Protein–RNA interactions for Protein: Q6ZT12

UBR3, E3 ubiquitin-protein ligase UBR3, humanhuman

Predictions only

Length 1,888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3Q6ZT12 RNU6-53P-201ENST00000365367 106 ntBASIC2.16□□□□□ -2.06
UBR3Q6ZT12 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.16□□□□□ -2.06
UBR3Q6ZT12 AC009237.2-201ENST00000421358 284 ntBASIC2.16□□□□□ -2.06
UBR3Q6ZT12 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC2.16□□□□□ -2.06
UBR3Q6ZT12 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.16□□□□□ -2.06
UBR3Q6ZT12 AC245517.4-201ENST00000448601 281 ntBASIC2.16□□□□□ -2.06
UBR3Q6ZT12 AMD1P1-201ENST00000457220 922 ntBASIC2.16□□□□□ -2.06
UBR3Q6ZT12 Y_RNA.670-201ENST00000516255 105 ntBASIC2.16□□□□□ -2.06
UBR3Q6ZT12 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.16□□□□□ -2.06
UBR3Q6ZT12 AP004242.1-201ENST00000533701 349 ntBASIC2.16□□□□□ -2.06
UBR3Q6ZT12 WISP1-OT1-201ENST00000602893 642 ntBASIC2.16□□□□□ -2.06
UBR3Q6ZT12 AC018754.1-201ENST00000607486 925 ntBASIC2.16□□□□□ -2.06
UBR3Q6ZT12 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.15□□□□□ -2.06
UBR3Q6ZT12 RPL19P1-201ENST00000411635 428 ntBASIC2.15□□□□□ -2.07
UBR3Q6ZT12 AC109583.1-201ENST00000432156 268 ntBASIC2.15□□□□□ -2.07
UBR3Q6ZT12 ARPC3P1-201ENST00000437218 533 ntBASIC2.15□□□□□ -2.07
UBR3Q6ZT12 VN1R96P-201ENST00000446052 858 ntBASIC2.15□□□□□ -2.07
UBR3Q6ZT12 AL137159.1-201ENST00000452808 512 ntBASIC2.15□□□□□ -2.07
UBR3Q6ZT12 CLIC4P1-201ENST00000453177 535 ntBASIC2.15□□□□□ -2.07
UBR3Q6ZT12 SNORA31.26-201ENST00000517250 137 ntBASIC2.15□□□□□ -2.07
UBR3Q6ZT12 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC2.15□□□□□ -2.07
UBR3Q6ZT12 RPL23AP88-201ENST00000605759 454 ntBASIC2.15□□□□□ -2.07
UBR3Q6ZT12 AC131902.3-201ENST00000611767 581 ntBASIC2.15□□□□□ -2.07
UBR3Q6ZT12 MIR6504-201ENST00000613520 61 ntBASIC2.15□□□□□ -2.07
UBR3Q6ZT12 AC034102.8-201ENST00000615146 484 ntBASIC2.15□□□□□ -2.07
UBR3Q6ZT12 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.15□□□□□ -2.07
UBR3Q6ZT12 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.15□□□□□ -2.07
UBR3Q6ZT12 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC2.15□□□□□ -2.07
UBR3Q6ZT12 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.15□□□□□ -2.07
UBR3Q6ZT12 Y_RNA.191-201ENST00000363972 113 ntBASIC2.14□□□□□ -2.07
UBR3Q6ZT12 RN7SKP101-201ENST00000411376 320 ntBASIC2.14□□□□□ -2.07
UBR3Q6ZT12 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.14□□□□□ -2.07
UBR3Q6ZT12 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.14□□□□□ -2.07
UBR3Q6ZT12 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.14□□□□□ -2.07
UBR3Q6ZT12 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.14□□□□□ -2.07
UBR3Q6ZT12 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
UBR3Q6ZT12 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
UBR3Q6ZT12 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
UBR3Q6ZT12 SNORA31-201ENST00000362607 130 ntBASIC2.14□□□□□ -2.07
UBR3Q6ZT12 AL121972.1-201ENST00000402023 252 ntBASIC2.14□□□□□ -2.07
UBR3Q6ZT12 RPL7P46-201ENST00000425129 740 ntBASIC2.14□□□□□ -2.07
UBR3Q6ZT12 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.14□□□□□ -2.07
UBR3Q6ZT12 USP9YP10-201ENST00000454868 628 ntBASIC2.14□□□□□ -2.07
UBR3Q6ZT12 RPL23AP55-201ENST00000498163 452 ntBASIC2.14□□□□□ -2.07
UBR3Q6ZT12 AC109464.2-201ENST00000510242 943 ntBASIC2.14□□□□□ -2.07
UBR3Q6ZT12 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.14□□□□□ -2.07
UBR3Q6ZT12 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.14□□□□□ -2.07
UBR3Q6ZT12 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC2.14□□□□□ -2.07
UBR3Q6ZT12 AC104581.2-201ENST00000572227 430 ntBASIC2.14□□□□□ -2.07
UBR3Q6ZT12 MIR4716-201ENST00000579628 84 ntBASIC2.14□□□□□ -2.07
UBR3Q6ZT12 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.14□□□□□ -2.07
UBR3Q6ZT12 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
UBR3Q6ZT12 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
UBR3Q6ZT12 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
UBR3Q6ZT12 DPPA2P1-201ENST00000428060 556 ntBASIC2.13□□□□□ -2.07
UBR3Q6ZT12 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC2.13□□□□□ -2.07
UBR3Q6ZT12 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.13□□□□□ -2.07
UBR3Q6ZT12 RMST_6.1-201ENST00000611980 203 ntBASIC2.13□□□□□ -2.07
UBR3Q6ZT12 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
UBR3Q6ZT12 AC011978.2-201ENST00000569835 2054 ntBASIC2.12□□□□□ -2.07
UBR3Q6ZT12 AL391987.6-201ENST00000305671 199 ntBASIC2.12□□□□□ -2.07
UBR3Q6ZT12 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.12□□□□□ -2.07
UBR3Q6ZT12 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.12□□□□□ -2.07
UBR3Q6ZT12 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
UBR3Q6ZT12 MTCO3P21-201ENST00000430791 643 ntBASIC2.12□□□□□ -2.07
UBR3Q6ZT12 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
UBR3Q6ZT12 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.12□□□□□ -2.07
UBR3Q6ZT12 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC2.12□□□□□ -2.07
UBR3Q6ZT12 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.12□□□□□ -2.07
UBR3Q6ZT12 AL121917.1-203ENST00000605534 577 ntBASIC2.12□□□□□ -2.07
UBR3Q6ZT12 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC2.12□□□□□ -2.07
UBR3Q6ZT12 AP000553.5-201ENST00000641933 54 ntBASIC2.12□□□□□ -2.07
UBR3Q6ZT12 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.12□□□□□ -2.07
UBR3Q6ZT12 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.12□□□□□ -2.07
UBR3Q6ZT12 Z98749.2-208ENST00000381646 500 ntBASIC2.11□□□□□ -2.07
UBR3Q6ZT12 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.11□□□□□ -2.07
UBR3Q6ZT12 HMGB1P12-201ENST00000438594 598 ntBASIC2.11□□□□□ -2.07
UBR3Q6ZT12 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.11□□□□□ -2.07
UBR3Q6ZT12 AC104308.1-201ENST00000454621 333 ntBASIC2.11□□□□□ -2.07
UBR3Q6ZT12 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.11□□□□□ -2.07
UBR3Q6ZT12 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.11□□□□□ -2.07
UBR3Q6ZT12 AL512598.1-201ENST00000610158 273 ntBASIC2.11□□□□□ -2.07
UBR3Q6ZT12 RNA5SP27-201ENST00000363839 119 ntBASIC2.11□□□□□ -2.07
UBR3Q6ZT12 Y_RNA.224-201ENST00000364308 111 ntBASIC2.11□□□□□ -2.07
UBR3Q6ZT12 RNY1P14-201ENST00000384426 108 ntBASIC2.11□□□□□ -2.07
UBR3Q6ZT12 TAS2R15P-201ENST00000390674 928 ntBASIC2.11□□□□□ -2.07
UBR3Q6ZT12 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
UBR3Q6ZT12 DNAJC19P4-201ENST00000440115 345 ntBASIC2.11□□□□□ -2.07
UBR3Q6ZT12 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.11□□□□□ -2.07
UBR3Q6ZT12 AC073901.1-201ENST00000462471 408 ntBASIC2.11□□□□□ -2.07
UBR3Q6ZT12 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.11□□□□□ -2.07
UBR3Q6ZT12 AC087441.2-201ENST00000529141 262 ntBASIC2.11□□□□□ -2.07
UBR3Q6ZT12 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.11□□□□□ -2.07
UBR3Q6ZT12 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.11□□□□□ -2.07
UBR3Q6ZT12 ISCA1P3-201ENST00000577104 373 ntBASIC2.11□□□□□ -2.07
UBR3Q6ZT12 MIR4419B-201ENST00000577260 68 ntBASIC2.11□□□□□ -2.07
UBR3Q6ZT12 MIR4421-201ENST00000578133 69 ntBASIC2.11□□□□□ -2.07
UBR3Q6ZT12 AC013444.2-201ENST00000603317 787 ntBASIC2.11□□□□□ -2.07
UBR3Q6ZT12 AC011890.2-201ENST00000613393 294 ntBASIC2.11□□□□□ -2.07
UBR3Q6ZT12 AC012150.2-201ENST00000621300 544 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms