Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AC008013.2-202ENST00000637965 364 ntBASIC4.22□□□□□ -1.73
VRK3Q8IV63 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
VRK3Q8IV63 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
VRK3Q8IV63 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.22□□□□□ -1.73
VRK3Q8IV63 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
VRK3Q8IV63 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.22□□□□□ -1.73
VRK3Q8IV63 AC092125.1-201ENST00000562568 1995 ntBASIC4.22□□□□□ -1.73
VRK3Q8IV63 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.73
VRK3Q8IV63 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
VRK3Q8IV63 AL118496.1-201ENST00000440201 1812 ntBASIC4.21□□□□□ -1.74
VRK3Q8IV63 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.21□□□□□ -1.74
VRK3Q8IV63 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
VRK3Q8IV63 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
VRK3Q8IV63 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.21□□□□□ -1.74
VRK3Q8IV63 RNY1P12-201ENST00000364251 105 ntBASIC4.21□□□□□ -1.74
VRK3Q8IV63 RNU1-132P-201ENST00000364300 164 ntBASIC4.21□□□□□ -1.74
VRK3Q8IV63 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
VRK3Q8IV63 RNU6-463P-201ENST00000384340 107 ntBASIC4.21□□□□□ -1.74
VRK3Q8IV63 SNORA68.2-201ENST00000391263 128 ntBASIC4.21□□□□□ -1.74
VRK3Q8IV63 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
VRK3Q8IV63 RPL7P60-201ENST00000397636 735 ntBASIC4.21□□□□□ -1.74
VRK3Q8IV63 LAP3P1-201ENST00000403648 294 ntBASIC4.21□□□□□ -1.74
VRK3Q8IV63 AL591416.1-201ENST00000404015 867 ntBASIC4.21□□□□□ -1.74
VRK3Q8IV63 RNU4-25P-201ENST00000410569 230 ntBASIC4.21□□□□□ -1.74
VRK3Q8IV63 FAR2P2-201ENST00000413041 594 ntBASIC4.21□□□□□ -1.74
VRK3Q8IV63 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.21□□□□□ -1.74
VRK3Q8IV63 AC007283.2-201ENST00000424739 197 ntBASIC4.21□□□□□ -1.74
VRK3Q8IV63 FAR2P4-202ENST00000425399 584 ntBASIC4.21□□□□□ -1.74
VRK3Q8IV63 RPL37P1-201ENST00000432310 284 ntBASIC4.21□□□□□ -1.74
VRK3Q8IV63 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
VRK3Q8IV63 AC073415.1-201ENST00000449240 153 ntBASIC4.21□□□□□ -1.74
VRK3Q8IV63 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.21□□□□□ -1.74
VRK3Q8IV63 RPS20P32-201ENST00000456044 356 ntBASIC4.21□□□□□ -1.74
VRK3Q8IV63 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.21□□□□□ -1.74
VRK3Q8IV63 Y_RNA.631-201ENST00000459607 101 ntBASIC4.21□□□□□ -1.74
VRK3Q8IV63 GMFBP1-201ENST00000467831 427 ntBASIC4.21□□□□□ -1.74
VRK3Q8IV63 PABPC1P3-201ENST00000469174 459 ntBASIC4.21□□□□□ -1.74
VRK3Q8IV63 AP000893.1-201ENST00000474462 794 ntBASIC4.21□□□□□ -1.74
VRK3Q8IV63 RN7SL691P-201ENST00000494487 301 ntBASIC4.21□□□□□ -1.74
VRK3Q8IV63 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
VRK3Q8IV63 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.21□□□□□ -1.74
VRK3Q8IV63 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.21□□□□□ -1.74
VRK3Q8IV63 AC110792.2-201ENST00000510278 224 ntBASIC4.21□□□□□ -1.74
VRK3Q8IV63 AC114797.1-201ENST00000514003 728 ntBASIC4.21□□□□□ -1.74
VRK3Q8IV63 AC093677.1-201ENST00000514414 678 ntBASIC4.21□□□□□ -1.74
VRK3Q8IV63 SCARNA24.1-201ENST00000516465 137 ntBASIC4.21□□□□□ -1.74
VRK3Q8IV63 AC008694.2-201ENST00000517591 306 ntBASIC4.21□□□□□ -1.74
VRK3Q8IV63 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC4.21□□□□□ -1.74
VRK3Q8IV63 OR4R1P-201ENST00000529879 463 ntBASIC4.21□□□□□ -1.74
VRK3Q8IV63 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.21□□□□□ -1.74
VRK3Q8IV63 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.21□□□□□ -1.74
VRK3Q8IV63 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.21□□□□□ -1.74
VRK3Q8IV63 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.21□□□□□ -1.74
VRK3Q8IV63 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.21□□□□□ -1.74
VRK3Q8IV63 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.21□□□□□ -1.74
VRK3Q8IV63 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.21□□□□□ -1.74
VRK3Q8IV63 MIR6798-201ENST00000612887 67 ntBASIC4.21□□□□□ -1.74
VRK3Q8IV63 AC131238.1-201ENST00000617135 328 ntBASIC4.21□□□□□ -1.74
VRK3Q8IV63 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.21□□□□□ -1.74
VRK3Q8IV63 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.21□□□□□ -1.74
VRK3Q8IV63 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
VRK3Q8IV63 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
VRK3Q8IV63 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
VRK3Q8IV63 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
VRK3Q8IV63 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.21□□□□□ -1.74
VRK3Q8IV63 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
VRK3Q8IV63 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
VRK3Q8IV63 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.21□□□□□ -1.74
VRK3Q8IV63 MTND5P16-201ENST00000460269 1703 ntBASIC4.21□□□□□ -1.74
VRK3Q8IV63 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.21□□□□□ -1.74
VRK3Q8IV63 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
VRK3Q8IV63 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
VRK3Q8IV63 AC105074.1-201ENST00000623380 3095 ntBASIC4.2□□□□□ -1.74
VRK3Q8IV63 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.2□□□□□ -1.74
VRK3Q8IV63 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
VRK3Q8IV63 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
VRK3Q8IV63 RNU6-254P-201ENST00000363377 107 ntBASIC4.2□□□□□ -1.74
VRK3Q8IV63 Y_RNA.259-201ENST00000364619 101 ntBASIC4.2□□□□□ -1.74
VRK3Q8IV63 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
VRK3Q8IV63 RNU6-831P-201ENST00000384548 107 ntBASIC4.2□□□□□ -1.74
VRK3Q8IV63 MIR514A2-201ENST00000385131 88 ntBASIC4.2□□□□□ -1.74
VRK3Q8IV63 MIR514A3-201ENST00000385132 88 ntBASIC4.2□□□□□ -1.74
VRK3Q8IV63 AC016769.3-201ENST00000396562 315 ntBASIC4.2□□□□□ -1.74
VRK3Q8IV63 RNA5SP36-201ENST00000410197 133 ntBASIC4.2□□□□□ -1.74
VRK3Q8IV63 RN7SKP235-201ENST00000410662 305 ntBASIC4.2□□□□□ -1.74
VRK3Q8IV63 RNA5SP146-201ENST00000410743 123 ntBASIC4.2□□□□□ -1.74
VRK3Q8IV63 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC4.2□□□□□ -1.74
VRK3Q8IV63 PRELID3BP11-201ENST00000414230 479 ntBASIC4.2□□□□□ -1.74
VRK3Q8IV63 NDUFB4P5-201ENST00000415445 361 ntBASIC4.2□□□□□ -1.74
VRK3Q8IV63 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.2□□□□□ -1.74
VRK3Q8IV63 AC048351.1-201ENST00000420064 602 ntBASIC4.2□□□□□ -1.74
VRK3Q8IV63 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC4.2□□□□□ -1.74
VRK3Q8IV63 DUTP6-201ENST00000425573 462 ntBASIC4.2□□□□□ -1.74
VRK3Q8IV63 AC016712.1-201ENST00000431088 378 ntBASIC4.2□□□□□ -1.74
VRK3Q8IV63 AC119618.1-201ENST00000434191 222 ntBASIC4.2□□□□□ -1.74
VRK3Q8IV63 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.2□□□□□ -1.74
VRK3Q8IV63 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.2□□□□□ -1.74
VRK3Q8IV63 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.2□□□□□ -1.74
VRK3Q8IV63 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.2□□□□□ -1.74
VRK3Q8IV63 AC090096.1-201ENST00000489168 390 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms