Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.55□□□□□ -1.84
SHFQ7M4L6 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.55□□□□□ -1.84
SHFQ7M4L6 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.55□□□□□ -1.84
SHFQ7M4L6 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SHFQ7M4L6 IPO5P1-202ENST00000600039 287 ntBASIC3.55□□□□□ -1.84
SHFQ7M4L6 XIAPP1-201ENST00000603162 600 ntBASIC3.55□□□□□ -1.84
SHFQ7M4L6 AL022154.1-201ENST00000604698 785 ntBASIC3.55□□□□□ -1.84
SHFQ7M4L6 AC092794.1-201ENST00000612734 582 ntBASIC3.55□□□□□ -1.84
SHFQ7M4L6 MIR6730-201ENST00000622213 67 ntBASIC3.55□□□□□ -1.84
SHFQ7M4L6 MIR3653-201ENST00000625572 110 ntBASIC3.55□□□□□ -1.84
SHFQ7M4L6 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC3.55□□□□□ -1.84
SHFQ7M4L6 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.55□□□□□ -1.84
SHFQ7M4L6 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SHFQ7M4L6 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SHFQ7M4L6 AL138713.1-201ENST00000624026 2130 ntBASIC3.55□□□□□ -1.84
SHFQ7M4L6 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SHFQ7M4L6 PRO1804-201ENST00000623780 2050 ntBASIC3.55□□□□□ -1.84
SHFQ7M4L6 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.54□□□□□ -1.84
SHFQ7M4L6 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.54□□□□□ -1.84
SHFQ7M4L6 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
SHFQ7M4L6 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.54□□□□□ -1.84
SHFQ7M4L6 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SHFQ7M4L6 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
SHFQ7M4L6 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SHFQ7M4L6 RNU6-1155P-201ENST00000363554 107 ntBASIC3.54□□□□□ -1.84
SHFQ7M4L6 RNU6-1078P-201ENST00000364522 103 ntBASIC3.54□□□□□ -1.84
SHFQ7M4L6 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.54□□□□□ -1.84
SHFQ7M4L6 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.54□□□□□ -1.84
SHFQ7M4L6 CYB5AP4-201ENST00000396692 399 ntBASIC3.54□□□□□ -1.84
SHFQ7M4L6 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SHFQ7M4L6 HSPE1P12-201ENST00000412576 301 ntBASIC3.54□□□□□ -1.84
SHFQ7M4L6 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.54□□□□□ -1.84
SHFQ7M4L6 OR1AA1P-201ENST00000419597 916 ntBASIC3.54□□□□□ -1.84
SHFQ7M4L6 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.54□□□□□ -1.84
SHFQ7M4L6 AC244098.2-201ENST00000422068 99 ntBASIC3.54□□□□□ -1.84
SHFQ7M4L6 AC068287.1-201ENST00000430283 295 ntBASIC3.54□□□□□ -1.84
SHFQ7M4L6 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.54□□□□□ -1.84
SHFQ7M4L6 TIMM9P1-201ENST00000436122 256 ntBASIC3.54□□□□□ -1.84
SHFQ7M4L6 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.54□□□□□ -1.84
SHFQ7M4L6 HMGB1P37-201ENST00000439613 609 ntBASIC3.54□□□□□ -1.84
SHFQ7M4L6 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.54□□□□□ -1.84
SHFQ7M4L6 RANP8-201ENST00000444720 713 ntBASIC3.54□□□□□ -1.84
SHFQ7M4L6 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.54□□□□□ -1.84
SHFQ7M4L6 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.54□□□□□ -1.84
SHFQ7M4L6 AL645939.1-201ENST00000453429 797 ntBASIC3.54□□□□□ -1.84
SHFQ7M4L6 UQCRHP4-201ENST00000471686 272 ntBASIC3.54□□□□□ -1.84
SHFQ7M4L6 AC010587.1-201ENST00000505809 469 ntBASIC3.54□□□□□ -1.84
SHFQ7M4L6 AC022483.1-201ENST00000514020 567 ntBASIC3.54□□□□□ -1.84
SHFQ7M4L6 RNU6-798P-201ENST00000516912 103 ntBASIC3.54□□□□□ -1.84
SHFQ7M4L6 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC3.54□□□□□ -1.84
SHFQ7M4L6 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.54□□□□□ -1.84
SHFQ7M4L6 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.54□□□□□ -1.84
SHFQ7M4L6 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.54□□□□□ -1.84
SHFQ7M4L6 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.54□□□□□ -1.84
SHFQ7M4L6 AL133271.1-201ENST00000538229 291 ntBASIC3.54□□□□□ -1.84
SHFQ7M4L6 AC091516.1-201ENST00000549191 703 ntBASIC3.54□□□□□ -1.84
SHFQ7M4L6 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.54□□□□□ -1.84
SHFQ7M4L6 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.54□□□□□ -1.84
SHFQ7M4L6 TPRKBP2-201ENST00000565969 475 ntBASIC3.54□□□□□ -1.84
SHFQ7M4L6 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.54□□□□□ -1.84
SHFQ7M4L6 AP001429.1-201ENST00000602568 530 ntBASIC3.54□□□□□ -1.84
SHFQ7M4L6 AL158211.4-201ENST00000606988 584 ntBASIC3.54□□□□□ -1.84
SHFQ7M4L6 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.54□□□□□ -1.84
SHFQ7M4L6 MIR8059-201ENST00000620427 81 ntBASIC3.54□□□□□ -1.84
SHFQ7M4L6 AC009268.2-201ENST00000621925 457 ntBASIC3.54□□□□□ -1.84
SHFQ7M4L6 AL645937.1-201ENST00000641739 1652 ntBASIC3.54□□□□□ -1.84
SHFQ7M4L6 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.54□□□□□ -1.84
SHFQ7M4L6 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SHFQ7M4L6 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SHFQ7M4L6 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SHFQ7M4L6 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.54□□□□□ -1.84
SHFQ7M4L6 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.53□□□□□ -1.84
SHFQ7M4L6 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.53□□□□□ -1.84
SHFQ7M4L6 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
SHFQ7M4L6 AC090337.1-201ENST00000579651 2074 ntBASIC3.53□□□□□ -1.84
SHFQ7M4L6 LARP1BP1-201ENST00000506036 1359 ntBASIC3.53□□□□□ -1.84
SHFQ7M4L6 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
SHFQ7M4L6 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.53□□□□□ -1.84
SHFQ7M4L6 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.53□□□□□ -1.84
SHFQ7M4L6 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SHFQ7M4L6 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.53□□□□□ -1.84
SHFQ7M4L6 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
SHFQ7M4L6 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.53□□□□□ -1.84
SHFQ7M4L6 MIR135A2-201ENST00000384854 100 ntBASIC3.53□□□□□ -1.84
SHFQ7M4L6 RNU2-8P-201ENST00000410727 190 ntBASIC3.53□□□□□ -1.84
SHFQ7M4L6 AC127391.1-201ENST00000411737 98 ntBASIC3.53□□□□□ -1.84
SHFQ7M4L6 RPS7P15-201ENST00000415804 584 ntBASIC3.53□□□□□ -1.84
SHFQ7M4L6 PIGFP2-201ENST00000421400 651 ntBASIC3.53□□□□□ -1.84
SHFQ7M4L6 AC009480.2-201ENST00000422916 432 ntBASIC3.53□□□□□ -1.84
SHFQ7M4L6 AC245028.1-201ENST00000423259 256 ntBASIC3.53□□□□□ -1.84
SHFQ7M4L6 RPL23AP38-201ENST00000423801 469 ntBASIC3.53□□□□□ -1.84
SHFQ7M4L6 AL732292.1-201ENST00000426692 226 ntBASIC3.53□□□□□ -1.84
SHFQ7M4L6 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.53□□□□□ -1.84
SHFQ7M4L6 DNAJC19P7-201ENST00000428811 344 ntBASIC3.53□□□□□ -1.84
SHFQ7M4L6 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.53□□□□□ -1.84
SHFQ7M4L6 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.53□□□□□ -1.84
SHFQ7M4L6 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
SHFQ7M4L6 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.53□□□□□ -1.84
SHFQ7M4L6 RPL21P89-201ENST00000444021 467 ntBASIC3.53□□□□□ -1.84
SHFQ7M4L6 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 153.8 ms