Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 CEACAMP1-201ENST00000434624 1035 ntBASIC5.72□□□□□ -1.49
USPL1Q5W0Q7 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC5.72□□□□□ -1.49
USPL1Q5W0Q7 TDGF1P1-201ENST00000445734 527 ntBASIC5.72□□□□□ -1.49
USPL1Q5W0Q7 Z95327.1-201ENST00000446082 482 ntBASIC5.72□□□□□ -1.49
USPL1Q5W0Q7 DHFRP3-201ENST00000455595 559 ntBASIC5.72□□□□□ -1.49
USPL1Q5W0Q7 Y_RNA.635-201ENST00000459041 101 ntBASIC5.72□□□□□ -1.49
USPL1Q5W0Q7 AC053481.1-201ENST00000467217 306 ntBASIC5.72□□□□□ -1.49
USPL1Q5W0Q7 AC034236.1-201ENST00000469891 373 ntBASIC5.72□□□□□ -1.49
USPL1Q5W0Q7 AC020893.1-201ENST00000502452 580 ntBASIC5.72□□□□□ -1.49
USPL1Q5W0Q7 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC5.72□□□□□ -1.49
USPL1Q5W0Q7 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC5.72□□□□□ -1.49
USPL1Q5W0Q7 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC5.72□□□□□ -1.49
USPL1Q5W0Q7 RNA5SP503-201ENST00000517047 117 ntBASIC5.72□□□□□ -1.49
USPL1Q5W0Q7 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC5.72□□□□□ -1.49
USPL1Q5W0Q7 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC5.72□□□□□ -1.49
USPL1Q5W0Q7 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC5.72□□□□□ -1.49
USPL1Q5W0Q7 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.72□□□□□ -1.49
USPL1Q5W0Q7 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC5.72□□□□□ -1.49
USPL1Q5W0Q7 AC116312.1-201ENST00000606841 314 ntBASIC5.72□□□□□ -1.49
USPL1Q5W0Q7 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC5.72□□□□□ -1.49
USPL1Q5W0Q7 AC103710.3-201ENST00000608157 948 ntBASIC5.72□□□□□ -1.49
USPL1Q5W0Q7 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC5.72□□□□□ -1.49
USPL1Q5W0Q7 AC006484.1-201ENST00000435086 1884 ntBASIC5.72□□□□□ -1.49
USPL1Q5W0Q7 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.72□□□□□ -1.49
USPL1Q5W0Q7 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
USPL1Q5W0Q7 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
USPL1Q5W0Q7 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
USPL1Q5W0Q7 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.72□□□□□ -1.49
USPL1Q5W0Q7 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
USPL1Q5W0Q7 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.71□□□□□ -1.49
USPL1Q5W0Q7 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
USPL1Q5W0Q7 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
USPL1Q5W0Q7 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
USPL1Q5W0Q7 MTND4P14-201ENST00000435799 1354 ntBASIC5.71□□□□□ -1.5
USPL1Q5W0Q7 LARP1BP1-201ENST00000506036 1359 ntBASIC5.71□□□□□ -1.5
USPL1Q5W0Q7 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.71□□□□□ -1.5
USPL1Q5W0Q7 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
USPL1Q5W0Q7 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
USPL1Q5W0Q7 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
USPL1Q5W0Q7 AP001350.1-201ENST00000601906 1524 ntBASIC5.71□□□□□ -1.5
USPL1Q5W0Q7 MIR372-201ENST00000362225 67 ntBASIC5.71□□□□□ -1.5
USPL1Q5W0Q7 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
USPL1Q5W0Q7 RNU6-1160P-201ENST00000384546 104 ntBASIC5.71□□□□□ -1.5
USPL1Q5W0Q7 RPL23AP38-201ENST00000423801 469 ntBASIC5.71□□□□□ -1.5
USPL1Q5W0Q7 RPS26P47-201ENST00000427219 348 ntBASIC5.71□□□□□ -1.5
USPL1Q5W0Q7 AL132765.1-201ENST00000434165 553 ntBASIC5.71□□□□□ -1.5
USPL1Q5W0Q7 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.71□□□□□ -1.5
USPL1Q5W0Q7 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.71□□□□□ -1.5
USPL1Q5W0Q7 RPL23AP43-201ENST00000446445 471 ntBASIC5.71□□□□□ -1.5
USPL1Q5W0Q7 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.71□□□□□ -1.5
USPL1Q5W0Q7 AC016696.1-201ENST00000446949 318 ntBASIC5.71□□□□□ -1.5
USPL1Q5W0Q7 RPS29P15-201ENST00000458329 171 ntBASIC5.71□□□□□ -1.5
USPL1Q5W0Q7 Y_RNA.631-201ENST00000459607 101 ntBASIC5.71□□□□□ -1.5
USPL1Q5W0Q7 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.71□□□□□ -1.5
USPL1Q5W0Q7 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
USPL1Q5W0Q7 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC5.71□□□□□ -1.5
USPL1Q5W0Q7 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC5.71□□□□□ -1.5
USPL1Q5W0Q7 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC5.71□□□□□ -1.5
USPL1Q5W0Q7 AP001330.4-201ENST00000604350 154 ntBASIC5.71□□□□□ -1.5
USPL1Q5W0Q7 AC245389.1-201ENST00000605141 529 ntBASIC5.71□□□□□ -1.5
USPL1Q5W0Q7 uc_338.15-201ENST00000615470 191 ntBASIC5.71□□□□□ -1.5
USPL1Q5W0Q7 MIR8069-1-201ENST00000616627 86 ntBASIC5.71□□□□□ -1.5
USPL1Q5W0Q7 AC008121.3-201ENST00000618726 433 ntBASIC5.71□□□□□ -1.5
USPL1Q5W0Q7 MIR8069-2-201ENST00000621412 86 ntBASIC5.71□□□□□ -1.5
USPL1Q5W0Q7 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
USPL1Q5W0Q7 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
USPL1Q5W0Q7 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.71□□□□□ -1.5
USPL1Q5W0Q7 AC026523.2-201ENST00000625039 7739 ntBASIC5.71□□□□□ -1.5
USPL1Q5W0Q7 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
USPL1Q5W0Q7 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
USPL1Q5W0Q7 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
USPL1Q5W0Q7 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.71□□□□□ -1.5
USPL1Q5W0Q7 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
USPL1Q5W0Q7 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
USPL1Q5W0Q7 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
USPL1Q5W0Q7 TAB3P1-202ENST00000452645 1634 ntBASIC5.7□□□□□ -1.5
USPL1Q5W0Q7 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.7□□□□□ -1.5
USPL1Q5W0Q7 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
USPL1Q5W0Q7 EIF2AP4-201ENST00000424793 1781 ntBASIC5.7□□□□□ -1.5
USPL1Q5W0Q7 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
USPL1Q5W0Q7 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
USPL1Q5W0Q7 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
USPL1Q5W0Q7 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
USPL1Q5W0Q7 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
USPL1Q5W0Q7 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.7□□□□□ -1.5
USPL1Q5W0Q7 MIR383-201ENST00000362257 73 ntBASIC5.7□□□□□ -1.5
USPL1Q5W0Q7 SNORA62.1-201ENST00000364287 154 ntBASIC5.7□□□□□ -1.5
USPL1Q5W0Q7 Y_RNA.301-201ENST00000364990 103 ntBASIC5.7□□□□□ -1.5
USPL1Q5W0Q7 Y_RNA.414-201ENST00000384011 101 ntBASIC5.7□□□□□ -1.5
USPL1Q5W0Q7 Y_RNA.579-201ENST00000390939 94 ntBASIC5.7□□□□□ -1.5
USPL1Q5W0Q7 AL139095.3-201ENST00000419672 1203 ntBASIC5.7□□□□□ -1.5
USPL1Q5W0Q7 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.7□□□□□ -1.5
USPL1Q5W0Q7 AL353597.2-202ENST00000434901 373 ntBASIC5.7□□□□□ -1.5
USPL1Q5W0Q7 AC004938.1-201ENST00000438468 308 ntBASIC5.7□□□□□ -1.5
USPL1Q5W0Q7 HSFY6P-201ENST00000445573 403 ntBASIC5.7□□□□□ -1.5
USPL1Q5W0Q7 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC5.7□□□□□ -1.5
USPL1Q5W0Q7 AC002553.2-201ENST00000453217 340 ntBASIC5.7□□□□□ -1.5
USPL1Q5W0Q7 AC090096.1-201ENST00000489168 390 ntBASIC5.7□□□□□ -1.5
USPL1Q5W0Q7 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC5.7□□□□□ -1.5
USPL1Q5W0Q7 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms