Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
SH3RF1Q7Z6J0 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC6.11□□□□□ -1.43
SH3RF1Q7Z6J0 AC006600.1-201ENST00000572529 153 ntBASIC6.11□□□□□ -1.43
SH3RF1Q7Z6J0 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC6.11□□□□□ -1.43
SH3RF1Q7Z6J0 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
SH3RF1Q7Z6J0 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC6.11□□□□□ -1.43
SH3RF1Q7Z6J0 AC069307.1-201ENST00000602820 447 ntBASIC6.11□□□□□ -1.43
SH3RF1Q7Z6J0 AC130454.1-201ENST00000622948 401 ntBASIC6.11□□□□□ -1.43
SH3RF1Q7Z6J0 AC091925.2-201ENST00000625059 256 ntBASIC6.11□□□□□ -1.43
SH3RF1Q7Z6J0 CYP4F35P-202ENST00000636121 390 ntBASIC6.11□□□□□ -1.43
SH3RF1Q7Z6J0 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
SH3RF1Q7Z6J0 AC116667.1-201ENST00000604855 2072 ntBASIC6.11□□□□□ -1.43
SH3RF1Q7Z6J0 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
SH3RF1Q7Z6J0 TEK-205ENST00000615002 4666 ntTSL 5 BASIC6.11□□□□□ -1.43
SH3RF1Q7Z6J0 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
SH3RF1Q7Z6J0 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SH3RF1Q7Z6J0 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SH3RF1Q7Z6J0 AC093671.1-201ENST00000624981 2929 ntBASIC6.1□□□□□ -1.43
SH3RF1Q7Z6J0 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SH3RF1Q7Z6J0 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC6.1□□□□□ -1.43
SH3RF1Q7Z6J0 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
SH3RF1Q7Z6J0 AC092079.1-201ENST00000558620 1985 ntBASIC6.1□□□□□ -1.43
SH3RF1Q7Z6J0 RN7SKP95-201ENST00000362860 303 ntBASIC6.1□□□□□ -1.43
SH3RF1Q7Z6J0 SNORA23-201ENST00000365128 182 ntBASIC6.1□□□□□ -1.43
SH3RF1Q7Z6J0 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SH3RF1Q7Z6J0 Y_RNA.464-201ENST00000384282 110 ntBASIC6.1□□□□□ -1.43
SH3RF1Q7Z6J0 SNORA51.11-201ENST00000384442 131 ntBASIC6.1□□□□□ -1.43
SH3RF1Q7Z6J0 RNU6-754P-201ENST00000391166 107 ntBASIC6.1□□□□□ -1.43
SH3RF1Q7Z6J0 SAR1AP2-201ENST00000392696 594 ntBASIC6.1□□□□□ -1.43
SH3RF1Q7Z6J0 AL139039.1-201ENST00000401900 692 ntBASIC6.1□□□□□ -1.43
SH3RF1Q7Z6J0 AL138885.1-201ENST00000405921 675 ntBASIC6.1□□□□□ -1.43
SH3RF1Q7Z6J0 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC6.1□□□□□ -1.43
SH3RF1Q7Z6J0 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SH3RF1Q7Z6J0 NEFMP1-201ENST00000443423 1006 ntBASIC6.1□□□□□ -1.43
SH3RF1Q7Z6J0 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC6.1□□□□□ -1.43
SH3RF1Q7Z6J0 RN7SL591P-201ENST00000496150 292 ntBASIC6.1□□□□□ -1.43
SH3RF1Q7Z6J0 RN7SKP147-201ENST00000517154 244 ntBASIC6.1□□□□□ -1.43
SH3RF1Q7Z6J0 AC027369.5-201ENST00000533838 755 ntBASIC6.1□□□□□ -1.43
SH3RF1Q7Z6J0 BNIP3P1-201ENST00000547295 580 ntBASIC6.1□□□□□ -1.43
SH3RF1Q7Z6J0 AC063949.1-201ENST00000552900 865 ntBASIC6.1□□□□□ -1.43
SH3RF1Q7Z6J0 RPL10P14-201ENST00000565265 298 ntBASIC6.1□□□□□ -1.43
SH3RF1Q7Z6J0 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SH3RF1Q7Z6J0 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC6.1□□□□□ -1.43
SH3RF1Q7Z6J0 AC244107.2-201ENST00000611773 76 ntBASIC6.1□□□□□ -1.43
SH3RF1Q7Z6J0 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.1□□□□□ -1.43
SH3RF1Q7Z6J0 AL031119.1-201ENST00000404707 1879 ntBASIC6.1□□□□□ -1.43
SH3RF1Q7Z6J0 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SH3RF1Q7Z6J0 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.1□□□□□ -1.43
SH3RF1Q7Z6J0 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
SH3RF1Q7Z6J0 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
SH3RF1Q7Z6J0 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SH3RF1Q7Z6J0 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SH3RF1Q7Z6J0 AC092376.2-201ENST00000622621 4116 ntBASIC6.1□□□□□ -1.43
SH3RF1Q7Z6J0 AL078621.3-201ENST00000623707 2042 ntBASIC6.09□□□□□ -1.43
SH3RF1Q7Z6J0 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SH3RF1Q7Z6J0 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SH3RF1Q7Z6J0 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC6.09□□□□□ -1.43
SH3RF1Q7Z6J0 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC6.09□□□□□ -1.43
SH3RF1Q7Z6J0 AC108751.5-201ENST00000492880 1336 ntBASIC6.09□□□□□ -1.43
SH3RF1Q7Z6J0 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
SH3RF1Q7Z6J0 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
SH3RF1Q7Z6J0 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
SH3RF1Q7Z6J0 Y_RNA.20-201ENST00000362479 113 ntBASIC6.09□□□□□ -1.43
SH3RF1Q7Z6J0 Y_RNA.26-201ENST00000362539 101 ntBASIC6.09□□□□□ -1.43
SH3RF1Q7Z6J0 RNA5SP123-201ENST00000363244 119 ntBASIC6.09□□□□□ -1.43
SH3RF1Q7Z6J0 RNU6-806P-201ENST00000365147 105 ntBASIC6.09□□□□□ -1.43
SH3RF1Q7Z6J0 Y_RNA.462-201ENST00000384268 102 ntBASIC6.09□□□□□ -1.43
SH3RF1Q7Z6J0 Y_RNA.518-201ENST00000384552 113 ntBASIC6.09□□□□□ -1.43
SH3RF1Q7Z6J0 AC013442.1-201ENST00000397347 228 ntBASIC6.09□□□□□ -1.43
SH3RF1Q7Z6J0 AP000275.1-201ENST00000411943 390 ntBASIC6.09□□□□□ -1.43
SH3RF1Q7Z6J0 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SH3RF1Q7Z6J0 AL353997.1-201ENST00000432936 108 ntBASIC6.09□□□□□ -1.43
SH3RF1Q7Z6J0 TMSB4XP3-201ENST00000445144 114 ntBASIC6.09□□□□□ -1.43
SH3RF1Q7Z6J0 CHEK2P4-201ENST00000450340 246 ntBASIC6.09□□□□□ -1.43
SH3RF1Q7Z6J0 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC6.09□□□□□ -1.43
SH3RF1Q7Z6J0 RPL23AP31-201ENST00000456160 467 ntBASIC6.09□□□□□ -1.43
SH3RF1Q7Z6J0 RNU7-187P-201ENST00000458985 68 ntBASIC6.09□□□□□ -1.43
SH3RF1Q7Z6J0 AC053481.1-201ENST00000467217 306 ntBASIC6.09□□□□□ -1.43
SH3RF1Q7Z6J0 CREM-226ENST00000469949 721 ntTSL 3 BASIC6.09□□□□□ -1.43
SH3RF1Q7Z6J0 AC092436.3-201ENST00000511788 257 ntBASIC6.09□□□□□ -1.43
SH3RF1Q7Z6J0 AC012339.2-201ENST00000523996 453 ntBASIC6.09□□□□□ -1.43
SH3RF1Q7Z6J0 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC6.09□□□□□ -1.43
SH3RF1Q7Z6J0 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC6.09□□□□□ -1.43
SH3RF1Q7Z6J0 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC6.09□□□□□ -1.43
SH3RF1Q7Z6J0 SARNP-203ENST00000552080 726 ntTSL 2 BASIC6.09□□□□□ -1.43
SH3RF1Q7Z6J0 RN7SL290P-201ENST00000578661 300 ntBASIC6.09□□□□□ -1.43
SH3RF1Q7Z6J0 NF1P5-201ENST00000588287 448 ntBASIC6.09□□□□□ -1.43
SH3RF1Q7Z6J0 AC012433.1-201ENST00000588916 398 ntBASIC6.09□□□□□ -1.43
SH3RF1Q7Z6J0 VN1R91P-201ENST00000594377 169 ntBASIC6.09□□□□□ -1.43
SH3RF1Q7Z6J0 RNF138P2-201ENST00000603490 592 ntBASIC6.09□□□□□ -1.43
SH3RF1Q7Z6J0 MIR6864-201ENST00000617935 70 ntBASIC6.09□□□□□ -1.43
SH3RF1Q7Z6J0 AC091953.5-201ENST00000622919 233 ntBASIC6.09□□□□□ -1.43
SH3RF1Q7Z6J0 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
SH3RF1Q7Z6J0 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
SH3RF1Q7Z6J0 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.09□□□□□ -1.43
SH3RF1Q7Z6J0 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.44
SH3RF1Q7Z6J0 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SH3RF1Q7Z6J0 AC020656.2-201ENST00000613291 5309 ntBASIC6.08□□□□□ -1.44
SH3RF1Q7Z6J0 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SH3RF1Q7Z6J0 ABCC13-202ENST00000463099 3842 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms