Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 RNU6-600P-201ENST00000362524 99 ntBASIC3.77□□□□□ -1.81
NPHP3Q7Z494 RNU6-839P-201ENST00000363347 108 ntBASIC3.77□□□□□ -1.81
NPHP3Q7Z494 RNU6-115P-201ENST00000364310 107 ntBASIC3.77□□□□□ -1.81
NPHP3Q7Z494 RNU4-68P-201ENST00000364314 141 ntBASIC3.77□□□□□ -1.81
NPHP3Q7Z494 AL121978.1-201ENST00000402778 359 ntBASIC3.77□□□□□ -1.81
NPHP3Q7Z494 AL136310.1-201ENST00000404926 654 ntBASIC3.77□□□□□ -1.81
NPHP3Q7Z494 AL139098.1-201ENST00000407291 389 ntBASIC3.77□□□□□ -1.81
NPHP3Q7Z494 RNU4-78P-201ENST00000410940 126 ntBASIC3.77□□□□□ -1.81
NPHP3Q7Z494 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.77□□□□□ -1.81
NPHP3Q7Z494 OFD1P18Y-201ENST00000420889 959 ntBASIC3.77□□□□□ -1.81
NPHP3Q7Z494 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.77□□□□□ -1.81
NPHP3Q7Z494 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC3.77□□□□□ -1.81
NPHP3Q7Z494 MTCO1P3-201ENST00000429327 192 ntBASIC3.77□□□□□ -1.81
NPHP3Q7Z494 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC3.77□□□□□ -1.81
NPHP3Q7Z494 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.77□□□□□ -1.81
NPHP3Q7Z494 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.77□□□□□ -1.81
NPHP3Q7Z494 UBE2D3P1-201ENST00000436669 444 ntBASIC3.77□□□□□ -1.81
NPHP3Q7Z494 AC093155.1-201ENST00000440164 826 ntBASIC3.77□□□□□ -1.81
NPHP3Q7Z494 EEF1A1P39-201ENST00000440791 250 ntBASIC3.77□□□□□ -1.81
NPHP3Q7Z494 AC104073.1-201ENST00000451988 151 ntBASIC3.77□□□□□ -1.81
NPHP3Q7Z494 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC3.77□□□□□ -1.81
NPHP3Q7Z494 AC005410.1-202ENST00000460347 485 ntBASIC3.77□□□□□ -1.81
NPHP3Q7Z494 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.77□□□□□ -1.81
NPHP3Q7Z494 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.77□□□□□ -1.81
NPHP3Q7Z494 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.77□□□□□ -1.81
NPHP3Q7Z494 MTCO3P44-201ENST00000510977 541 ntBASIC3.77□□□□□ -1.81
NPHP3Q7Z494 AC245166.1-201ENST00000521012 253 ntBASIC3.77□□□□□ -1.81
NPHP3Q7Z494 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
NPHP3Q7Z494 LSM6P2-201ENST00000552208 177 ntBASIC3.77□□□□□ -1.81
NPHP3Q7Z494 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.77□□□□□ -1.81
NPHP3Q7Z494 SNORD39.3-201ENST00000584451 71 ntBASIC3.77□□□□□ -1.81
NPHP3Q7Z494 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.77□□□□□ -1.81
NPHP3Q7Z494 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.77□□□□□ -1.81
NPHP3Q7Z494 AL158827.2-201ENST00000602494 330 ntBASIC3.77□□□□□ -1.81
NPHP3Q7Z494 AL035411.2-201ENST00000604022 421 ntBASIC3.77□□□□□ -1.81
NPHP3Q7Z494 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.77□□□□□ -1.81
NPHP3Q7Z494 AL157770.1-201ENST00000623049 439 ntBASIC3.77□□□□□ -1.81
NPHP3Q7Z494 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.77□□□□□ -1.81
NPHP3Q7Z494 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.77□□□□□ -1.81
NPHP3Q7Z494 AL691447.3-201ENST00000635020 330 ntBASIC3.77□□□□□ -1.81
NPHP3Q7Z494 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.77□□□□□ -1.81
NPHP3Q7Z494 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.77□□□□□ -1.81
NPHP3Q7Z494 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.77□□□□□ -1.81
NPHP3Q7Z494 AP005901.5-201ENST00000545779 1796 ntBASIC3.77□□□□□ -1.81
NPHP3Q7Z494 GABRG2-229ENST00000641017 3628 ntBASIC3.77□□□□□ -1.81
NPHP3Q7Z494 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
NPHP3Q7Z494 SNORA7.2-201ENST00000364446 145 ntBASIC3.76□□□□□ -1.81
NPHP3Q7Z494 MIR607-201ENST00000385241 96 ntBASIC3.76□□□□□ -1.81
NPHP3Q7Z494 AL513477.1-202ENST00000417061 214 ntBASIC3.76□□□□□ -1.81
NPHP3Q7Z494 AL356320.2-201ENST00000417263 507 ntBASIC3.76□□□□□ -1.81
NPHP3Q7Z494 AC009963.1-201ENST00000417265 157 ntBASIC3.76□□□□□ -1.81
NPHP3Q7Z494 Z75741.2-201ENST00000417272 1167 ntBASIC3.76□□□□□ -1.81
NPHP3Q7Z494 OR2AS1P-201ENST00000427827 319 ntBASIC3.76□□□□□ -1.81
NPHP3Q7Z494 RN7SL633P-201ENST00000488974 297 ntBASIC3.76□□□□□ -1.81
NPHP3Q7Z494 AP001086.1-201ENST00000494882 321 ntBASIC3.76□□□□□ -1.81
NPHP3Q7Z494 RPL23AP55-201ENST00000498163 452 ntBASIC3.76□□□□□ -1.81
NPHP3Q7Z494 AC020699.1-201ENST00000505161 445 ntBASIC3.76□□□□□ -1.81
NPHP3Q7Z494 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.76□□□□□ -1.81
NPHP3Q7Z494 RNA5SP135-201ENST00000517019 125 ntBASIC3.76□□□□□ -1.81
NPHP3Q7Z494 AP003385.6-201ENST00000531603 374 ntBASIC3.76□□□□□ -1.81
NPHP3Q7Z494 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC3.76□□□□□ -1.81
NPHP3Q7Z494 AC027176.1-201ENST00000560204 514 ntBASIC3.76□□□□□ -1.81
NPHP3Q7Z494 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.76□□□□□ -1.81
NPHP3Q7Z494 AC090116.1-201ENST00000615679 446 ntBASIC3.76□□□□□ -1.81
NPHP3Q7Z494 AC025034.2-201ENST00000623264 286 ntBASIC3.76□□□□□ -1.81
NPHP3Q7Z494 OR1S1-201ENST00000624470 978 ntBASIC3.76□□□□□ -1.81
NPHP3Q7Z494 CTSLP2-204ENST00000629029 392 ntBASIC3.76□□□□□ -1.81
NPHP3Q7Z494 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.76□□□□□ -1.81
NPHP3Q7Z494 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
NPHP3Q7Z494 ZNF542P-204ENST00000482727 1305 ntBASIC3.76□□□□□ -1.81
NPHP3Q7Z494 EXOC5P1-201ENST00000510543 1969 ntBASIC3.76□□□□□ -1.81
NPHP3Q7Z494 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
NPHP3Q7Z494 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.76□□□□□ -1.81
NPHP3Q7Z494 AC099786.3-201ENST00000565735 1410 ntBASIC3.75□□□□□ -1.81
NPHP3Q7Z494 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
NPHP3Q7Z494 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.75□□□□□ -1.81
NPHP3Q7Z494 HMGB1P5-201ENST00000255320 642 ntBASIC3.75□□□□□ -1.81
NPHP3Q7Z494 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.75□□□□□ -1.81
NPHP3Q7Z494 RNU6-339P-201ENST00000384310 107 ntBASIC3.75□□□□□ -1.81
NPHP3Q7Z494 SNORD65.1-201ENST00000390889 71 ntBASIC3.75□□□□□ -1.81
NPHP3Q7Z494 AL138880.1-201ENST00000405824 642 ntBASIC3.75□□□□□ -1.81
NPHP3Q7Z494 RPS4XP7-201ENST00000406274 780 ntBASIC3.75□□□□□ -1.81
NPHP3Q7Z494 AL133264.1-201ENST00000407157 562 ntBASIC3.75□□□□□ -1.81
NPHP3Q7Z494 RNU2-37P-201ENST00000410695 177 ntBASIC3.75□□□□□ -1.81
NPHP3Q7Z494 AL136133.1-201ENST00000413694 376 ntBASIC3.75□□□□□ -1.81
NPHP3Q7Z494 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.75□□□□□ -1.81
NPHP3Q7Z494 TOMM22P1-201ENST00000418578 312 ntBASIC3.75□□□□□ -1.81
NPHP3Q7Z494 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.75□□□□□ -1.81
NPHP3Q7Z494 AL513175.2-201ENST00000422071 443 ntBASIC3.75□□□□□ -1.81
NPHP3Q7Z494 AL035410.1-201ENST00000427409 427 ntBASIC3.75□□□□□ -1.81
NPHP3Q7Z494 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.75□□□□□ -1.81
NPHP3Q7Z494 SEPT7P5-201ENST00000434048 306 ntBASIC3.75□□□□□ -1.81
NPHP3Q7Z494 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.75□□□□□ -1.81
NPHP3Q7Z494 GTF2IP7-202ENST00000436677 309 ntBASIC3.75□□□□□ -1.81
NPHP3Q7Z494 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
NPHP3Q7Z494 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.75□□□□□ -1.81
NPHP3Q7Z494 AC113347.3-201ENST00000509113 148 ntBASIC3.75□□□□□ -1.81
NPHP3Q7Z494 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.75□□□□□ -1.81
NPHP3Q7Z494 AP004371.1-201ENST00000525240 214 ntBASIC3.75□□□□□ -1.81
NPHP3Q7Z494 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms