Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 AL158071.1-201ENST00000430315 461 ntBASIC3.64□□□□□ -1.83
PRPF39Q86UA1 AC108734.1-201ENST00000439549 399 ntBASIC3.64□□□□□ -1.83
PRPF39Q86UA1 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC3.64□□□□□ -1.83
PRPF39Q86UA1 AC104978.1-201ENST00000449387 391 ntBASIC3.64□□□□□ -1.83
PRPF39Q86UA1 ZNF736P8Y-201ENST00000451913 669 ntBASIC3.64□□□□□ -1.83
PRPF39Q86UA1 AC104308.1-201ENST00000454621 333 ntBASIC3.64□□□□□ -1.83
PRPF39Q86UA1 AC106872.3-201ENST00000495104 446 ntBASIC3.64□□□□□ -1.83
PRPF39Q86UA1 RPL7P47-201ENST00000497299 556 ntBASIC3.64□□□□□ -1.83
PRPF39Q86UA1 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.64□□□□□ -1.83
PRPF39Q86UA1 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.64□□□□□ -1.83
PRPF39Q86UA1 HMGN1P28-201ENST00000521340 364 ntBASIC3.64□□□□□ -1.83
PRPF39Q86UA1 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.64□□□□□ -1.83
PRPF39Q86UA1 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.64□□□□□ -1.83
PRPF39Q86UA1 AL163153.1-201ENST00000554223 283 ntBASIC3.64□□□□□ -1.83
PRPF39Q86UA1 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.64□□□□□ -1.83
PRPF39Q86UA1 MIR3921-201ENST00000577308 85 ntBASIC3.64□□□□□ -1.83
PRPF39Q86UA1 AC105224.1-201ENST00000587055 421 ntBASIC3.64□□□□□ -1.83
PRPF39Q86UA1 VN1R92P-201ENST00000598511 928 ntBASIC3.64□□□□□ -1.83
PRPF39Q86UA1 BNIP3P23-201ENST00000599655 511 ntBASIC3.64□□□□□ -1.83
PRPF39Q86UA1 AC093424.1-201ENST00000604999 338 ntBASIC3.64□□□□□ -1.83
PRPF39Q86UA1 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.64□□□□□ -1.83
PRPF39Q86UA1 AC096577.2-201ENST00000611455 153 ntBASIC3.64□□□□□ -1.83
PRPF39Q86UA1 AC021755.4-201ENST00000616620 456 ntBASIC3.64□□□□□ -1.83
PRPF39Q86UA1 MIR7975-201ENST00000619350 68 ntBASIC3.64□□□□□ -1.83
PRPF39Q86UA1 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PRPF39Q86UA1 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.64□□□□□ -1.83
PRPF39Q86UA1 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.64□□□□□ -1.83
PRPF39Q86UA1 AC068647.1-201ENST00000489539 2265 ntBASIC3.64□□□□□ -1.83
PRPF39Q86UA1 AP000526.1-201ENST00000603308 1388 ntBASIC3.63□□□□□ -1.83
PRPF39Q86UA1 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PRPF39Q86UA1 AC090740.1-201ENST00000623193 2262 ntBASIC3.63□□□□□ -1.83
PRPF39Q86UA1 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PRPF39Q86UA1 RNU6-637P-201ENST00000384050 107 ntBASIC3.63□□□□□ -1.83
PRPF39Q86UA1 RNU6-76P-201ENST00000384060 104 ntBASIC3.63□□□□□ -1.83
PRPF39Q86UA1 MIR1290-201ENST00000408735 78 ntBASIC3.63□□□□□ -1.83
PRPF39Q86UA1 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.63□□□□□ -1.83
PRPF39Q86UA1 HMGB3P23-201ENST00000414981 585 ntBASIC3.63□□□□□ -1.83
PRPF39Q86UA1 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.63□□□□□ -1.83
PRPF39Q86UA1 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.63□□□□□ -1.83
PRPF39Q86UA1 RPL7L1P10-201ENST00000427790 463 ntBASIC3.63□□□□□ -1.83
PRPF39Q86UA1 CYCSP4-201ENST00000429682 331 ntBASIC3.63□□□□□ -1.83
PRPF39Q86UA1 AL159987.2-201ENST00000432754 307 ntBASIC3.63□□□□□ -1.83
PRPF39Q86UA1 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.63□□□□□ -1.83
PRPF39Q86UA1 RPL26P6-201ENST00000440913 438 ntBASIC3.63□□□□□ -1.83
PRPF39Q86UA1 AL591503.2-201ENST00000442314 1005 ntBASIC3.63□□□□□ -1.83
PRPF39Q86UA1 RPS3AP12-201ENST00000443616 753 ntBASIC3.63□□□□□ -1.83
PRPF39Q86UA1 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.63□□□□□ -1.83
PRPF39Q86UA1 MTND1P9-201ENST00000453775 944 ntBASIC3.63□□□□□ -1.83
PRPF39Q86UA1 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.63□□□□□ -1.83
PRPF39Q86UA1 RPL23AP14-201ENST00000468281 468 ntBASIC3.63□□□□□ -1.83
PRPF39Q86UA1 RPL32P34-201ENST00000486380 400 ntBASIC3.63□□□□□ -1.83
PRPF39Q86UA1 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.63□□□□□ -1.83
PRPF39Q86UA1 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.63□□□□□ -1.83
PRPF39Q86UA1 RN7SKP287-201ENST00000516546 266 ntBASIC3.63□□□□□ -1.83
PRPF39Q86UA1 SNORA70.18-201ENST00000516696 98 ntBASIC3.63□□□□□ -1.83
PRPF39Q86UA1 RPL12P22-201ENST00000519073 490 ntBASIC3.63□□□□□ -1.83
PRPF39Q86UA1 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.63□□□□□ -1.83
PRPF39Q86UA1 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.63□□□□□ -1.83
PRPF39Q86UA1 AC103843.2-201ENST00000530523 682 ntBASIC3.63□□□□□ -1.83
PRPF39Q86UA1 ELOCP32-201ENST00000548625 324 ntBASIC3.63□□□□□ -1.83
PRPF39Q86UA1 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.63□□□□□ -1.83
PRPF39Q86UA1 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.63□□□□□ -1.83
PRPF39Q86UA1 AC018816.2-201ENST00000621460 353 ntBASIC3.63□□□□□ -1.83
PRPF39Q86UA1 AC006111.3-201ENST00000622137 383 ntBASIC3.63□□□□□ -1.83
PRPF39Q86UA1 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC3.63□□□□□ -1.83
PRPF39Q86UA1 PCMTD1P7-201ENST00000634506 357 ntBASIC3.63□□□□□ -1.83
PRPF39Q86UA1 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PRPF39Q86UA1 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.63□□□□□ -1.83
PRPF39Q86UA1 MTND5P1-201ENST00000445440 1375 ntBASIC3.63□□□□□ -1.83
PRPF39Q86UA1 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.63□□□□□ -1.83
PRPF39Q86UA1 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PRPF39Q86UA1 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
PRPF39Q86UA1 AL672167.1-206ENST00000356293 943 ntBASIC3.62□□□□□ -1.83
PRPF39Q86UA1 SNORD113-6-201ENST00000363345 75 ntBASIC3.62□□□□□ -1.83
PRPF39Q86UA1 RNU6-1200P-201ENST00000384162 107 ntBASIC3.62□□□□□ -1.83
PRPF39Q86UA1 U3.20-201ENST00000390909 217 ntBASIC3.62□□□□□ -1.83
PRPF39Q86UA1 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.62□□□□□ -1.83
PRPF39Q86UA1 U3.39-201ENST00000408569 239 ntBASIC3.62□□□□□ -1.83
PRPF39Q86UA1 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PRPF39Q86UA1 AC017079.2-201ENST00000416102 485 ntBASIC3.62□□□□□ -1.83
PRPF39Q86UA1 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.62□□□□□ -1.83
PRPF39Q86UA1 DBIP2-201ENST00000419076 262 ntBASIC3.62□□□□□ -1.83
PRPF39Q86UA1 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.62□□□□□ -1.83
PRPF39Q86UA1 AC090774.1-201ENST00000435925 246 ntBASIC3.62□□□□□ -1.83
PRPF39Q86UA1 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.62□□□□□ -1.83
PRPF39Q86UA1 YWHAZP7-201ENST00000436906 631 ntBASIC3.62□□□□□ -1.83
PRPF39Q86UA1 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.62□□□□□ -1.83
PRPF39Q86UA1 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
PRPF39Q86UA1 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.62□□□□□ -1.83
PRPF39Q86UA1 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PRPF39Q86UA1 AP000542.1-201ENST00000448473 371 ntBASIC3.62□□□□□ -1.83
PRPF39Q86UA1 MTND2P24-201ENST00000453434 806 ntBASIC3.62□□□□□ -1.83
PRPF39Q86UA1 RPL31P60-201ENST00000478450 367 ntBASIC3.62□□□□□ -1.83
PRPF39Q86UA1 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.62□□□□□ -1.83
PRPF39Q86UA1 AC109464.2-201ENST00000510242 943 ntBASIC3.62□□□□□ -1.83
PRPF39Q86UA1 RNU6-840P-201ENST00000517275 65 ntBASIC3.62□□□□□ -1.83
PRPF39Q86UA1 MRPS36P3-201ENST00000519284 130 ntBASIC3.62□□□□□ -1.83
PRPF39Q86UA1 AP003497.1-201ENST00000528472 562 ntBASIC3.62□□□□□ -1.83
PRPF39Q86UA1 AC023538.1-201ENST00000534576 736 ntBASIC3.62□□□□□ -1.83
PRPF39Q86UA1 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms