Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 RPL21P11-201ENST00000461458 483 ntBASIC5.57□□□□□ -1.52
CCDC116Q8IYX3 RPL21P39-201ENST00000463605 483 ntBASIC5.57□□□□□ -1.52
CCDC116Q8IYX3 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC5.57□□□□□ -1.52
CCDC116Q8IYX3 MRPL42P6-201ENST00000486397 371 ntBASIC5.57□□□□□ -1.52
CCDC116Q8IYX3 AC132942.1-201ENST00000486753 483 ntBASIC5.57□□□□□ -1.52
CCDC116Q8IYX3 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.57□□□□□ -1.52
CCDC116Q8IYX3 AC093591.1-201ENST00000491435 481 ntBASIC5.57□□□□□ -1.52
CCDC116Q8IYX3 RPL21P16-201ENST00000495531 483 ntBASIC5.57□□□□□ -1.52
CCDC116Q8IYX3 RPS27AP13-201ENST00000498403 237 ntBASIC5.57□□□□□ -1.52
CCDC116Q8IYX3 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC5.57□□□□□ -1.52
CCDC116Q8IYX3 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC116Q8IYX3 MIR2117-201ENST00000516780 80 ntBASIC5.57□□□□□ -1.52
CCDC116Q8IYX3 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC5.57□□□□□ -1.52
CCDC116Q8IYX3 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC5.57□□□□□ -1.52
CCDC116Q8IYX3 AC022884.2-201ENST00000578535 580 ntBASIC5.57□□□□□ -1.52
CCDC116Q8IYX3 AL355812.1-201ENST00000603215 216 ntBASIC5.57□□□□□ -1.52
CCDC116Q8IYX3 AC006077.1-201ENST00000604746 343 ntBASIC5.57□□□□□ -1.52
CCDC116Q8IYX3 Y_RNA.772-201ENST00000606692 102 ntBASIC5.57□□□□□ -1.52
CCDC116Q8IYX3 AL591926.1-201ENST00000620542 217 ntBASIC5.57□□□□□ -1.52
CCDC116Q8IYX3 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.57□□□□□ -1.52
CCDC116Q8IYX3 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.57□□□□□ -1.52
CCDC116Q8IYX3 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC116Q8IYX3 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
CCDC116Q8IYX3 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC116Q8IYX3 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC116Q8IYX3 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC116Q8IYX3 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
CCDC116Q8IYX3 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.57□□□□□ -1.52
CCDC116Q8IYX3 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC116Q8IYX3 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.56□□□□□ -1.52
CCDC116Q8IYX3 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC116Q8IYX3 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.56□□□□□ -1.52
CCDC116Q8IYX3 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC116Q8IYX3 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
CCDC116Q8IYX3 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
CCDC116Q8IYX3 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC116Q8IYX3 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC116Q8IYX3 COX6B1P3-201ENST00000312310 260 ntBASIC5.56□□□□□ -1.52
CCDC116Q8IYX3 SELENOWP1-201ENST00000322792 252 ntBASIC5.56□□□□□ -1.52
CCDC116Q8IYX3 SNORD113-8-201ENST00000363497 74 ntBASIC5.56□□□□□ -1.52
CCDC116Q8IYX3 AC019155.1-201ENST00000382242 574 ntBASIC5.56□□□□□ -1.52
CCDC116Q8IYX3 RNU6-821P-201ENST00000390995 107 ntBASIC5.56□□□□□ -1.52
CCDC116Q8IYX3 CYB5AP4-201ENST00000396692 399 ntBASIC5.56□□□□□ -1.52
CCDC116Q8IYX3 RNA5SP431-201ENST00000410312 120 ntBASIC5.56□□□□□ -1.52
CCDC116Q8IYX3 RN7SKP51-201ENST00000410781 304 ntBASIC5.56□□□□□ -1.52
CCDC116Q8IYX3 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.56□□□□□ -1.52
CCDC116Q8IYX3 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC5.56□□□□□ -1.52
CCDC116Q8IYX3 RPS12P17-201ENST00000438591 377 ntBASIC5.56□□□□□ -1.52
CCDC116Q8IYX3 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC5.56□□□□□ -1.52
CCDC116Q8IYX3 COX6CP14-201ENST00000469580 174 ntBASIC5.56□□□□□ -1.52
CCDC116Q8IYX3 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.56□□□□□ -1.52
CCDC116Q8IYX3 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC116Q8IYX3 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.56□□□□□ -1.52
CCDC116Q8IYX3 MRPS33P2-201ENST00000507850 322 ntBASIC5.56□□□□□ -1.52
CCDC116Q8IYX3 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.56□□□□□ -1.52
CCDC116Q8IYX3 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC116Q8IYX3 OR4H12P-201ENST00000556269 907 ntBASIC5.56□□□□□ -1.52
CCDC116Q8IYX3 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.56□□□□□ -1.52
CCDC116Q8IYX3 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.56□□□□□ -1.52
CCDC116Q8IYX3 AC026826.3-201ENST00000561747 158 ntBASIC5.56□□□□□ -1.52
CCDC116Q8IYX3 AC008507.3-201ENST00000585753 472 ntBASIC5.56□□□□□ -1.52
CCDC116Q8IYX3 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.56□□□□□ -1.52
CCDC116Q8IYX3 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC5.56□□□□□ -1.52
CCDC116Q8IYX3 AC123786.2-201ENST00000603459 275 ntBASIC5.56□□□□□ -1.52
CCDC116Q8IYX3 AL078605.1-201ENST00000603529 500 ntBASIC5.56□□□□□ -1.52
CCDC116Q8IYX3 MIR7109-201ENST00000613748 65 ntBASIC5.56□□□□□ -1.52
CCDC116Q8IYX3 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.56□□□□□ -1.52
CCDC116Q8IYX3 AC245014.3-201ENST00000618589 347 ntBASIC5.56□□□□□ -1.52
CCDC116Q8IYX3 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC116Q8IYX3 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC116Q8IYX3 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
CCDC116Q8IYX3 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.56□□□□□ -1.52
CCDC116Q8IYX3 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC116Q8IYX3 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC116Q8IYX3 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.56□□□□□ -1.52
CCDC116Q8IYX3 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC116Q8IYX3 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC116Q8IYX3 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC116Q8IYX3 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC116Q8IYX3 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC116Q8IYX3 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
CCDC116Q8IYX3 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.55□□□□□ -1.52
CCDC116Q8IYX3 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
CCDC116Q8IYX3 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC116Q8IYX3 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC116Q8IYX3 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
CCDC116Q8IYX3 AC015799.1-201ENST00000622996 3122 ntBASIC5.55□□□□□ -1.52
CCDC116Q8IYX3 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.55□□□□□ -1.52
CCDC116Q8IYX3 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.55□□□□□ -1.52
CCDC116Q8IYX3 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC116Q8IYX3 Y_RNA.358-201ENST00000365491 99 ntBASIC5.55□□□□□ -1.52
CCDC116Q8IYX3 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC116Q8IYX3 RNU6-804P-201ENST00000384286 107 ntBASIC5.55□□□□□ -1.52
CCDC116Q8IYX3 RNU6-102P-201ENST00000384485 104 ntBASIC5.55□□□□□ -1.52
CCDC116Q8IYX3 MIR135A2-201ENST00000384854 100 ntBASIC5.55□□□□□ -1.52
CCDC116Q8IYX3 MT-TC-201ENST00000387405 66 ntBASIC5.55□□□□□ -1.52
CCDC116Q8IYX3 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC5.55□□□□□ -1.52
CCDC116Q8IYX3 HMGB1P27-201ENST00000431429 603 ntBASIC5.55□□□□□ -1.52
CCDC116Q8IYX3 AC007679.3-201ENST00000434035 414 ntBASIC5.55□□□□□ -1.52
CCDC116Q8IYX3 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms