Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.61□□□□□ -2.15
RIF1Q5UIP0 RNU4-41P-201ENST00000364426 143 ntBASIC1.61□□□□□ -2.15
RIF1Q5UIP0 COX6CP14-201ENST00000469580 174 ntBASIC1.61□□□□□ -2.15
RIF1Q5UIP0 AIG1P1-201ENST00000503376 148 ntBASIC1.61□□□□□ -2.15
RIF1Q5UIP0 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC1.61□□□□□ -2.15
RIF1Q5UIP0 SULT1C2P1-202ENST00000562418 459 ntBASIC1.61□□□□□ -2.15
RIF1Q5UIP0 AL121917.1-203ENST00000605534 577 ntBASIC1.61□□□□□ -2.15
RIF1Q5UIP0 AC010680.1-201ENST00000590024 3590 ntBASIC1.6□□□□□ -2.15
RIF1Q5UIP0 RNU6-60P-201ENST00000364792 103 ntBASIC1.6□□□□□ -2.15
RIF1Q5UIP0 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC1.6□□□□□ -2.15
RIF1Q5UIP0 AC009487.4-201ENST00000624969 3585 ntBASIC1.6□□□□□ -2.15
RIF1Q5UIP0 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
RIF1Q5UIP0 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
RIF1Q5UIP0 RNU1-22P-201ENST00000363334 158 ntBASIC1.6□□□□□ -2.15
RIF1Q5UIP0 RNU1-93P-201ENST00000364704 169 ntBASIC1.6□□□□□ -2.15
RIF1Q5UIP0 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC1.6□□□□□ -2.15
RIF1Q5UIP0 RPS3AP22-201ENST00000488297 769 ntBASIC1.6□□□□□ -2.15
RIF1Q5UIP0 RNA5SP385-201ENST00000515947 110 ntBASIC1.6□□□□□ -2.15
RIF1Q5UIP0 RN7SKP49-201ENST00000516675 260 ntBASIC1.6□□□□□ -2.15
RIF1Q5UIP0 RNA5SP337-201ENST00000517007 109 ntBASIC1.6□□□□□ -2.15
RIF1Q5UIP0 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.6□□□□□ -2.15
RIF1Q5UIP0 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC1.6□□□□□ -2.15
RIF1Q5UIP0 AL845331.3-202ENST00000562856 261 ntBASIC1.6□□□□□ -2.15
RIF1Q5UIP0 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC1.6□□□□□ -2.15
RIF1Q5UIP0 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC1.6□□□□□ -2.15
RIF1Q5UIP0 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC1.6□□□□□ -2.15
RIF1Q5UIP0 AC008687.2-201ENST00000597865 520 ntBASIC1.6□□□□□ -2.15
RIF1Q5UIP0 RMST_6.1-201ENST00000611980 203 ntBASIC1.6□□□□□ -2.15
RIF1Q5UIP0 AC012150.2-201ENST00000621300 544 ntBASIC1.6□□□□□ -2.15
RIF1Q5UIP0 MKKS-204ENST00000639674 192 ntBASIC1.6□□□□□ -2.15
RIF1Q5UIP0 ZNF209P-201ENST00000593450 2304 ntBASIC1.6□□□□□ -2.15
RIF1Q5UIP0 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.6□□□□□ -2.15
RIF1Q5UIP0 RNY1P4-201ENST00000384595 115 ntBASIC1.59□□□□□ -2.15
RIF1Q5UIP0 RNU6-1105P-201ENST00000384774 107 ntBASIC1.59□□□□□ -2.15
RIF1Q5UIP0 EIF1AXP1-201ENST00000419267 435 ntBASIC1.59□□□□□ -2.15
RIF1Q5UIP0 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC1.59□□□□□ -2.15
RIF1Q5UIP0 AC021087.2-201ENST00000504656 1203 ntBASIC1.59□□□□□ -2.15
RIF1Q5UIP0 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.59□□□□□ -2.15
RIF1Q5UIP0 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC1.59□□□□□ -2.15
RIF1Q5UIP0 CYP3A137P-201ENST00000562436 69 ntBASIC1.59□□□□□ -2.15
RIF1Q5UIP0 AC092447.7-201ENST00000422212 1621 ntBASIC1.59□□□□□ -2.16
RIF1Q5UIP0 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC1.59□□□□□ -2.16
RIF1Q5UIP0 RNU6-516P-201ENST00000411381 104 ntBASIC1.59□□□□□ -2.16
RIF1Q5UIP0 SAR1AP4-201ENST00000429225 591 ntBASIC1.59□□□□□ -2.16
RIF1Q5UIP0 AC093331.1-201ENST00000521474 169 ntBASIC1.59□□□□□ -2.16
RIF1Q5UIP0 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC1.59□□□□□ -2.16
RIF1Q5UIP0 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
RIF1Q5UIP0 CBX3P5-201ENST00000552017 521 ntBASIC1.59□□□□□ -2.16
RIF1Q5UIP0 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.59□□□□□ -2.16
RIF1Q5UIP0 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC1.59□□□□□ -2.16
RIF1Q5UIP0 TPMTP1-201ENST00000592307 737 ntBASIC1.59□□□□□ -2.16
RIF1Q5UIP0 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC1.59□□□□□ -2.16
RIF1Q5UIP0 AC012640.5-201ENST00000623897 319 ntBASIC1.59□□□□□ -2.16
RIF1Q5UIP0 CDC27P3-201ENST00000635418 1910 ntBASIC1.59□□□□□ -2.16
RIF1Q5UIP0 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.16
RIF1Q5UIP0 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
RIF1Q5UIP0 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC1.58□□□□□ -2.16
RIF1Q5UIP0 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
RIF1Q5UIP0 RNA5SP160-201ENST00000364866 120 ntBASIC1.58□□□□□ -2.16
RIF1Q5UIP0 IPMKP1-201ENST00000425988 855 ntBASIC1.58□□□□□ -2.16
RIF1Q5UIP0 AC129850.1-201ENST00000436203 508 ntBASIC1.58□□□□□ -2.16
RIF1Q5UIP0 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.58□□□□□ -2.16
RIF1Q5UIP0 HMGB1P26-201ENST00000452520 628 ntBASIC1.58□□□□□ -2.16
RIF1Q5UIP0 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC1.58□□□□□ -2.16
RIF1Q5UIP0 HAR1A.1-201ENST00000459583 118 ntBASIC1.58□□□□□ -2.16
RIF1Q5UIP0 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
RIF1Q5UIP0 AC245036.5-201ENST00000596330 847 ntBASIC1.58□□□□□ -2.16
RIF1Q5UIP0 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
RIF1Q5UIP0 Y_RNA.68-201ENST00000362881 102 ntBASIC1.58□□□□□ -2.16
RIF1Q5UIP0 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
RIF1Q5UIP0 Y_RNA.458-201ENST00000384240 102 ntBASIC1.58□□□□□ -2.16
RIF1Q5UIP0 CD3D-202ENST00000392884 476 ntTSL 2 BASIC1.58□□□□□ -2.16
RIF1Q5UIP0 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC1.58□□□□□ -2.16
RIF1Q5UIP0 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC1.58□□□□□ -2.16
RIF1Q5UIP0 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.58□□□□□ -2.16
RIF1Q5UIP0 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC1.58□□□□□ -2.16
RIF1Q5UIP0 AL031274.2-201ENST00000599419 203 ntBASIC1.58□□□□□ -2.16
RIF1Q5UIP0 AC099778.2-201ENST00000610904 211 ntBASIC1.58□□□□□ -2.16
RIF1Q5UIP0 AC244517.1-201ENST00000606030 2086 ntBASIC1.57□□□□□ -2.16
RIF1Q5UIP0 RPL21P2-201ENST00000440049 481 ntBASIC1.57□□□□□ -2.16
RIF1Q5UIP0 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC1.57□□□□□ -2.16
RIF1Q5UIP0 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.57□□□□□ -2.16
RIF1Q5UIP0 RPL21P18-201ENST00000469899 480 ntBASIC1.57□□□□□ -2.16
RIF1Q5UIP0 RNA5SP476-201ENST00000516613 103 ntBASIC1.57□□□□□ -2.16
RIF1Q5UIP0 GLYCAM1-201ENST00000546596 285 ntBASIC1.57□□□□□ -2.16
RIF1Q5UIP0 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.57□□□□□ -2.16
RIF1Q5UIP0 MIR3618-201ENST00000580330 88 ntBASIC1.57□□□□□ -2.16
RIF1Q5UIP0 AC060766.3-201ENST00000591442 263 ntBASIC1.57□□□□□ -2.16
RIF1Q5UIP0 MIR6733-201ENST00000635723 61 ntBASIC1.57□□□□□ -2.16
RIF1Q5UIP0 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.57□□□□□ -2.16
RIF1Q5UIP0 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
RIF1Q5UIP0 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
RIF1Q5UIP0 MIR6073-201ENST00000352083 89 ntBASIC1.57□□□□□ -2.16
RIF1Q5UIP0 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
RIF1Q5UIP0 SAR1AP2-201ENST00000392696 594 ntBASIC1.57□□□□□ -2.16
RIF1Q5UIP0 BTBD10P2-201ENST00000404779 676 ntBASIC1.57□□□□□ -2.16
RIF1Q5UIP0 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC1.57□□□□□ -2.16
RIF1Q5UIP0 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC1.57□□□□□ -2.16
RIF1Q5UIP0 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
RIF1Q5UIP0 AL353093.1-201ENST00000441292 436 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 167.6 ms