Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.11□□□□□ -2.07
DDX60Q8IY21 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.11□□□□□ -2.07
DDX60Q8IY21 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
DDX60Q8IY21 MIR337-201ENST00000362281 93 ntBASIC2.11□□□□□ -2.07
DDX60Q8IY21 RNU4-52P-201ENST00000384209 138 ntBASIC2.11□□□□□ -2.07
DDX60Q8IY21 AL121972.1-201ENST00000402023 252 ntBASIC2.11□□□□□ -2.07
DDX60Q8IY21 MTND2P16-201ENST00000419987 799 ntBASIC2.11□□□□□ -2.07
DDX60Q8IY21 AMD1P1-201ENST00000457220 922 ntBASIC2.11□□□□□ -2.07
DDX60Q8IY21 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.11□□□□□ -2.07
DDX60Q8IY21 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC2.11□□□□□ -2.07
DDX60Q8IY21 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.11□□□□□ -2.07
DDX60Q8IY21 AC011468.4-201ENST00000603942 409 ntBASIC2.11□□□□□ -2.07
DDX60Q8IY21 AL035411.2-201ENST00000604022 421 ntBASIC2.11□□□□□ -2.07
DDX60Q8IY21 APOOP1-201ENST00000604695 592 ntBASIC2.11□□□□□ -2.07
DDX60Q8IY21 AL109809.4-201ENST00000603520 2185 ntBASIC2.1□□□□□ -2.07
DDX60Q8IY21 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
DDX60Q8IY21 RNU4-13P-201ENST00000364019 141 ntBASIC2.1□□□□□ -2.07
DDX60Q8IY21 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.1□□□□□ -2.07
DDX60Q8IY21 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
DDX60Q8IY21 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC2.1□□□□□ -2.07
DDX60Q8IY21 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.1□□□□□ -2.07
DDX60Q8IY21 MTCYBP17-201ENST00000503579 789 ntBASIC2.1□□□□□ -2.07
DDX60Q8IY21 MYL12BP1-201ENST00000569826 507 ntBASIC2.1□□□□□ -2.07
DDX60Q8IY21 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.1□□□□□ -2.07
DDX60Q8IY21 AL139276.1-201ENST00000311910 1001 ntBASIC2.09□□□□□ -2.07
DDX60Q8IY21 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
DDX60Q8IY21 SNORD48-201ENST00000364953 64 ntBASIC2.09□□□□□ -2.07
DDX60Q8IY21 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
DDX60Q8IY21 RNA5SP489-201ENST00000410986 109 ntBASIC2.09□□□□□ -2.07
DDX60Q8IY21 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC2.09□□□□□ -2.07
DDX60Q8IY21 AL353597.2-202ENST00000434901 373 ntBASIC2.09□□□□□ -2.07
DDX60Q8IY21 AL138799.3-201ENST00000438968 350 ntBASIC2.09□□□□□ -2.07
DDX60Q8IY21 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.09□□□□□ -2.07
DDX60Q8IY21 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.09□□□□□ -2.07
DDX60Q8IY21 AC117532.1-201ENST00000514638 323 ntBASIC2.09□□□□□ -2.07
DDX60Q8IY21 Y_RNA.670-201ENST00000516255 105 ntBASIC2.09□□□□□ -2.07
DDX60Q8IY21 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC2.09□□□□□ -2.07
DDX60Q8IY21 AC121758.2-201ENST00000553271 193 ntBASIC2.09□□□□□ -2.07
DDX60Q8IY21 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.09□□□□□ -2.07
DDX60Q8IY21 ACTR3BP3-201ENST00000565577 979 ntBASIC2.09□□□□□ -2.07
DDX60Q8IY21 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.09□□□□□ -2.07
DDX60Q8IY21 AC103987.3-201ENST00000582071 292 ntBASIC2.09□□□□□ -2.07
DDX60Q8IY21 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.09□□□□□ -2.07
DDX60Q8IY21 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
DDX60Q8IY21 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.09□□□□□ -2.08
DDX60Q8IY21 Y_RNA.355-201ENST00000365462 98 ntBASIC2.08□□□□□ -2.08
DDX60Q8IY21 TAS2R15P-201ENST00000390674 928 ntBASIC2.08□□□□□ -2.08
DDX60Q8IY21 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.08□□□□□ -2.08
DDX60Q8IY21 PSMA2P3-201ENST00000429685 675 ntBASIC2.08□□□□□ -2.08
DDX60Q8IY21 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.08□□□□□ -2.08
DDX60Q8IY21 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.08□□□□□ -2.08
DDX60Q8IY21 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.08□□□□□ -2.08
DDX60Q8IY21 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.08□□□□□ -2.08
DDX60Q8IY21 CD24P2-201ENST00000565486 219 ntBASIC2.08□□□□□ -2.08
DDX60Q8IY21 AP001029.3-201ENST00000588063 596 ntBASIC2.08□□□□□ -2.08
DDX60Q8IY21 AC091046.2-201ENST00000620775 665 ntBASIC2.08□□□□□ -2.08
DDX60Q8IY21 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
DDX60Q8IY21 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
DDX60Q8IY21 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.08□□□□□ -2.08
DDX60Q8IY21 SNORA16.1-201ENST00000364597 132 ntBASIC2.08□□□□□ -2.08
DDX60Q8IY21 AP000275.1-201ENST00000411943 390 ntBASIC2.08□□□□□ -2.08
DDX60Q8IY21 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.08□□□□□ -2.08
DDX60Q8IY21 SNRPFP4-201ENST00000456366 242 ntBASIC2.08□□□□□ -2.08
DDX60Q8IY21 AC135999.1-201ENST00000478962 479 ntBASIC2.08□□□□□ -2.08
DDX60Q8IY21 AC079203.1-201ENST00000487972 404 ntBASIC2.08□□□□□ -2.08
DDX60Q8IY21 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC2.08□□□□□ -2.08
DDX60Q8IY21 RNU6-56P-201ENST00000516986 93 ntBASIC2.08□□□□□ -2.08
DDX60Q8IY21 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.08□□□□□ -2.08
DDX60Q8IY21 SETP2-201ENST00000553886 926 ntBASIC2.08□□□□□ -2.08
DDX60Q8IY21 DUXAP9-208ENST00000622815 614 ntBASIC2.08□□□□□ -2.08
DDX60Q8IY21 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
DDX60Q8IY21 AC109780.2-201ENST00000413467 845 ntBASIC2.07□□□□□ -2.08
DDX60Q8IY21 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC2.07□□□□□ -2.08
DDX60Q8IY21 MTCYBP37-201ENST00000510642 1133 ntBASIC2.07□□□□□ -2.08
DDX60Q8IY21 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.07□□□□□ -2.08
DDX60Q8IY21 AC007115.1-201ENST00000546853 234 ntBASIC2.07□□□□□ -2.08
DDX60Q8IY21 AL645939.4-201ENST00000604495 135 ntBASIC2.07□□□□□ -2.08
DDX60Q8IY21 MIR499A-201ENST00000384903 122 ntBASIC2.06□□□□□ -2.08
DDX60Q8IY21 AC114973.1-201ENST00000429057 632 ntBASIC2.06□□□□□ -2.08
DDX60Q8IY21 SUMO1P4-201ENST00000429430 302 ntBASIC2.06□□□□□ -2.08
DDX60Q8IY21 TRIM60P18-201ENST00000441518 828 ntBASIC2.06□□□□□ -2.08
DDX60Q8IY21 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.06□□□□□ -2.08
DDX60Q8IY21 ZNF192P1-203ENST00000565888 810 ntBASIC2.06□□□□□ -2.08
DDX60Q8IY21 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.06□□□□□ -2.08
DDX60Q8IY21 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.06□□□□□ -2.08
DDX60Q8IY21 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.06□□□□□ -2.08
DDX60Q8IY21 MIR4278-201ENST00000636094 69 ntBASIC2.06□□□□□ -2.08
DDX60Q8IY21 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.06□□□□□ -2.08
DDX60Q8IY21 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
DDX60Q8IY21 Y_RNA.540-201ENST00000384638 111 ntBASIC2.05□□□□□ -2.08
DDX60Q8IY21 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
DDX60Q8IY21 AC092832.1-201ENST00000422934 400 ntBASIC2.05□□□□□ -2.08
DDX60Q8IY21 AC092473.1-201ENST00000441098 221 ntBASIC2.05□□□□□ -2.08
DDX60Q8IY21 AC104308.1-201ENST00000454621 333 ntBASIC2.05□□□□□ -2.08
DDX60Q8IY21 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.05□□□□□ -2.08
DDX60Q8IY21 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.05□□□□□ -2.08
DDX60Q8IY21 AC068781.1-201ENST00000488231 618 ntBASIC2.05□□□□□ -2.08
DDX60Q8IY21 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.05□□□□□ -2.08
DDX60Q8IY21 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.05□□□□□ -2.08
DDX60Q8IY21 AC013444.2-201ENST00000603317 787 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms