Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 OR9R1P-201ENST00000412200 877 ntBASIC4.3□□□□□ -1.72
SLC44A3Q8N4M1 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.3□□□□□ -1.72
SLC44A3Q8N4M1 MTATP6P18-201ENST00000417994 673 ntBASIC4.3□□□□□ -1.72
SLC44A3Q8N4M1 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.3□□□□□ -1.72
SLC44A3Q8N4M1 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.3□□□□□ -1.72
SLC44A3Q8N4M1 PDSS1P1-201ENST00000422953 1114 ntBASIC4.3□□□□□ -1.72
SLC44A3Q8N4M1 TAAR7P-201ENST00000436141 242 ntBASIC4.3□□□□□ -1.72
SLC44A3Q8N4M1 NOTCH2P1-201ENST00000443481 624 ntBASIC4.3□□□□□ -1.72
SLC44A3Q8N4M1 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC4.3□□□□□ -1.72
SLC44A3Q8N4M1 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.3□□□□□ -1.72
SLC44A3Q8N4M1 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.3□□□□□ -1.72
SLC44A3Q8N4M1 AL354710.1-201ENST00000453641 246 ntBASIC4.3□□□□□ -1.72
SLC44A3Q8N4M1 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.3□□□□□ -1.72
SLC44A3Q8N4M1 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.3□□□□□ -1.72
SLC44A3Q8N4M1 RPS20P20-201ENST00000460498 340 ntBASIC4.3□□□□□ -1.72
SLC44A3Q8N4M1 RPL7P15-201ENST00000461190 712 ntBASIC4.3□□□□□ -1.72
SLC44A3Q8N4M1 AP000893.1-201ENST00000474462 794 ntBASIC4.3□□□□□ -1.72
SLC44A3Q8N4M1 RPS29P19-201ENST00000479709 171 ntBASIC4.3□□□□□ -1.72
SLC44A3Q8N4M1 AC110792.1-201ENST00000491826 472 ntBASIC4.3□□□□□ -1.72
SLC44A3Q8N4M1 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC4.3□□□□□ -1.72
SLC44A3Q8N4M1 AC010486.1-201ENST00000511793 424 ntBASIC4.3□□□□□ -1.72
SLC44A3Q8N4M1 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.3□□□□□ -1.72
SLC44A3Q8N4M1 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.3□□□□□ -1.72
SLC44A3Q8N4M1 AC123904.2-201ENST00000548059 300 ntBASIC4.3□□□□□ -1.72
SLC44A3Q8N4M1 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC4.3□□□□□ -1.72
SLC44A3Q8N4M1 MIR3167-201ENST00000579623 85 ntBASIC4.3□□□□□ -1.72
SLC44A3Q8N4M1 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC4.3□□□□□ -1.72
SLC44A3Q8N4M1 MIR4795-201ENST00000584182 89 ntBASIC4.3□□□□□ -1.72
SLC44A3Q8N4M1 AL353997.4-201ENST00000586196 166 ntBASIC4.3□□□□□ -1.72
SLC44A3Q8N4M1 AC011468.4-201ENST00000603942 409 ntBASIC4.3□□□□□ -1.72
SLC44A3Q8N4M1 AC012468.1-201ENST00000604888 430 ntBASIC4.3□□□□□ -1.72
SLC44A3Q8N4M1 AL136363.1-201ENST00000605349 337 ntBASIC4.3□□□□□ -1.72
SLC44A3Q8N4M1 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.3□□□□□ -1.72
SLC44A3Q8N4M1 AL161734.1-201ENST00000609720 557 ntBASIC4.3□□□□□ -1.72
SLC44A3Q8N4M1 AC112204.3-201ENST00000623822 332 ntBASIC4.3□□□□□ -1.72
SLC44A3Q8N4M1 VPS8-228ENST00000628962 207 ntTSL 5 BASIC4.3□□□□□ -1.72
SLC44A3Q8N4M1 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.3□□□□□ -1.72
SLC44A3Q8N4M1 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.3□□□□□ -1.72
SLC44A3Q8N4M1 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SLC44A3Q8N4M1 AC093535.2-201ENST00000624769 2326 ntBASIC4.3□□□□□ -1.72
SLC44A3Q8N4M1 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SLC44A3Q8N4M1 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.3□□□□□ -1.72
SLC44A3Q8N4M1 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SLC44A3Q8N4M1 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
SLC44A3Q8N4M1 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SLC44A3Q8N4M1 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
SLC44A3Q8N4M1 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
SLC44A3Q8N4M1 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SLC44A3Q8N4M1 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SLC44A3Q8N4M1 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SLC44A3Q8N4M1 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SLC44A3Q8N4M1 RNU6-845P-201ENST00000362578 103 ntBASIC4.29□□□□□ -1.72
SLC44A3Q8N4M1 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.29□□□□□ -1.72
SLC44A3Q8N4M1 Y_RNA.166-201ENST00000363730 102 ntBASIC4.29□□□□□ -1.72
SLC44A3Q8N4M1 Y_RNA.381-201ENST00000365666 102 ntBASIC4.29□□□□□ -1.72
SLC44A3Q8N4M1 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
SLC44A3Q8N4M1 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
SLC44A3Q8N4M1 RNU6-213P-201ENST00000384051 104 ntBASIC4.29□□□□□ -1.72
SLC44A3Q8N4M1 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.29□□□□□ -1.72
SLC44A3Q8N4M1 AC016769.3-201ENST00000396562 315 ntBASIC4.29□□□□□ -1.72
SLC44A3Q8N4M1 MIR921-201ENST00000401133 56 ntBASIC4.29□□□□□ -1.72
SLC44A3Q8N4M1 RNU2-8P-201ENST00000410727 190 ntBASIC4.29□□□□□ -1.72
SLC44A3Q8N4M1 AC127391.1-201ENST00000411737 98 ntBASIC4.29□□□□□ -1.72
SLC44A3Q8N4M1 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.29□□□□□ -1.72
SLC44A3Q8N4M1 SEPT14P3-201ENST00000439401 183 ntBASIC4.29□□□□□ -1.72
SLC44A3Q8N4M1 AL732372.2-207ENST00000445840 183 ntBASIC4.29□□□□□ -1.72
SLC44A3Q8N4M1 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC4.29□□□□□ -1.72
SLC44A3Q8N4M1 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.29□□□□□ -1.72
SLC44A3Q8N4M1 SEPT14P2-201ENST00000453405 183 ntBASIC4.29□□□□□ -1.72
SLC44A3Q8N4M1 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.29□□□□□ -1.72
SLC44A3Q8N4M1 FAM172BP-201ENST00000487497 1089 ntBASIC4.29□□□□□ -1.72
SLC44A3Q8N4M1 SEPT14P4-201ENST00000513445 186 ntBASIC4.29□□□□□ -1.72
SLC44A3Q8N4M1 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.29□□□□□ -1.72
SLC44A3Q8N4M1 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.29□□□□□ -1.72
SLC44A3Q8N4M1 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.29□□□□□ -1.72
SLC44A3Q8N4M1 FO082796.1-201ENST00000523795 183 ntBASIC4.29□□□□□ -1.72
SLC44A3Q8N4M1 ZNF705CP-201ENST00000530515 889 ntBASIC4.29□□□□□ -1.72
SLC44A3Q8N4M1 OR5B19P-201ENST00000531766 928 ntBASIC4.29□□□□□ -1.72
SLC44A3Q8N4M1 AC006064.5-201ENST00000541782 248 ntBASIC4.29□□□□□ -1.72
SLC44A3Q8N4M1 AC125611.2-201ENST00000551907 647 ntBASIC4.29□□□□□ -1.72
SLC44A3Q8N4M1 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC4.29□□□□□ -1.72
SLC44A3Q8N4M1 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.29□□□□□ -1.72
SLC44A3Q8N4M1 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.29□□□□□ -1.72
SLC44A3Q8N4M1 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.29□□□□□ -1.72
SLC44A3Q8N4M1 AC022655.2-201ENST00000577280 318 ntBASIC4.29□□□□□ -1.72
SLC44A3Q8N4M1 MIR3118-1-201ENST00000581787 76 ntBASIC4.29□□□□□ -1.72
SLC44A3Q8N4M1 AC018638.8-201ENST00000588755 281 ntBASIC4.29□□□□□ -1.72
SLC44A3Q8N4M1 AC022432.1-201ENST00000595739 310 ntBASIC4.29□□□□□ -1.72
SLC44A3Q8N4M1 BBIP1P1-201ENST00000602999 279 ntBASIC4.29□□□□□ -1.72
SLC44A3Q8N4M1 AL050343.2-201ENST00000607338 280 ntBASIC4.29□□□□□ -1.72
SLC44A3Q8N4M1 AL391813.2-201ENST00000609113 322 ntBASIC4.29□□□□□ -1.72
SLC44A3Q8N4M1 AL132765.2-201ENST00000610812 351 ntBASIC4.29□□□□□ -1.72
SLC44A3Q8N4M1 AL133173.2-201ENST00000614270 90 ntBASIC4.29□□□□□ -1.72
SLC44A3Q8N4M1 MIR7151-201ENST00000617477 60 ntBASIC4.29□□□□□ -1.72
SLC44A3Q8N4M1 AC005086.4-201ENST00000623065 213 ntBASIC4.29□□□□□ -1.72
SLC44A3Q8N4M1 AC019278.1-201ENST00000623516 479 ntBASIC4.29□□□□□ -1.72
SLC44A3Q8N4M1 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SLC44A3Q8N4M1 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SLC44A3Q8N4M1 NMD3P1-201ENST00000439704 1488 ntBASIC4.29□□□□□ -1.72
SLC44A3Q8N4M1 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms