIC2.29□□□□□ -2.04
ZIC4Q8N9L1 NUTF2P8-201ENST00000604593 363 ntBASIC2.29□□□□□ -2.04
ZIC4Q8N9L1 AC012443.1-201ENST00000605605 231 ntBASIC2.29□□□□□ -2.04
ZIC4Q8N9L1 RPL23AP88-201ENST00000605759 454 ntBASIC2.29□□□□□ -2.04
ZIC4Q8N9L1 AP002826.1-201ENST00000608835 315 ntBASIC2.29□□□□□ -2.04
ZIC4Q8N9L1 MIR3670-4-201ENST00000612260 65 ntBASIC2.29□□□□□ -2.04
ZIC4Q8N9L1 AP003485.2-201ENST00000623636 610 ntBASIC2.29□□□□□ -2.04
ZIC4Q8N9L1 AC079228.1-201ENST00000624774 1049 ntBASIC2.29□□□□□ -2.04
ZIC4Q8N9L1 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.29□□□□□ -2.04
ZIC4Q8N9L1 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
ZIC4Q8N9L1 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
ZIC4Q8N9L1 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
ZIC4Q8N9L1 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.28□□□□□ -2.04
ZIC4Q8N9L1 SNORD62.1-201ENST00000362541 86 ntBASIC2.28□□□□□ -2.04
ZIC4Q8N9L1 RNU6-549P-201ENST00000384433 107 ntBASIC2.28□□□□□ -2.04
ZIC4Q8N9L1 RNA5SP252-201ENST00000391131 119 ntBASIC2.28□□□□□ -2.04
ZIC4Q8N9L1 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
ZIC4Q8N9L1 AL355615.1-201ENST00000406187 641 ntBASIC2.28□□□□□ -2.04
ZIC4Q8N9L1 RNU2-15P-201ENST00000410692 191 ntBASIC2.28□□□□□ -2.04
ZIC4Q8N9L1 AL137014.1-201ENST00000420490 1226 ntBASIC2.28□□□□□ -2.04
ZIC4Q8N9L1 OFD1P2Y-201ENST00000421895 1149 ntBASIC2.28□□□□□ -2.04
ZIC4Q8N9L1 RPL23AP58-201ENST00000440453 469 ntBASIC2.28□□□□□ -2.04
ZIC4Q8N9L1 GXYLT1P1-201ENST00000446657 490 ntBASIC2.28□□□□□ -2.04
ZIC4Q8N9L1 MTCO1P48-201ENST00000448024 1096 ntBASIC2.28□□□□□ -2.04
ZIC4Q8N9L1 OR51B8P-201ENST00000449892 769 ntBASIC2.28□□□□□ -2.04
ZIC4Q8N9L1 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.28□□□□□ -2.04
ZIC4Q8N9L1 AP000705.1-201ENST00000454567 350 ntBASIC2.28□□□□□ -2.04
ZIC4Q8N9L1 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.28□□□□□ -2.04
ZIC4Q8N9L1 AL359385.1-201ENST00000456509 365 ntBASIC2.28□□□□□ -2.04
ZIC4Q8N9L1 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.28□□□□□ -2.04
ZIC4Q8N9L1 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms