Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SCUBE3Q8IX30 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SCUBE3Q8IX30 SAGE4P-201ENST00000442271 3381 ntBASIC6.08□□□□□ -1.44
SCUBE3Q8IX30 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SCUBE3Q8IX30 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SCUBE3Q8IX30 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SCUBE3Q8IX30 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SCUBE3Q8IX30 AC097063.1-201ENST00000426714 1797 ntBASIC6.08□□□□□ -1.44
SCUBE3Q8IX30 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SCUBE3Q8IX30 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SCUBE3Q8IX30 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SCUBE3Q8IX30 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
SCUBE3Q8IX30 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SCUBE3Q8IX30 AC000374.1-201ENST00000434698 1745 ntBASIC6.08□□□□□ -1.44
SCUBE3Q8IX30 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SCUBE3Q8IX30 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SCUBE3Q8IX30 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.07□□□□□ -1.44
SCUBE3Q8IX30 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
SCUBE3Q8IX30 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SCUBE3Q8IX30 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
SCUBE3Q8IX30 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SCUBE3Q8IX30 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.07□□□□□ -1.44
SCUBE3Q8IX30 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SCUBE3Q8IX30 AC020656.2-201ENST00000613291 5309 ntBASIC6.07□□□□□ -1.44
SCUBE3Q8IX30 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
SCUBE3Q8IX30 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
SCUBE3Q8IX30 SNORA74A-201ENST00000364089 198 ntBASIC6.07□□□□□ -1.44
SCUBE3Q8IX30 RNU6-290P-201ENST00000365212 101 ntBASIC6.07□□□□□ -1.44
SCUBE3Q8IX30 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SCUBE3Q8IX30 Y_RNA.418-201ENST00000384029 102 ntBASIC6.07□□□□□ -1.44
SCUBE3Q8IX30 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.07□□□□□ -1.44
SCUBE3Q8IX30 MTCYBP2-201ENST00000407745 171 ntBASIC6.07□□□□□ -1.44
SCUBE3Q8IX30 U3.35-201ENST00000408405 208 ntBASIC6.07□□□□□ -1.44
SCUBE3Q8IX30 RNU2-21P-201ENST00000410368 188 ntBASIC6.07□□□□□ -1.44
SCUBE3Q8IX30 RNU6-1135P-201ENST00000411083 103 ntBASIC6.07□□□□□ -1.44
SCUBE3Q8IX30 RNU2-22P-201ENST00000411266 212 ntBASIC6.07□□□□□ -1.44
SCUBE3Q8IX30 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC6.07□□□□□ -1.44
SCUBE3Q8IX30 AC099677.1-201ENST00000420575 175 ntBASIC6.07□□□□□ -1.44
SCUBE3Q8IX30 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC6.07□□□□□ -1.44
SCUBE3Q8IX30 AL133445.1-201ENST00000467051 452 ntBASIC6.07□□□□□ -1.44
SCUBE3Q8IX30 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC6.07□□□□□ -1.44
SCUBE3Q8IX30 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.07□□□□□ -1.44
SCUBE3Q8IX30 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.07□□□□□ -1.44
SCUBE3Q8IX30 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.07□□□□□ -1.44
SCUBE3Q8IX30 AC027288.2-201ENST00000553028 243 ntBASIC6.07□□□□□ -1.44
SCUBE3Q8IX30 HMGN2P47-201ENST00000559378 272 ntBASIC6.07□□□□□ -1.44
SCUBE3Q8IX30 AC018552.1-201ENST00000562099 811 ntBASIC6.07□□□□□ -1.44
SCUBE3Q8IX30 MIR4260-201ENST00000583107 67 ntBASIC6.07□□□□□ -1.44
SCUBE3Q8IX30 AC108706.1-201ENST00000611053 297 ntBASIC6.07□□□□□ -1.44
SCUBE3Q8IX30 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC6.07□□□□□ -1.44
SCUBE3Q8IX30 AC097372.5-201ENST00000623665 376 ntBASIC6.07□□□□□ -1.44
SCUBE3Q8IX30 AP000550.3-201ENST00000637734 379 ntBASIC6.07□□□□□ -1.44
SCUBE3Q8IX30 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC6.07□□□□□ -1.44
SCUBE3Q8IX30 SDAD1P2-201ENST00000441308 2028 ntBASIC6.07□□□□□ -1.44
SCUBE3Q8IX30 AC007842.1-201ENST00000597336 2039 ntBASIC6.07□□□□□ -1.44
SCUBE3Q8IX30 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.07□□□□□ -1.44
SCUBE3Q8IX30 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
SCUBE3Q8IX30 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SCUBE3Q8IX30 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.07□□□□□ -1.44
SCUBE3Q8IX30 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SCUBE3Q8IX30 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SCUBE3Q8IX30 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
SCUBE3Q8IX30 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.07□□□□□ -1.44
SCUBE3Q8IX30 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SCUBE3Q8IX30 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
SCUBE3Q8IX30 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SCUBE3Q8IX30 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.06□□□□□ -1.44
SCUBE3Q8IX30 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SCUBE3Q8IX30 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SCUBE3Q8IX30 AC008725.1-201ENST00000605123 2263 ntBASIC6.06□□□□□ -1.44
SCUBE3Q8IX30 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SCUBE3Q8IX30 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
SCUBE3Q8IX30 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SCUBE3Q8IX30 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SCUBE3Q8IX30 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.06□□□□□ -1.44
SCUBE3Q8IX30 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
SCUBE3Q8IX30 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
SCUBE3Q8IX30 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
SCUBE3Q8IX30 AL159987.1-201ENST00000347911 293 ntBASIC6.06□□□□□ -1.44
SCUBE3Q8IX30 Y_RNA.324-201ENST00000365165 102 ntBASIC6.06□□□□□ -1.44
SCUBE3Q8IX30 RN7SKP186-201ENST00000365371 303 ntBASIC6.06□□□□□ -1.44
SCUBE3Q8IX30 Y_RNA.358-201ENST00000365491 99 ntBASIC6.06□□□□□ -1.44
SCUBE3Q8IX30 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SCUBE3Q8IX30 RNY3P4-201ENST00000384428 101 ntBASIC6.06□□□□□ -1.44
SCUBE3Q8IX30 MIR521-1-201ENST00000384902 87 ntBASIC6.06□□□□□ -1.44
SCUBE3Q8IX30 AL079342.1-201ENST00000401460 267 ntBASIC6.06□□□□□ -1.44
SCUBE3Q8IX30 AC093655.2-201ENST00000425735 631 ntBASIC6.06□□□□□ -1.44
SCUBE3Q8IX30 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC6.06□□□□□ -1.44
SCUBE3Q8IX30 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC6.06□□□□□ -1.44
SCUBE3Q8IX30 AL360271.2-201ENST00000447710 161 ntBASIC6.06□□□□□ -1.44
SCUBE3Q8IX30 RPS11P1-201ENST00000451072 473 ntBASIC6.06□□□□□ -1.44
SCUBE3Q8IX30 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC6.06□□□□□ -1.44
SCUBE3Q8IX30 RPL32P33-201ENST00000487023 394 ntBASIC6.06□□□□□ -1.44
SCUBE3Q8IX30 AC022133.1-201ENST00000490961 571 ntBASIC6.06□□□□□ -1.44
SCUBE3Q8IX30 SNORD116-28-201ENST00000516123 91 ntBASIC6.06□□□□□ -1.44
SCUBE3Q8IX30 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SCUBE3Q8IX30 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.06□□□□□ -1.44
SCUBE3Q8IX30 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC6.06□□□□□ -1.44
SCUBE3Q8IX30 RN7SL652P-201ENST00000577769 300 ntBASIC6.06□□□□□ -1.44
SCUBE3Q8IX30 AL162424.1-201ENST00000602325 221 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms