Protein–RNA interactions for Protein: Q8IX90

SKA3, Spindle and kinetochore-associated protein 3, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3Q8IX90 AC092106.3-201ENST00000611308 722 ntBASIC2.83□□□□□ -1.96
SKA3Q8IX90 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.83□□□□□ -1.96
SKA3Q8IX90 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SKA3Q8IX90 AF117829.1-206ENST00000621883 3802 ntBASIC2.82□□□□□ -1.96
SKA3Q8IX90 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SKA3Q8IX90 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
SKA3Q8IX90 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SKA3Q8IX90 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SKA3Q8IX90 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SKA3Q8IX90 SNORA63.1-201ENST00000362493 131 ntBASIC2.82□□□□□ -1.96
SKA3Q8IX90 RNU6-1074P-201ENST00000383995 104 ntBASIC2.82□□□□□ -1.96
SKA3Q8IX90 RNU6-83P-201ENST00000384568 112 ntBASIC2.82□□□□□ -1.96
SKA3Q8IX90 RNA5SP120-201ENST00000410900 112 ntBASIC2.82□□□□□ -1.96
SKA3Q8IX90 AC099677.1-201ENST00000420575 175 ntBASIC2.82□□□□□ -1.96
SKA3Q8IX90 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.82□□□□□ -1.96
SKA3Q8IX90 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.82□□□□□ -1.96
SKA3Q8IX90 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.82□□□□□ -1.96
SKA3Q8IX90 AL139281.1-201ENST00000422120 335 ntBASIC2.82□□□□□ -1.96
SKA3Q8IX90 AL158156.1-201ENST00000422509 473 ntBASIC2.82□□□□□ -1.96
SKA3Q8IX90 AC007742.1-201ENST00000425789 329 ntBASIC2.82□□□□□ -1.96
SKA3Q8IX90 RPL21P40-201ENST00000428586 483 ntBASIC2.82□□□□□ -1.96
SKA3Q8IX90 ELOCP26-201ENST00000436067 329 ntBASIC2.82□□□□□ -1.96
SKA3Q8IX90 MTND3P1-201ENST00000441336 220 ntBASIC2.82□□□□□ -1.96
SKA3Q8IX90 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.82□□□□□ -1.96
SKA3Q8IX90 AC115115.1-201ENST00000449927 248 ntBASIC2.82□□□□□ -1.96
SKA3Q8IX90 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.82□□□□□ -1.96
SKA3Q8IX90 HMGB1P15-201ENST00000453854 435 ntBASIC2.82□□□□□ -1.96
SKA3Q8IX90 AL590639.1-201ENST00000456484 337 ntBASIC2.82□□□□□ -1.96
SKA3Q8IX90 SNORD11.1-201ENST00000459482 85 ntBASIC2.82□□□□□ -1.96
SKA3Q8IX90 RN7SL75P-201ENST00000461926 281 ntBASIC2.82□□□□□ -1.96
SKA3Q8IX90 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.82□□□□□ -1.96
SKA3Q8IX90 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.82□□□□□ -1.96
SKA3Q8IX90 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC2.82□□□□□ -1.96
SKA3Q8IX90 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SKA3Q8IX90 RN7SL499P-201ENST00000481141 276 ntBASIC2.82□□□□□ -1.96
SKA3Q8IX90 RPL32P34-201ENST00000486380 400 ntBASIC2.82□□□□□ -1.96
SKA3Q8IX90 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC2.82□□□□□ -1.96
SKA3Q8IX90 AC110794.1-201ENST00000505816 425 ntBASIC2.82□□□□□ -1.96
SKA3Q8IX90 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.82□□□□□ -1.96
SKA3Q8IX90 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.82□□□□□ -1.96
SKA3Q8IX90 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.82□□□□□ -1.96
SKA3Q8IX90 RNU6-150P-201ENST00000516237 95 ntBASIC2.82□□□□□ -1.96
SKA3Q8IX90 DEFB131D-201ENST00000526803 184 ntBASIC2.82□□□□□ -1.96
SKA3Q8IX90 MTCO2P15-201ENST00000532655 656 ntBASIC2.82□□□□□ -1.96
SKA3Q8IX90 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SKA3Q8IX90 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.82□□□□□ -1.96
SKA3Q8IX90 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.82□□□□□ -1.96
SKA3Q8IX90 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC2.82□□□□□ -1.96
SKA3Q8IX90 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.82□□□□□ -1.96
SKA3Q8IX90 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC2.82□□□□□ -1.96
SKA3Q8IX90 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.82□□□□□ -1.96
SKA3Q8IX90 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC2.82□□□□□ -1.96
SKA3Q8IX90 MIR2682-201ENST00000580305 110 ntBASIC2.82□□□□□ -1.96
SKA3Q8IX90 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SKA3Q8IX90 SNORD84-203ENST00000584275 78 ntBASIC2.82□□□□□ -1.96
SKA3Q8IX90 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.82□□□□□ -1.96
SKA3Q8IX90 VN1R78P-201ENST00000597393 564 ntBASIC2.82□□□□□ -1.96
SKA3Q8IX90 AL158042.1-201ENST00000605338 460 ntBASIC2.82□□□□□ -1.96
SKA3Q8IX90 AC069234.5-201ENST00000611056 416 ntBASIC2.82□□□□□ -1.96
SKA3Q8IX90 AC131902.3-201ENST00000611767 581 ntBASIC2.82□□□□□ -1.96
SKA3Q8IX90 AP000484.1-201ENST00000620067 1252 ntBASIC2.82□□□□□ -1.96
SKA3Q8IX90 AL353748.2-201ENST00000622148 471 ntBASIC2.82□□□□□ -1.96
SKA3Q8IX90 AC004777.1-201ENST00000624317 287 ntBASIC2.82□□□□□ -1.96
SKA3Q8IX90 AC091903.1-201ENST00000624322 454 ntBASIC2.82□□□□□ -1.96
SKA3Q8IX90 AC006927.4-201ENST00000639187 543 ntBASIC2.82□□□□□ -1.96
SKA3Q8IX90 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SKA3Q8IX90 AL079343.1-201ENST00000572358 1771 ntBASIC2.82□□□□□ -1.96
SKA3Q8IX90 AC093010.3-201ENST00000570269 15214 ntBASIC2.82□□□□□ -1.96
SKA3Q8IX90 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SKA3Q8IX90 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.81□□□□□ -1.96
SKA3Q8IX90 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
SKA3Q8IX90 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SKA3Q8IX90 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SKA3Q8IX90 U3.6-201ENST00000363622 211 ntBASIC2.81□□□□□ -1.96
SKA3Q8IX90 DEFB109C-201ENST00000382575 264 ntBASIC2.81□□□□□ -1.96
SKA3Q8IX90 DEFB109B-201ENST00000382656 264 ntBASIC2.81□□□□□ -1.96
SKA3Q8IX90 AL031679.1-201ENST00000400616 525 ntBASIC2.81□□□□□ -1.96
SKA3Q8IX90 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.81□□□□□ -1.96
SKA3Q8IX90 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.81□□□□□ -1.96
SKA3Q8IX90 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC2.81□□□□□ -1.96
SKA3Q8IX90 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.81□□□□□ -1.96
SKA3Q8IX90 RPL7P30-201ENST00000420888 709 ntBASIC2.81□□□□□ -1.96
SKA3Q8IX90 AC091862.1-201ENST00000438016 1100 ntBASIC2.81□□□□□ -1.96
SKA3Q8IX90 MUPP-201ENST00000438111 566 ntBASIC2.81□□□□□ -1.96
SKA3Q8IX90 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
SKA3Q8IX90 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.81□□□□□ -1.96
SKA3Q8IX90 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.81□□□□□ -1.96
SKA3Q8IX90 ARPC3P5-201ENST00000448802 534 ntBASIC2.81□□□□□ -1.96
SKA3Q8IX90 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.81□□□□□ -1.96
SKA3Q8IX90 snoU13.4-201ENST00000458916 104 ntBASIC2.81□□□□□ -1.96
SKA3Q8IX90 AP001992.1-205ENST00000462248 379 ntBASIC2.81□□□□□ -1.96
SKA3Q8IX90 RN7SL601P-201ENST00000471221 293 ntBASIC2.81□□□□□ -1.96
SKA3Q8IX90 ST13P14-201ENST00000474095 734 ntBASIC2.81□□□□□ -1.96
SKA3Q8IX90 RPL7P18-201ENST00000478965 734 ntBASIC2.81□□□□□ -1.96
SKA3Q8IX90 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.81□□□□□ -1.96
SKA3Q8IX90 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.81□□□□□ -1.96
SKA3Q8IX90 COX7A2P2-201ENST00000505291 250 ntBASIC2.81□□□□□ -1.96
SKA3Q8IX90 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.81□□□□□ -1.96
SKA3Q8IX90 SLC25A15P5-201ENST00000508033 253 ntBASIC2.81□□□□□ -1.96
SKA3Q8IX90 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms